메뉴 건너뛰기




Volumn 25, Issue 11, 2012, Pages 1506-1517

FxkR provides the missing link in the fixl-fixk signal transduction cascade in Rhizobium etli CFN42

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN;

EID: 84867340610     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI-05-12-0136-R     Document Type: Article
Times cited : (21)

References (54)
  • 1
    • 0025969319 scopus 로고
    • The regulatory status of the fixL-like and fixJ-like genes in Bradyrhizobium japonicum may be different from that in Rhizobium meliloti
    • Anthamatten, D., and Hennecke, H. 1991. The regulatory status of the fixL-like and fixJ-like genes in Bradyrhizobium japonicum may be different from that in Rhizobium meliloti. Mol. Gen. Genet. 225:38-48.
    • (1991) Mol. Gen. Genet. , vol.225 , pp. 38-48
    • Anthamatten, D.1    Hennecke, H.2
  • 2
    • 0026573942 scopus 로고
    • Characterization of a fixLJ-regulated Bradyrhizobium japonicum gene sharing similarity with the Escherichia coli fnr and Rhizobium meliloti fixK genes
    • Anthamatten, D., Scherb, B., and Hennecke, H. 1992. Characterization of a fixLJ-regulated Bradyrhizobium japonicum gene sharing similarity with the Escherichia coli fnr and Rhizobium meliloti fixK genes. J. Bacteriol. 174:2111-2120.
    • (1992) J. Bacteriol. , vol.174 , pp. 2111-2120
    • Anthamatten, D.1    Scherb, B.2    Hennecke, H.3
  • 3
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • Bailey, T. L., and Elkan, C. 1994 Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2:28-36
    • (1994) Proc. Int. Conf. Intell. Syst. Mol. Biol. , vol.2 , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2
  • 4
    • 78651282059 scopus 로고    scopus 로고
    • P2CS: A database of prokaryotic two-component systems
    • Barakat, M., Ortet, P., and Whitworth, D. E. 2011. P2CS: a database of prokaryotic two-component systems. Nucleic Acids Res. 39:D771-D776.
    • (2011) Nucleic Acids Res. , vol.39
    • Barakat, M.1    Ortet, P.2    Whitworth, D.E.3
  • 5
    • 0024445091 scopus 로고
    • FixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti
    • Batut, J., Daveran-Mingot, M. L., David, M., Jacobs, J., Garnerone, A. M., and Kahn, D. 1989. fixK, a gene homologous with fnr and crp from Escherichia coli, regulates nitrogen fixation genes both positively and negatively in Rhizobium meliloti. EMBO (Eur. Mol. Biol. Organ.) J. 8:1279-1286. (Pubitemid 19273293)
    • (1989) EMBO Journal , vol.8 , Issue.4 , pp. 1279-1286
    • Batut, J.1    Daveran-Mingot, M.-L.2    David, M.3    Jacobs, J.4    Garnerone, A.M.5    Kahn, D.6
  • 6
    • 0031858562 scopus 로고    scopus 로고
    • Expression of the fixR-nifA operon in Bradyrhizobium japonicum depends on a new response regulator, RegR
    • Bauer, E., Kaspar, T., Fischer, H. M., and Hennecke, H. 1998. Expression of the fixR-nifA operon in Bradyrhizobium japonicum depends on a new response regulator, RegR. J. Bacteriol. 180:3853-3863. (Pubitemid 28361581)
    • (1998) Journal of Bacteriology , vol.180 , Issue.15 , pp. 3853-3863
    • Bauer, E.1    Kaspar, T.2    Fischer, H.-M.3    Hennecke, H.4
  • 7
    • 0020609336 scopus 로고
    • Isolation and characterization of the recA gene of Rhizobium meliloti
    • Better, M., and Helinski, D. P. 1983. Isolation and characterization of a recA gene of Rhizobium meliloti. J. Bacteriol. 115:311-316. (Pubitemid 13070627)
    • (1983) Journal of Bacteriology , vol.155 , Issue.1 , pp. 311-316
    • Better, M.1    Helinski, D.R.2
  • 8
    • 9144235764 scopus 로고    scopus 로고
    • The C-terminal receiver domain of the Rhizobium leguminosarum bv. viciae FixL protein is required for free-living microaerobic induction of the fnrN promoter
    • DOI 10.1099/mic.0.27323-0
    • Boesten, B., and Priefer, U. B. 2004. The C-terminal receiver domain of the Rhizobium leguminosarum bv. viciae FixL protein is required for free-living microaerobic induction of the fnrN promoter. Microbiology 150:3703-3713. (Pubitemid 39545317)
    • (2004) Microbiology , vol.150 , Issue.11 , pp. 3703-3713
    • Boesten, B.1    Priefer, U.B.2
  • 9
    • 78650239608 scopus 로고    scopus 로고
    • Regulation of the phototrophic iron oxidation (pio) genes in Rhodopseudomonas palustris TIE-1 is mediated by the global regulator, FixK
    • Bose, A., and Newman, D. K. 2011. Regulation of the phototrophic iron oxidation (pio) genes in Rhodopseudomonas palustris TIE-1 is mediated by the global regulator, FixK. Mol. Microbiol. 79:63-75.
    • (2011) Mol. Microbiol. , vol.79 , pp. 63-75
    • Bose, A.1    Newman, D.K.2
  • 10
    • 0023957787 scopus 로고
    • Ammonium assimilation in Rhizobium phaseoli by the glutamine synthetase-glutamate synthase pathway
    • Bravo, A., and Mora, J. 1988. Ammonium assimilation in Rhizobium phaseoli by the glutamine synthetase-glutamate synthase pathway. J. Bacteriol. 170:980-984.
    • (1988) J. Bacteriol. , vol.170 , pp. 980-984
    • Bravo, A.1    Mora, J.2
  • 12
    • 0026744773 scopus 로고
    • Different plasmids of Rhizobium leguminosarum bv. phaseoli are required for optimal symbiotic performance
    • Brom, S., García de los Santos, A., Stepkowsky, T., Flores, M., Dávila, G., Romero, D., and Palacios, R. 1992. Different plasmids of Rhizobium leguminosarum bv. phaseoli are required for optimal symbiotic performance. J. Bacteriol. 174:5183-5189.
    • (1992) J. Bacteriol. , vol.174 , pp. 5183-5189
    • Brom, S.1    Santos, G.A.2    Stepkowsky, T.3    Flores, M.4    Dávila, G.5    Romero, D.6    Palacios, R.7
  • 13
    • 0343962608 scopus 로고    scopus 로고
    • In Rhizobium etli symbiotic plasmid transfer, nodulation competitivity and cellular growth require interaction among different replicons
    • DOI 10.1006/plas.2000.1469
    • Brom, S., García-de los Santos, A., Cervantes, L., Palacios, R., and Romero, D. 2000. In Rhizobium etli symbiotic plasmid transfer, nodulation competitivity and cellular growth require interaction among different replicons. Plasmid 44:34-43. (Pubitemid 30470288)
    • (2000) Plasmid , vol.44 , Issue.1 , pp. 34-43
    • Brom, S.1    Garcia-De Los Santos, A.2    Cervantes, L.3    Palacios, R.4    Romero, D.5
  • 15
    • 1242269905 scopus 로고    scopus 로고
    • 3 oxidase complex in bacteria
    • DOI 10.1007/s00203-003-0641-5
    • Cosseau, C., and Batut, J. 2004. Genomics of the ccoNOQP-encoded cbb3 oxidase complex in bacteria. Arch. Microbiol. 181:89-96. (Pubitemid 38221644)
    • (2004) Archives of Microbiology , vol.181 , Issue.2 , pp. 89-96
    • Cosseau, C.1    Batut, J.2
  • 18
    • 4344704870 scopus 로고    scopus 로고
    • Genetic regulation of biological nitrogen fixation
    • DOI 10.1038/nrmicro954
    • Dixon, R., and Kahn, D. 2004. Genetic regulation of biological nitrogen fixation. Nat. Rev. Microbiol. 2:621-631. (Pubitemid 39200045)
    • (2004) Nature Reviews Microbiology , vol.2 , Issue.8 , pp. 621-631
    • Dixon, R.1    Kahn, D.2
  • 19
    • 0037663697 scopus 로고    scopus 로고
    • A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure
    • DOI 10.1021/bi0343370
    • Dunham, C. M., Dioum, E. M., Tuckerman, J. R., Gonzalez, G., Scott, W. G., and Gilles-Gonzalez, M. A. 2003. A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure. Biochemistry 42:7701-7708. (Pubitemid 36758935)
    • (2003) Biochemistry , vol.42 , Issue.25 , pp. 7701-7708
    • Dunham, C.M.1    Dioum, E.M.2    Tuckerman, J.R.3    Gonzalez, G.4    Scott, W.G.5    Gilles-Gonzalez, M.-A.6
  • 20
    • 0037165634 scopus 로고    scopus 로고
    • Two distinct classes of FixJ binding sites defined by in vitro selection
    • DOI 10.1016/S0014-5793(02)02618-2, PII S0014579302026182
    • Ferrières, L., and Kahn, D. 2002. Two distinct classes of FixJ binding sites defined by in vitro selection. FEBS (Fed. Eur. Biochem. Soc.) Lett. 517:185-189. (Pubitemid 34327656)
    • (2002) FEBS Letters , vol.517 , Issue.1-3 , pp. 185-189
    • Ferrieres, L.1    Kahn, D.2
  • 23
    • 0028108941 scopus 로고
    • Genetic regulation of nitrogen fixation in rhizobia
    • Fischer, H. M. 1994. Genetic regulation of nitrogen fixation in rhizobia. Microbiol. Rev. 58:352-386.
    • (1994) Microbiol. Rev. , vol.58 , pp. 352-386
    • Fischer, H.M.1
  • 24
    • 0043122944 scopus 로고    scopus 로고
    • ExPASy: The proteomics server for in-depth protein knowledge and analysis
    • DOI 10.1093/nar/gkg563
    • Gasteiger, E., Gattiker, A., Hoogland, C., Ivanyi, I., Appel, R. D., and Bairoch, A. 2003. ExPASy: the proteomics server for in-depth protein knowledge and analysis. Nucleic Acids Res. 31:3784-3788. (Pubitemid 37442246)
    • (2003) Nucleic Acids Research , vol.31 , Issue.13 , pp. 3784-3788
    • Gasteiger, E.1    Gattiker, A.2    Hoogland, C.3    Ivanyi, I.4    Appel, R.D.5    Bairoch, A.6
  • 25
    • 0027219226 scopus 로고
    • Regulation of the kinase activity of heme protein FixL from the two- component system FixL/FixJ of Rhizobium meliloti
    • Gilles-Gonzalez, M. A., and Gonzalez, G. 1993. Regulation of the kinase activity of heme protein FixL from the two-component system FixL/FixJ of Rhizobium meliloti. J. Biol. Chem. 268:16293-16297. (Pubitemid 23229929)
    • (1993) Journal of Biological Chemistry , vol.268 , Issue.22 , pp. 16293-16297
    • Gilles-Gonzalez, M.A.1    Gonzalez, G.2
  • 26
    • 0029944901 scopus 로고    scopus 로고
    • Transcriptional activity of the symbiotic plasmid of Rhizobium etli is affected by different environmental conditions
    • Girard, L., Valderrama, B., Palacios, R., Romero, D., and Dávila, G. 1996. Transcriptional activity of the symbiotic plasmid of Rhizobium etli is affected by different environmental conditions. Microbiology 142:2647-2856.
    • (1996) Microbiology , vol.142 , pp. 2647-2856
    • Girard, L.1    Valderrama, B.2    Palacios, R.3    Romero, D.4    Dávila, G.5
  • 27
    • 0033676586 scopus 로고    scopus 로고
    • Differential regulation of fixN-reiterated genes in Rhizobium etli by a novel fixL-fixK cascade
    • Girard, L., Brom, S., Dávalos, A., López, O., Soberón, M., and Romero, D. 2000. Differential regulation of fixN-reiterated genes in Rhizobium etli by a novel fixL-fixK cascade. Mol. Plant-Microbe Interact. 13:1283-1292.
    • (2000) Mol. Plant-microbe Interact. , vol.13 , pp. 1283-1292
    • Girard, L.1    Brom, S.2    Dávalos, A.3    López, O.4    Soberón, M.5    Romero, D.6
  • 33
    • 0025348289 scopus 로고
    • Two plasmids other than the nodulation plasmid are necessary for formation of nitrogen-fixing nodules by Rhizobium leguminosarum
    • Hynes, M. F., and McGregor, N. F. 1990. Two plasmids other than the nodulation plasmid are necessary for formation of nitrogen-fixing nodules by Rhizobium leguminosarum. Mol. Microbiol. 4:567-574.
    • (1990) Mol. Microbiol. , vol.4 , pp. 567-574
    • Hynes, M.F.1    McGregor, N.F.2
  • 34
    • 0001423856 scopus 로고
    • Melanin production encoded by a cryptic plasmid in a Rhizobium leguminosarum strain
    • Hynes, M. F., Brucksch, K., and Priefer, U. 1988. Melanin production encoded by a cryptic plasmid in a Rhizobium leguminosarum strain. Arch. Microbiol. 150:326-332.
    • (1988) Arch. Microbiol. , vol.150 , pp. 326-332
    • Hynes, M.F.1    Brucksch, K.2    Priefer, U.3
  • 35
    • 0016605870 scopus 로고
    • Identification of the Rhizobium 749 strains in pea root nodules using genetic markers
    • Johnston, A. W., and Beringer, J. E. 1975. Identification of the Rhizobium 749 strains in pea root nodules using genetic markers. J. Gen. Microbiol. 87:343-350.
    • (1975) J. Gen. Microbiol. , vol.87 , pp. 343-350
    • Johnston, A.W.1    Beringer, J.E.2
  • 36
    • 0000432467 scopus 로고    scopus 로고
    • A survey of symbiotic nitrogen fixation by Rhizobia
    • H. P. Spaink, A. Kondorosi, and P. J. J. Hooykaas, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Kaminski, P. A., Batut, J., and Boistard, P. 1998. A survey of symbiotic nitrogen fixation by Rhizobia. Pages 431-460 in: The Rhizobiaceae: Molecular Biology of Model Plant-Associated Bacteria. H. P. Spaink, A. Kondorosi, and P. J. J. Hooykaas, eds. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1998) The Rhizobiaceae: Molecular Biology of Model Plant-associated Bacteria , pp. 431-460
    • Kaminski, P.A.1    Batut, J.2    Boistard, P.3
  • 37
    • 0023715368 scopus 로고
    • Improved broad-host-range plasmids for DNA cloning in Gram-negative bacteria
    • DOI 10.1016/0378-1119(88)90117-5
    • Keen, N. T., Tamaki, S., Kobayashi, D., and Trollinger, D. 1988. Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria. Gene 70:191-197. (Pubitemid 18263496)
    • (1988) Gene , vol.70 , Issue.1 , pp. 191-197
    • Keen, N.T.1    Tamaki, S.2    Kobayashi, D.3    Trollinger, D.4
  • 40
    • 58149194624 scopus 로고    scopus 로고
    • SMART 6: Recent updates and new developments
    • Letunic, I., Doerks, T., and Bork, P. 2009. SMART 6: recent updates and new developments. Nucleic Acids Res. 37:D229-232.
    • (2009) Nucleic Acids Res. , vol.37
    • Letunic, I.1    Doerks, T.2    Bork, P.3
  • 41
    • 0035212666 scopus 로고    scopus 로고
    • Regulation of gene expression in response to oxygen in Rhizobium etli: Role of FnrN in fixNOQP expression and in symbiotic nitrogen fixation
    • DOI 10.1128/JB.183.24.6999-7006.2001
    • Lopez, O., Morera, C., Miranda-Rios, J., Girard, L., Romero, D., and Soberón, M. 2001. Regulation of gene expression in response to oxygen in Rhizobium etli: role of FnrN in fixNOQP expression and in symbiotic nitrogen fixation. J. Bacteriol. 183:6999-7006. (Pubitemid 33121831)
    • (2001) Journal of Bacteriology , vol.183 , Issue.24 , pp. 6999-7006
    • Lopez, O.1    Morera, C.2    Miranda-Rios, J.3    Girard, L.4    Romero, D.5    Soberon, M.6
  • 43
    • 0343339904 scopus 로고    scopus 로고
    • Role of the ruvB gene in homologous and homeologous recombination in Rhizobium etli
    • DOI 10.1016/S0378-1119(99)00548-X, PII S037811199900548X
    • Martínez-Salazar, J. M., and Romero, D. 2000. Role of the ruvB gene in homologous and homeologous recombination in Rhizobium etli. Gene 243:125-131. (Pubitemid 30079712)
    • (2000) Gene , vol.243 , Issue.1-2 , pp. 125-131
    • Martinez-Salazar, J.M.1    Romero, D.2
  • 44
    • 0020058862 scopus 로고
    • Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis
    • Meade, H. M., Long, S. R., Ruvkun, G. B., Brown, S. E., and Ausubel, F. M. 1982. Physical and genetic characterization of symbiotic and auxotrophic mutants of Rhizobium meliloti induced by transposon Tn5 mutagenesis. J. Bacteriol. 149:114-122. (Pubitemid 12191338)
    • (1982) Journal of Bacteriology , vol.149 , Issue.1 , pp. 114-122
    • Meade, H.M.1    Long, S.R.2    Ruvkun, G.B.3
  • 45
    • 0021191671 scopus 로고
    • Rhizobium phaseoli symbiotic mutants with transposon Tn5 insertions
    • Noel, K. D., Sanchez, A., Fernandez, L., Leemans, J., and Cevallos, M. A. 1984 Rhizobium phaseoli symbiotic mutants with transposon Tn5 insertions. J. Bacteriol. 158:148-155. (Pubitemid 14127487)
    • (1984) Journal of Bacteriology , vol.158 , Issue.1 , pp. 148-155
    • Noel, K.D.1    Sanchez, A.2    Fernandez, L.3
  • 46
    • 34147146357 scopus 로고    scopus 로고
    • Global regulation of photosynthesis and respiration by FnrL: The first two targets in the tetrapyrrole pathway
    • DOI 10.1074/jbc.M605985200
    • Ouchane, S., Picaud, M., Therizols, P., Reiss-Husson, F., and Astier, C. 2007. Global regulation of photosynthesis and respiration by FnrL: the first two targets in the tetrapyrrole pathway. J. Biol. Chem. 282:7690-7699. (Pubitemid 47093650)
    • (2007) Journal of Biological Chemistry , vol.282 , Issue.10 , pp. 7690-7699
    • Ouchane, S.1    Picaud, M.2    Therizols, P.3    Reiss-Husson, F.4    Astier, C.5
  • 47
    • 0029762460 scopus 로고    scopus 로고
    • Rhizobium leguminosarum bv. viciae contains a second fnr/fixK-like gene and an unusual fixL homologue
    • Patschkowski, T., Schlüter, A., and Priefer, U. B. 1996. Rhizobium leguminosarum bv. viciae contains a second fnr/fixK-like gene and an unusual fixL homologue. Mol. Microbiol. 21:267-280. (Pubitemid 26291533)
    • (1996) Molecular Microbiology , vol.21 , Issue.2 , pp. 267-280
    • Patschkowski, T.1    Schluter, A.2    Priefer, U.B.3
  • 48
    • 76449108491 scopus 로고    scopus 로고
    • FixK, a global regulator of microaerobic growth, controls photosynthesis in Rhodopseudomonas palustris
    • Rey, F. E., and Harwood, C. S. 2010. FixK, a global regulator of microaerobic growth, controls photosynthesis in Rhodopseudomonas palustris. Mol. Microbiol. 75:1007-1020.
    • (2010) Mol. Microbiol. , vol.75 , pp. 1007-1020
    • Rey, F.E.1    Harwood, C.S.2
  • 50
    • 0028289983 scopus 로고
    • Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: Selection of defined deletions in the chromosome of Corynebacterium glutamicum
    • DOI 10.1016/0378-1119(94)90324-7
    • Schäfer, A., Tauch, A., Jäger, W., Kalinowski, J., Thierbach, G., and Pühler, A. 1994. Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene 145:69-73. (Pubitemid 24224965)
    • (1994) Gene , vol.145 , Issue.1 , pp. 69-73
    • Schafer, A.1    Tauch, A.2    Jager, W.3    Kalinowski, J.4    Thierbach, G.5    Puhler, A.6
  • 53
    • 33745219470 scopus 로고    scopus 로고
    • Transcription regulation of ompF and ompC by a single transcription factor, OmpR
    • Yoshida, T., Qin, L., Egger, L. A., and Inouye, M. 2006. Transcription regulation of ompF and ompC by a single transcription factor, OmpR. J. Biol. Chem. 281:17114-17123.
    • (2006) J. Biol. Chem. , vol.281 , pp. 17114-17123
    • Yoshida, T.1    Qin, L.2    Egger, L.A.3    Inouye, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.