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Volumn 4, Issue 3, 2012, Pages 811-814

Development and characterization of 15 polymorphic microsatellite loci in Sonneratia alba (Lythraceae) using next-generation sequencing

(21)  Shinmura, Yoshimi a   Wee, Alison K S b   Takayama, Koji c   Asakawa, Takeshi a   Yllano, Orlex Baylen d   Salmo III, Severino G e   Ardli, Erwin Riyanto f   Tung, Nguyen Xuan g   Malekal, Norhaslinda Binti h   Onrizal, i   Meenakshisundaram, Sankararamasubramanian Halasya j   Sungkaew, Sarawood k   Saleh, M Nazre l   Adjie, Bayu m   Soe, Khin Khin n   Oguri, Emiko o   Murakami, Noriaki o   Watano, Yasuyuki a   Baba, Shigeyuki p   Webb, Edward L b   more..


Author keywords

Conservation; Diversity; Mangrove; Pyrosequencing; SSR

Indexed keywords


EID: 84867589152     PISSN: 18777252     EISSN: 18777260     Source Type: Journal    
DOI: 10.1007/s12686-012-9650-5     Document Type: Article
Times cited : (5)

References (17)
  • 1
    • 84971098611 scopus 로고
    • Sibling species in the mangrove genus Ceriops (Rhizophoraceae), detected using biochemical genetics
    • Ballment ER, Smith TJ III, Stoddart JA (1988) Sibling species in the mangrove genus Ceriops (Rhizophoraceae), detected using biochemical genetics. Aust Syst Bot 1: 391-397.
    • (1988) Aust Syst Bot , vol.1 , pp. 391-397
    • Ballment, E.R.1    Smith III, T.J.2    Stoddart, J.A.3
  • 2
    • 0001506104 scopus 로고    scopus 로고
    • Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping
    • Brownstein M, Carpten J, Smith J (1996) Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping. Biotechniques 20(1004-1006): 1008-1010.
    • (1996) Biotechniques , vol.20 , Issue.1004-1006 , pp. 1008-1010
    • Brownstein, M.1    Carpten, J.2    Smith, J.3
  • 3
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19: 11-15.
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 5
    • 39049165704 scopus 로고    scopus 로고
    • Mangrove forest distributions and dynamics (1975-2005) of the tsunami-affected region of Asia
    • Giri C, Zhu A, Tieszen LL, Singh A, Gillette S, Kelmelis JA (2008) Mangrove forest distributions and dynamics (1975-2005) of the tsunami-affected region of Asia. J Biogeogr 35: 519-528.
    • (2008) J Biogeogr , vol.35 , pp. 519-528
    • Giri, C.1    Zhu, A.2    Tieszen, L.L.3    Singh, A.4    Gillette, S.5    Kelmelis, J.A.6
  • 7
    • 24044455869 scopus 로고    scopus 로고
    • Genome sequencing in microfabricated high-density picolitre reactors
    • Margulies M, Egholm M, Altman WE et al (2005) Genome sequencing in microfabricated high-density picolitre reactors. Nature 437: 376-380.
    • (2005) Nature , vol.437 , pp. 376-380
    • Margulies, M.1    Egholm, M.2    Altman, W.E.3
  • 8
    • 77949515434 scopus 로고    scopus 로고
    • QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects
    • Meglécz E, Costedoat C, Dubut V, Gilles A, Malausa T, Pech N, Martin J-F (2010) QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects. Bioinformatics 26: 403-404.
    • (2010) Bioinformatics , vol.26 , pp. 403-404
    • Meglécz, E.1    Costedoat, C.2    Dubut, V.3    Gilles, A.4    Malausa, T.5    Pech, N.6    Martin, J.-F.7
  • 9
    • 77956259222 scopus 로고    scopus 로고
    • The loss of species: mangrove extinction risk and geographic areas of global concern
    • doi:10.1371/journal.pone.0010095
    • Polidoro BA, Carpenter KE, Collins L et al (2010) The loss of species: mangrove extinction risk and geographic areas of global concern. PLoS ONE 5(4): 1-10. doi: 10. 1371/journal. pone. 0010095.
    • (2010) PLoS ONE , vol.5 , Issue.4 , pp. 1-10
    • Polidoro, B.A.1    Carpenter, K.E.2    Collins, L.3
  • 10
    • 0000262278 scopus 로고
    • GENEPOP (Version 1.2): Population genetics software for exact tests and ecumenicism
    • Raymond M, Rousset F (1995) GENEPOP (Version 1. 2): Population genetics software for exact tests and ecumenicism. J Hered 86: 248-249.
    • (1995) J Hered , vol.86 , pp. 248-249
    • Raymond, M.1    Rousset, F.2
  • 11
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • S. Misener and S. A. Krawetz (Eds.), New York: Humana Press
    • Rozen S, Skaletsky H (1999) Primer3 on the WWW for general users and for biologist programmers. In: Misener S, Krawetz SA (eds) Bioinformatics methods and protocols. Humana Press, New York, pp 365-386.
    • (1999) Bioinformatics Methods and Protocols , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 12
    • 0033953635 scopus 로고    scopus 로고
    • An economic method for the fluorescent labeling of PCR fragments
    • Schuelke M (2000) An economic method for the fluorescent labeling of PCR fragments. Nat Biotech 18: 233-234.
    • (2000) Nat Biotech , vol.18 , pp. 233-234
    • Schuelke, M.1
  • 13
    • 0038785543 scopus 로고    scopus 로고
    • Kandelia obovata (Rhizophoraceae), a new mangrove species from Eastern Asia
    • Sheue CR, Liu HY, Yong JWH (2003) Kandelia obovata (Rhizophoraceae), a new mangrove species from Eastern Asia. Taxon 52: 287-294.
    • (2003) Taxon , vol.52 , pp. 287-294
    • Sheue, C.R.1    Liu, H.Y.2    Yong, J.W.H.3
  • 15
    • 80054943903 scopus 로고    scopus 로고
    • A simple and cost-effective approach for microsatellite isolation in non-model plant species using small-scale 454 pyrosequencing
    • Takayama K, Lopez PS, Konig C, Kohl G, Novak J, Stuessy TF (2011) A simple and cost-effective approach for microsatellite isolation in non-model plant species using small-scale 454 pyrosequencing. Taxon 60: 1442-1449.
    • (2011) Taxon , vol.60 , pp. 1442-1449
    • Takayama, K.1    Lopez, P.S.2    Konig, C.3    Kohl, G.4    Novak, J.5    Stuessy, T.F.6
  • 16
    • 46549087339 scopus 로고    scopus 로고
    • Molecular ecology and biogeography of mangrove trees towards conceptual insights on gene flow and barriers: a review
    • Triest L (2008) Molecular ecology and biogeography of mangrove trees towards conceptual insights on gene flow and barriers: a review. Aquat Bot 89: 138-154.
    • (2008) Aquat Bot , vol.89 , pp. 138-154
    • Triest, L.1
  • 17
    • 4344606590 scopus 로고    scopus 로고
    • Micro-checker: software for identifying and correcting genotyping errors in microsatellite data
    • van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.
    • (2004) Mol Ecol Notes , vol.4 , pp. 535-538
    • van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3    Shipley, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.