메뉴 건너뛰기




Volumn 18, Issue 11, 2012, Pages 1097-1103

Rapid and accurate identification of genomic species from the Acinetobacter baumannii (Ab) group by MALDI-TOF MS

Author keywords

Acinetobacter; ARDRA; ITS; MALDI TOF MS; recA; Sequence typing

Indexed keywords

ACINETOBACTER BAUMANNII; ACINETOBACTER NOSOCOMIALIS; ACINETOBACTER PITTII; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; GENOMICS; GENOTYPE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; SPECIES IDENTIFICATION;

EID: 84867716424     PISSN: 1198743X     EISSN: 14690691     Source Type: Journal    
DOI: 10.1111/j.1469-0691.2011.03696.x     Document Type: Article
Times cited : (89)

References (30)
  • 1
    • 79956083506 scopus 로고    scopus 로고
    • Clinical impact and molecular basis of antimicrobial resistance in non-baumannii Acinetobacter
    • Espinal P, Roca I, Vila J. Clinical impact and molecular basis of antimicrobial resistance in non-baumannii Acinetobacter. Future Microbiol 2011; 6: 495-511.
    • (2011) Future Microbiol , vol.6 , pp. 495-511
    • Espinal, P.1    Roca, I.2    Vila, J.3
  • 2
    • 47949089607 scopus 로고    scopus 로고
    • Acinetobacter baumannii: emergence of a successful pathogen
    • Peleg AY, Seifert H, Paterson DL. Acinetobacter baumannii: emergence of a successful pathogen. Clin Microbiol Rev 2008; 21: 538-582.
    • (2008) Clin Microbiol Rev , vol.21 , pp. 538-582
    • Peleg, A.Y.1    Seifert, H.2    Paterson, D.L.3
  • 3
    • 79955132142 scopus 로고    scopus 로고
    • Genotypic and phenotypic characterization of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU)
    • Nemec A, Krizova L, Maixnerova M et al. Genotypic and phenotypic characterization of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU). Res Microbiol 2011; 162: 393-404.
    • (2011) Res Microbiol , vol.162 , pp. 393-404
    • Nemec, A.1    Krizova, L.2    Maixnerova, M.3
  • 4
    • 36248932659 scopus 로고    scopus 로고
    • An increasing threat in hospitals: multidrug-resistant Acinetobacter baumannii
    • Dijkshoorn L, Nemec A, Seifert H. An increasing threat in hospitals: multidrug-resistant Acinetobacter baumannii. Nat Rev Microbiol 2007; 5: 939-951.
    • (2007) Nat Rev Microbiol , vol.5 , pp. 939-951
    • Dijkshoorn, L.1    Nemec, A.2    Seifert, H.3
  • 6
    • 77957597513 scopus 로고    scopus 로고
    • Identifying bacteria using a matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometer. Comparison with routine methods used in clinical microbiology laboratories
    • Ferreira L, Vega S, Sánchez-Juanes F et al. Identifying bacteria using a matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometer. Comparison with routine methods used in clinical microbiology laboratories. Enferm Infecc Microbiol Clin 2010; 28: 492-497.
    • (2010) Enferm Infecc Microbiol Clin , vol.28 , pp. 492-497
    • Ferreira, L.1    Vega, S.2    Sánchez-Juanes, F.3
  • 7
    • 0031942068 scopus 로고    scopus 로고
    • Evaluation of amplified ribosomal DNA restriction analysis for identification of Acinetobacter genomic species
    • Dijkshoorn L, Van Harsselaar B, Tjernberg I, Bouvet PJ, Vaneechoutte M. Evaluation of amplified ribosomal DNA restriction analysis for identification of Acinetobacter genomic species. Syst Appl Microbiol 1998; 21: 33-39.
    • (1998) Syst Appl Microbiol , vol.21 , pp. 33-39
    • Dijkshoorn, L.1    Van Harsselaar, B.2    Tjernberg, I.3    Bouvet, P.J.4    Vaneechoutte, M.5
  • 8
    • 0029835362 scopus 로고    scopus 로고
    • Acinetobacter species identification by using tRNA spacer fingerprinting
    • Ehrenstein B, Bernards AT, Dijkshoorn L et al. Acinetobacter species identification by using tRNA spacer fingerprinting. J Clin Microbiol 1996; 34: 2414-2420.
    • (1996) J Clin Microbiol , vol.34 , pp. 2414-2420
    • Ehrenstein, B.1    Bernards, A.T.2    Dijkshoorn, L.3
  • 9
    • 0030760652 scopus 로고    scopus 로고
    • Discrimination of Acinetobacter genomic species by AFLP fingerprinting
    • Janssen P, Maquelin K, Coopman R et al. Discrimination of Acinetobacter genomic species by AFLP fingerprinting. Int J Syst Bacteriol 1997; 47: 1179-1187.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 1179-1187
    • Janssen, P.1    Maquelin, K.2    Coopman, R.3
  • 10
    • 16844367238 scopus 로고    scopus 로고
    • Species-level identification of isolates of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex by sequence analysis of the 16S-23S rRNA gene spacer region
    • Chang HC, Wei YF, Dijkshoorn L et al. Species-level identification of isolates of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex by sequence analysis of the 16S-23S rRNA gene spacer region. J Clin Microbiol 2005; 43: 1632-1639.
    • (2005) J Clin Microbiol , vol.43 , pp. 1632-1639
    • Chang, H.C.1    Wei, Y.F.2    Dijkshoorn, L.3
  • 11
    • 0036128102 scopus 로고    scopus 로고
    • Comparative studies of the Acinetobacter genus and the species identification method based on the recA sequences
    • Krawczyk B, Lewandowski K, Kur J. Comparative studies of the Acinetobacter genus and the species identification method based on the recA sequences. Mol Cell Probes 2002; 16: 1-11.
    • (2002) Mol Cell Probes , vol.16 , pp. 1-11
    • Krawczyk, B.1    Lewandowski, K.2    Kur, J.3
  • 12
    • 69949176864 scopus 로고    scopus 로고
    • Validation of partial rpoB gene sequence analysis for the identification of clinically important and emerging Acinetobacter species
    • Gundi VA, Dijkshoorn L, Burignat S, Raoult D, La Scola B. Validation of partial rpoB gene sequence analysis for the identification of clinically important and emerging Acinetobacter species. Microbiology 2009; 155: 2333-2341.
    • (2009) Microbiology , vol.155 , pp. 2333-2341
    • Gundi, V.A.1    Dijkshoorn, L.2    Burignat, S.3    Raoult, D.4    La Scola, B.5
  • 13
    • 78650063742 scopus 로고    scopus 로고
    • gyrB multiplex PCR to differentiate between Acinetobacter calcoaceticus and Acinetobacter genomic species 3
    • Higgins PG, Lehmann M, Wisplinghoff H, Seifert H. gyrB multiplex PCR to differentiate between Acinetobacter calcoaceticus and Acinetobacter genomic species 3. J Clin Microbiol 2010; 48: 4592-4594.
    • (2010) J Clin Microbiol , vol.48 , pp. 4592-4594
    • Higgins, P.G.1    Lehmann, M.2    Wisplinghoff, H.3    Seifert, H.4
  • 14
    • 79951837968 scopus 로고    scopus 로고
    • Influence of genospecies of Acinetobacter baumannii complex on clinical outcomes of patients with acinetobacter bacteremia
    • Chuang YC, Sheng WH, Li SY et al. Influence of genospecies of Acinetobacter baumannii complex on clinical outcomes of patients with acinetobacter bacteremia. Clin Infect Dis 2011; 52: 352-360.
    • (2011) Clin Infect Dis , vol.52 , pp. 352-360
    • Chuang, Y.C.1    Sheng, W.H.2    Li, S.Y.3
  • 15
    • 33947249894 scopus 로고    scopus 로고
    • Distinct antimicrobial resistance patterns and antimicrobial resistance-harboring genes according to genomic species of Acinetobacter isolates
    • Lim YM, Shin KS, Kim J. Distinct antimicrobial resistance patterns and antimicrobial resistance-harboring genes according to genomic species of Acinetobacter isolates. J Clin Microbiol 2007; 45: 902-905.
    • (2007) J Clin Microbiol , vol.45 , pp. 902-905
    • Lim, Y.M.1    Shin, K.S.2    Kim, J.3
  • 16
    • 79956271697 scopus 로고    scopus 로고
    • Use of the MALDI BioTyper system with MALDI-TOF mass spectrometry for rapid identification of microorganisms
    • Sogawa K, Watanabe M, Sato K et al. Use of the MALDI BioTyper system with MALDI-TOF mass spectrometry for rapid identification of microorganisms. Anal Bioanal Chem 2011; 400: 1905-1911.
    • (2011) Anal Bioanal Chem , vol.400 , pp. 1905-1911
    • Sogawa, K.1    Watanabe, M.2    Sato, K.3
  • 17
    • 85027939877 scopus 로고    scopus 로고
    • Revisited distribution of nonfermenting Gram-negative bacilli clinical isolates
    • Epub ahead of print]. doi: 10.1007/s10096-011-1263-5.
    • Jacquier H, Carbonnelle E, Corvec S et al. Revisited distribution of nonfermenting Gram-negative bacilli clinical isolates. Eur J Clin Microbiol Infect Dis 2011; [Epub ahead of print]. doi: 10.1007/s10096-011-1263-5.
    • (2011) Eur J Clin Microbiol Infect Dis
    • Jacquier, H.1    Carbonnelle, E.2    Corvec, S.3
  • 18
    • 77950625408 scopus 로고    scopus 로고
    • Acinetobacter bereziniae sp. nov. and Acinetobacter guillouiae sp. nov., to accommodate Acinetobacter genomic species 10 and 11, respectively
    • Nemec A, Musilek M, Sedo O et al. Acinetobacter bereziniae sp. nov. and Acinetobacter guillouiae sp. nov., to accommodate Acinetobacter genomic species 10 and 11, respectively. Int J Syst Evol Microbiol 2010; 60: 896-903.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 896-903
    • Nemec, A.1    Musilek, M.2    Sedo, O.3
  • 19
    • 79951673092 scopus 로고    scopus 로고
    • Optimization of mass spectral features in MALDI-TOF MS profiling of Acinetobacter species
    • Sedo O, Vorac A, Zdrahal Z. Optimization of mass spectral features in MALDI-TOF MS profiling of Acinetobacter species. Syst Appl Microbiol 2011; 34: 30-34.
    • (2011) Syst Appl Microbiol , vol.34 , pp. 30-34
    • Sedo, O.1    Vorac, A.2    Zdrahal, Z.3
  • 20
    • 0029133709 scopus 로고
    • Genomic species typing of acinetobacters by polymerase chain reaction amplification of the recA gene
    • Nowak A, Kur J. Genomic species typing of acinetobacters by polymerase chain reaction amplification of the recA gene. FEMS Microbiol Lett 1995; 130: 327-332.
    • (1995) FEMS Microbiol Lett , vol.130 , pp. 327-332
    • Nowak, A.1    Kur, J.2
  • 21
    • 35948950180 scopus 로고    scopus 로고
    • High prevalence of carbapenem-hydrolysing oxacillinases in epidemiologically related and unrelated Acinetobacter baumannii clinical isolates in Spain
    • Ruíz M, Martí S, Fernández-Cuenca F, Pascual A, Vila J. High prevalence of carbapenem-hydrolysing oxacillinases in epidemiologically related and unrelated Acinetobacter baumannii clinical isolates in Spain. Clin Microbiol Infect 2007; 13: 1192-1198.
    • (2007) Clin Microbiol Infect , vol.13 , pp. 1192-1198
    • Ruíz, M.1    Martí, S.2    Fernández-Cuenca, F.3    Pascual, A.4    Vila, J.5
  • 22
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • doi: 10.1093/molbev/msr121.
    • Tamura K, Peterson D, Peterson N et al. MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Mol Biol Evol 2011; 28: 2731-2739. doi: 10.1093/molbev/msr121.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3
  • 23
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 2004; 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 24
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980; 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 26
    • 33645940592 scopus 로고    scopus 로고
    • Nosocomial bacteremia due to an as yet unclassified Acinetobacter genomic species 17-like strain
    • Rodríguez-Baño J, Martí S, Ribera A et al. Nosocomial bacteremia due to an as yet unclassified Acinetobacter genomic species 17-like strain. J Clin Microbiol 2006; 44: 1587-1589.
    • (2006) J Clin Microbiol , vol.44 , pp. 1587-1589
    • Rodríguez-Baño, J.1    Martí, S.2    Ribera, A.3
  • 27
    • 0024308040 scopus 로고
    • Delineation of new proteolytic genomic species in the genus Acinetobacter
    • Bouvet PJ, Jeanjean S. Delineation of new proteolytic genomic species in the genus Acinetobacter. Res Microbiol 1989; 140: 291-299.
    • (1989) Res Microbiol , vol.140 , pp. 291-299
    • Bouvet, P.J.1    Jeanjean, S.2
  • 28
    • 0024402653 scopus 로고
    • Clinical strains of Acinetobacter classified by DNA-DNA hybridization
    • Tjernberg I, Ursing J. Clinical strains of Acinetobacter classified by DNA-DNA hybridization. APMIS 1989; 97: 595-605.
    • (1989) APMIS , vol.97 , pp. 595-605
    • Tjernberg, I.1    Ursing, J.2
  • 29
    • 84856259398 scopus 로고    scopus 로고
    • Acinetobacter calcoaceticus-Acinetobacter baumannii complex species in clinical specimens in Singapore
    • Epub ahead of print]. doi: 10.1017/s0950268811001129.
    • Koh TH, Tan TT, Khoo CT et al. Acinetobacter calcoaceticus-Acinetobacter baumannii complex species in clinical specimens in Singapore. Epidemiol Infect 2011; [Epub ahead of print]. doi: 10.1017/s0950268811001129.
    • (2011) Epidemiol Infect
    • Koh, T.H.1    Tan, T.T.2    Khoo, C.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.