메뉴 건너뛰기




Volumn 6, Issue 4, 2011, Pages

Regulatory response to carbon starvation in caulobacter crescentus

Author keywords

[No Author keywords available]

Indexed keywords

CARBON; CTRA PROTEIN; HEAVY METAL; REGULATOR PROTEIN; SIGMA FACTOR; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR FIXK; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; MESSENGER RNA; PROTEOME;

EID: 79954478407     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0018179     Document Type: Article
Times cited : (63)

References (79)
  • 1
    • 0000552888 scopus 로고
    • Biological Properties and Classification of the Caulobacter Group
    • Poindexter JS, (1964) Biological Properties and Classification of the Caulobacter Group. Bacteriol Rev 28: 231-295.
    • (1964) Bacteriol Rev , vol.28 , pp. 231-295
    • Poindexter, J.S.1
  • 2
    • 52949102235 scopus 로고    scopus 로고
    • Complex regulatory pathways coordinate cell-cycle progression and development in Caulobacter crescentus
    • Brown PJ, Hardy GG, Trimble MJ, Brun YV, (2009) Complex regulatory pathways coordinate cell-cycle progression and development in Caulobacter crescentus. Adv Microb Physiol 54: 1-101.
    • (2009) Adv Microb Physiol , vol.54 , pp. 1-101
    • Brown, P.J.1    Hardy, G.G.2    Trimble, M.J.3    Brun, Y.V.4
  • 3
    • 36248939597 scopus 로고    scopus 로고
    • Cell cycle regulation in Caulobacter: location, location, location
    • Goley ED, Iniesta AA, Shapiro L, (2007) Cell cycle regulation in Caulobacter: location, location, location. J Cell Sci 120: 3501-3507.
    • (2007) J Cell Sci , vol.120 , pp. 3501-3507
    • Goley, E.D.1    Iniesta, A.A.2    Shapiro, L.3
  • 4
    • 33645836307 scopus 로고    scopus 로고
    • Cell cycle control by oscillating regulatory proteins in Caulobacter crescentus
    • Holtzendorff J, Reinhardt J, Viollier PH, (2006) Cell cycle control by oscillating regulatory proteins in Caulobacter crescentus. Bioessays 28: 355-361.
    • (2006) Bioessays , vol.28 , pp. 355-361
    • Holtzendorff, J.1    Reinhardt, J.2    Viollier, P.H.3
  • 5
    • 0346334442 scopus 로고    scopus 로고
    • Regulatory proteins with a sense of direction: cell cycle signalling network in Caulobacter
    • Jacobs-Wagner C, (2004) Regulatory proteins with a sense of direction: cell cycle signalling network in Caulobacter. Mol Microbiol 51: 7-13.
    • (2004) Mol Microbiol , vol.51 , pp. 7-13
    • Jacobs-Wagner, C.1
  • 6
    • 0026020230 scopus 로고
    • Identification of a central regulator of stationary-phase gene expression in Escherichia coli
    • Lange R, Hengge-Aronis R, (1991) Identification of a central regulator of stationary-phase gene expression in Escherichia coli. Mol Microbiol 5: 49-59.
    • (1991) Mol Microbiol , vol.5 , pp. 49-59
    • Lange, R.1    Hengge-Aronis, R.2
  • 7
    • 0032586856 scopus 로고    scopus 로고
    • Expression of the sigmaB-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis
    • Volker U, Maul B, Hecker M, (1999) Expression of the sigmaB-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis. J Bacteriol 181: 3942-3948.
    • (1999) J Bacteriol , vol.181 , pp. 3942-3948
    • Volker, U.1    Maul, B.2    Hecker, M.3
  • 8
    • 77954421693 scopus 로고    scopus 로고
    • Evolution of the RpoS regulon: origin of RpoS and the conservation of RpoS-dependent regulation in bacteria
    • Chiang SM, Schellhorn HE, (2010) Evolution of the RpoS regulon: origin of RpoS and the conservation of RpoS-dependent regulation in bacteria. J Mol Evol 70: 557-571.
    • (2010) J Mol Evol , vol.70 , pp. 557-571
    • Chiang, S.M.1    Schellhorn, H.E.2
  • 9
    • 35848954992 scopus 로고    scopus 로고
    • SigB-dependent general stress response in Bacillus subtilis and related gram-positive bacteria
    • Hecker M, Pane-Farre J, Volker U, (2007) SigB-dependent general stress response in Bacillus subtilis and related gram-positive bacteria. Annu Rev Microbiol 61: 215-236.
    • (2007) Annu Rev Microbiol , vol.61 , pp. 215-236
    • Hecker, M.1    Pane-Farre, J.2    Volker, U.3
  • 10
    • 53849100653 scopus 로고    scopus 로고
    • SpoT regulates DnaA stability and initiation of DNA replication in carbon-starved Caulobacter crescentus
    • Lesley JA, Shapiro L, (2008) SpoT regulates DnaA stability and initiation of DNA replication in carbon-starved Caulobacter crescentus. J Bacteriol 190: 6867-6880.
    • (2008) J Bacteriol , vol.190 , pp. 6867-6880
    • Lesley, J.A.1    Shapiro, L.2
  • 11
    • 77956542074 scopus 로고    scopus 로고
    • CrfA, a small noncoding RNA regulator of adaptation to carbon starvation in Caulobacter crescentus
    • Landt SG, Lesley JA, Britos L, Shapiro L, (2010) CrfA, a small noncoding RNA regulator of adaptation to carbon starvation in Caulobacter crescentus. J Bacteriol 192: 4763-4775.
    • (2010) J Bacteriol , vol.192 , pp. 4763-4775
    • Landt, S.G.1    Lesley, J.A.2    Britos, L.3    Shapiro, L.4
  • 12
    • 75149126237 scopus 로고    scopus 로고
    • Global regulation of gene expression and cell differentiation in Caulobacter crescentus in response to nutrient availability
    • England JC, Perchuk BS, Laub MT, Gober JW, (2010) Global regulation of gene expression and cell differentiation in Caulobacter crescentus in response to nutrient availability. J Bacteriol 192: 819-833.
    • (2010) J Bacteriol , vol.192 , pp. 819-833
    • England, J.C.1    Perchuk, B.S.2    Laub, M.T.3    Gober, J.W.4
  • 13
    • 71149092673 scopus 로고    scopus 로고
    • System-level design of bacterial cell cycle control
    • McAdams HH, Shapiro L, (2009) System-level design of bacterial cell cycle control. FEBS Lett 583: 3984-3991.
    • (2009) FEBS Lett , vol.583 , pp. 3984-3991
    • McAdams, H.H.1    Shapiro, L.2
  • 15
    • 0036037333 scopus 로고    scopus 로고
    • Proteomic analysis of the Caulobacter crescentus stalk indicates competence for nutrient uptake
    • Ireland MM, Karty JA, Quardokus EM, Reilly JP, Brun YV, (2002) Proteomic analysis of the Caulobacter crescentus stalk indicates competence for nutrient uptake. Mol Microbiol 45: 1029-1041.
    • (2002) Mol Microbiol , vol.45 , pp. 1029-1041
    • Ireland, M.M.1    Karty, J.A.2    Quardokus, E.M.3    Reilly, J.P.4    Brun, Y.V.5
  • 16
    • 0035997276 scopus 로고    scopus 로고
    • Profiling the alkaline membrane proteome of Caulobacter crescentus with two-dimensional electrophoresis and mass spectrometry
    • Molloy MP, Phadke ND, Chen H, Tyldesley R, Garfin DE, et al. (2002) Profiling the alkaline membrane proteome of Caulobacter crescentus with two-dimensional electrophoresis and mass spectrometry. Proteomics 2: 899-910.
    • (2002) Proteomics , vol.2 , pp. 899-910
    • Molloy, M.P.1    Phadke, N.D.2    Chen, H.3    Tyldesley, R.4    Garfin, D.E.5
  • 17
    • 0035346708 scopus 로고    scopus 로고
    • Analysis of the outer membrane proteome of Caulobacter crescentus by two-dimensional electrophoresis and mass spectrometry
    • Phadke ND, Molloy MP, Steinhoff SA, Ulintz PJ, Andrews PC, et al. (2001) Analysis of the outer membrane proteome of Caulobacter crescentus by two-dimensional electrophoresis and mass spectrometry. Proteomics 1: 705-720.
    • (2001) Proteomics , vol.1 , pp. 705-720
    • Phadke, N.D.1    Molloy, M.P.2    Steinhoff, S.A.3    Ulintz, P.J.4    Andrews, P.C.5
  • 18
  • 19
    • 77950275435 scopus 로고    scopus 로고
    • Caulobacter PopZ forms a polar subdomain dictating sequential changes in pole composition and function
    • Bowman GR, Comolli LR, Gaietta GM, Fero M, Hong SH, et al. (2010) Caulobacter PopZ forms a polar subdomain dictating sequential changes in pole composition and function. Mol Microbiol 76: 173-189.
    • (2010) Mol Microbiol , vol.76 , pp. 173-189
    • Bowman, G.R.1    Comolli, L.R.2    Gaietta, G.M.3    Fero, M.4    Hong, S.H.5
  • 20
    • 0037341855 scopus 로고    scopus 로고
    • Productive interaction between the chromosome partitioning proteins, ParA and ParB, is required for the progression of the cell cycle in Caulobacter crescentus
    • Figge RM, Easter J, Gober JW, (2003) Productive interaction between the chromosome partitioning proteins, ParA and ParB, is required for the progression of the cell cycle in Caulobacter crescentus. Mol Microbiol 47: 1225-1237.
    • (2003) Mol Microbiol , vol.47 , pp. 1225-1237
    • Figge, R.M.1    Easter, J.2    Gober, J.W.3
  • 21
    • 28244473355 scopus 로고    scopus 로고
    • DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus
    • Hottes AK, Shapiro L, McAdams HH, (2005) DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus. Mol Microbiol 58: 1340-1353.
    • (2005) Mol Microbiol , vol.58 , pp. 1340-1353
    • Hottes, A.K.1    Shapiro, L.2    McAdams, H.H.3
  • 22
    • 14544304071 scopus 로고    scopus 로고
    • Regulated degradation of chromosome replication proteins DnaA and CtrA in Caulobacter crescentus
    • Gorbatyuk B, Marczynski GT, (2005) Regulated degradation of chromosome replication proteins DnaA and CtrA in Caulobacter crescentus. Mol Microbiol 55: 1233-1245.
    • (2005) Mol Microbiol , vol.55 , pp. 1233-1245
    • Gorbatyuk, B.1    Marczynski, G.T.2
  • 23
    • 0031841746 scopus 로고    scopus 로고
    • Morphological adaptation and inhibition of cell division during stationary phase in Caulobacter crescentus
    • Wortinger MA, Quardokus EM, Brun YV, (1998) Morphological adaptation and inhibition of cell division during stationary phase in Caulobacter crescentus. Mol Microbiol 29: 963-973.
    • (1998) Mol Microbiol , vol.29 , pp. 963-973
    • Wortinger, M.A.1    Quardokus, E.M.2    Brun, Y.V.3
  • 24
    • 0034671792 scopus 로고    scopus 로고
    • Global analysis of the genetic network controlling a bacterial cell cycle
    • Laub MT, McAdams HH, Feldblyum T, Fraser CM, Shapiro L, (2000) Global analysis of the genetic network controlling a bacterial cell cycle. Science 290: 2144-2148.
    • (2000) Science , vol.290 , pp. 2144-2148
    • Laub, M.T.1    McAdams, H.H.2    Feldblyum, T.3    Fraser, C.M.4    Shapiro, L.5
  • 25
    • 34249708917 scopus 로고    scopus 로고
    • High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons
    • McGrath PT, Lee H, Zhang L, Iniesta AA, Hottes AK, et al. (2007) High-throughput identification of transcription start sites, conserved promoter motifs and predicted regulons. Nat Biotechnol 25: 584-592.
    • (2007) Nat Biotechnol , vol.25 , pp. 584-592
    • McGrath, P.T.1    Lee, H.2    Zhang, L.3    Iniesta, A.A.4    Hottes, A.K.5
  • 26
    • 0029126328 scopus 로고
    • A consensus promoter sequence for Caulobacter crescentus genes involved in biosynthetic and housekeeping functions
    • Malakooti J, Wang SP, Ely B, (1995) A consensus promoter sequence for Caulobacter crescentus genes involved in biosynthetic and housekeeping functions. J Bacteriol 177: 4372-4376.
    • (1995) J Bacteriol , vol.177 , pp. 4372-4376
    • Malakooti, J.1    Wang, S.P.2    Ely, B.3
  • 27
    • 20344374161 scopus 로고    scopus 로고
    • Conserved modular design of an oxygen sensory/signaling network with species-specific output
    • Crosson S, McGrath PT, Stephens C, McAdams HH, Shapiro L, (2005) Conserved modular design of an oxygen sensory/signaling network with species-specific output. Proc Natl Acad Sci U S A 102: 8018-8023.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 8018-8023
    • Crosson, S.1    McGrath, P.T.2    Stephens, C.3    McAdams, H.H.4    Shapiro, L.5
  • 28
    • 36148983428 scopus 로고    scopus 로고
    • The ECF sigma factor sigma(T) is involved in osmotic and oxidative stress responses in Caulobacter crescentus
    • Alvarez-Martinez CE, Lourenco RF, Baldini RL, Laub MT, Gomes SL, (2007) The ECF sigma factor sigma(T) is involved in osmotic and oxidative stress responses in Caulobacter crescentus. Mol Microbiol 66: 1240-1255.
    • (2007) Mol Microbiol , vol.66 , pp. 1240-1255
    • Alvarez-Martinez, C.E.1    Lourenco, R.F.2    Baldini, R.L.3    Laub, M.T.4    Gomes, S.L.5
  • 29
    • 28844480427 scopus 로고    scopus 로고
    • Whole-genome transcriptional analysis of heavy metal stresses in Caulobacter crescentus
    • Hu P, Brodie EL, Suzuki Y, McAdams HH, Andersen GL, (2005) Whole-genome transcriptional analysis of heavy metal stresses in Caulobacter crescentus. J Bacteriol 187: 8437-8449.
    • (2005) J Bacteriol , vol.187 , pp. 8437-8449
    • Hu, P.1    Brodie, E.L.2    Suzuki, Y.3    McAdams, H.H.4    Andersen, G.L.5
  • 30
    • 1342325451 scopus 로고    scopus 로고
    • Transcriptional profiling of Caulobacter crescentus during growth on complex and minimal media
    • Hottes AK, Meewan M, Yang D, Arana N, Romero P, et al. (2004) Transcriptional profiling of Caulobacter crescentus during growth on complex and minimal media. J Bacteriol 186: 1448-1461.
    • (2004) J Bacteriol , vol.186 , pp. 1448-1461
    • Hottes, A.K.1    Meewan, M.2    Yang, D.3    Arana, N.4    Romero, P.5
  • 31
    • 0037007079 scopus 로고    scopus 로고
    • Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle
    • Laub MT, Chen SL, Shapiro L, McAdams HH, (2002) Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle. Proc Natl Acad Sci U S A 99: 4632-4637.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 4632-4637
    • Laub, M.T.1    Chen, S.L.2    Shapiro, L.3    McAdams, H.H.4
  • 32
    • 0027416514 scopus 로고
    • Molecular analysis of the phoH gene, belonging to the phosphate regulon in Escherichia coli
    • Kim SK, Makino K, Amemura M, Shinagawa H, Nakata A, (1993) Molecular analysis of the phoH gene, belonging to the phosphate regulon in Escherichia coli. J Bacteriol 175: 1316-1324.
    • (1993) J Bacteriol , vol.175 , pp. 1316-1324
    • Kim, S.K.1    Makino, K.2    Amemura, M.3    Shinagawa, H.4    Nakata, A.5
  • 33
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • Bailey TL, Elkan C, (1994) Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 2: 28-36.
    • (1994) Proc Int Conf Intell Syst Mol Biol , vol.2 , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2
  • 34
    • 0031940593 scopus 로고    scopus 로고
    • Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin
    • Quon KC, Yang B, Domian IJ, Shapiro L, Marczynski GT, (1998) Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin. Proc Natl Acad Sci U S A 95: 120-125.
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 120-125
    • Quon, K.C.1    Yang, B.2    Domian, I.J.3    Shapiro, L.4    Marczynski, G.T.5
  • 36
    • 77950651423 scopus 로고    scopus 로고
    • Dual control of Sinorhizobium meliloti RpoE2 sigma factor activity by two PhyR-type two-component response regulators
    • Bastiat B, Sauviac L, Bruand C, (2010) Dual control of Sinorhizobium meliloti RpoE2 sigma factor activity by two PhyR-type two-component response regulators. J Bacteriol 192: 2255-2265.
    • (2010) J Bacteriol , vol.192 , pp. 2255-2265
    • Bastiat, B.1    Sauviac, L.2    Bruand, C.3
  • 37
    • 78649344439 scopus 로고    scopus 로고
    • A structural model of anti-anti-sigma inhibition by a two-component receiver domain: the PhyR stress response regulator
    • Herrou J, Foreman R, Fiebig A, Crosson S, (2010) A structural model of anti-anti-sigma inhibition by a two-component receiver domain: the PhyR stress response regulator. Mol Microbiol 78: 290-304.
    • (2010) Mol Microbiol , vol.78 , pp. 290-304
    • Herrou, J.1    Foreman, R.2    Fiebig, A.3    Crosson, S.4
  • 38
    • 0036791012 scopus 로고    scopus 로고
    • A signal transduction protein cues proteolytic events critical to Caulobacter cell cycle progression
    • Hung DY, Shapiro L, (2002) A signal transduction protein cues proteolytic events critical to Caulobacter cell cycle progression. Proc Natl Acad Sci U S A 99: 13160-13165.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 13160-13165
    • Hung, D.Y.1    Shapiro, L.2
  • 39
    • 0032896914 scopus 로고    scopus 로고
    • Cell cycle-dependent degradation of a flagellar motor component requires a novel-type response regulator
    • Aldridge P, Jenal U, (1999) Cell cycle-dependent degradation of a flagellar motor component requires a novel-type response regulator. Mol Microbiol 32: 379-391.
    • (1999) Mol Microbiol , vol.32 , pp. 379-391
    • Aldridge, P.1    Jenal, U.2
  • 40
    • 77749327485 scopus 로고    scopus 로고
    • Getting in the loop: regulation of development in Caulobacter crescentus
    • Curtis PD, Brun YV, (2010) Getting in the loop: regulation of development in Caulobacter crescentus. Microbiol Mol Biol Rev 74: 13-41.
    • (2010) Microbiol Mol Biol Rev , vol.74 , pp. 13-41
    • Curtis, P.D.1    Brun, Y.V.2
  • 41
    • 0030011228 scopus 로고    scopus 로고
    • Cell cycle regulation and cell type-specific localization of the FtsZ division initiation protein in Caulobacter
    • Quardokus E, Din N, Brun YV, (1996) Cell cycle regulation and cell type-specific localization of the FtsZ division initiation protein in Caulobacter. Proc Natl Acad Sci U S A 93: 6314-6319.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 6314-6319
    • Quardokus, E.1    Din, N.2    Brun, Y.V.3
  • 42
    • 1642540997 scopus 로고    scopus 로고
    • A predicted ABC transporter, FtsEX, is needed for cell division in Escherichia coli
    • Schmidt KL, Peterson ND, Kustusch RJ, Wissel MC, Graham B, et al. (2004) A predicted ABC transporter, FtsEX, is needed for cell division in Escherichia coli. J Bacteriol 186: 785-793.
    • (2004) J Bacteriol , vol.186 , pp. 785-793
    • Schmidt, K.L.1    Peterson, N.D.2    Kustusch, R.J.3    Wissel, M.C.4    Graham, B.5
  • 43
    • 0344824655 scopus 로고    scopus 로고
    • Proteolysis in bacterial regulatory circuits
    • Gottesman S, (2003) Proteolysis in bacterial regulatory circuits. Annu Rev Cell Dev Biol 19: 565-587.
    • (2003) Annu Rev Cell Dev Biol , vol.19 , pp. 565-587
    • Gottesman, S.1
  • 44
    • 0036225047 scopus 로고    scopus 로고
    • The FtsH protease is involved in development, stress response and heat shock control in Caulobacter crescentus
    • Fischer B, Rummel G, Aldridge P, Jenal U, (2002) The FtsH protease is involved in development, stress response and heat shock control in Caulobacter crescentus. Mol Microbiol 44: 461-478.
    • (2002) Mol Microbiol , vol.44 , pp. 461-478
    • Fischer, B.1    Rummel, G.2    Aldridge, P.3    Jenal, U.4
  • 45
    • 0032875384 scopus 로고    scopus 로고
    • The Caulobacter crescentus smc gene is required for cell cycle progression and chromosome segregation
    • Jensen RB, Shapiro L, (1999) The Caulobacter crescentus smc gene is required for cell cycle progression and chromosome segregation. Proc Natl Acad Sci U S A 96: 10661-10666.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 10661-10666
    • Jensen, R.B.1    Shapiro, L.2
  • 46
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
    • Ali Azam T, Iwata A, Nishimura A, Ueda S, Ishihama A, (1999) Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J Bacteriol 181: 6361-6370.
    • (1999) J Bacteriol , vol.181 , pp. 6361-6370
    • Ali Azam, T.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 47
    • 0031576352 scopus 로고    scopus 로고
    • Variation in HU composition during growth of Escherichia coli: the heterodimer is required for long term survival
    • Claret L, Rouviere-Yaniv J, (1997) Variation in HU composition during growth of Escherichia coli: the heterodimer is required for long term survival. J Mol Biol 273: 93-104.
    • (1997) J Mol Biol , vol.273 , pp. 93-104
    • Claret, L.1    Rouviere-Yaniv, J.2
  • 48
    • 0025332515 scopus 로고
    • Starvation-induced cross protection against osmotic challenge in Escherichia coli
    • Jenkins DE, Chaisson SA, Matin A, (1990) Starvation-induced cross protection against osmotic challenge in Escherichia coli. J Bacteriol 172: 2779-2781.
    • (1990) J Bacteriol , vol.172 , pp. 2779-2781
    • Jenkins, D.E.1    Chaisson, S.A.2    Matin, A.3
  • 49
    • 0026035207 scopus 로고
    • Role of RpoH, a heat shock regulator protein, in Escherichia coli carbon starvation protein synthesis and survival
    • Jenkins DE, Auger EA, Matin A, (1991) Role of RpoH, a heat shock regulator protein, in Escherichia coli carbon starvation protein synthesis and survival. J Bacteriol 173: 1992-1996.
    • (1991) J Bacteriol , vol.173 , pp. 1992-1996
    • Jenkins, D.E.1    Auger, E.A.2    Matin, A.3
  • 50
    • 77955102352 scopus 로고    scopus 로고
    • Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells
    • Taniguchi Y, Choi PJ, Li GW, Chen H, Babu M, et al. (2010) Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells. Science 329: 533-538.
    • (2010) Science , vol.329 , pp. 533-538
    • Taniguchi, Y.1    Choi, P.J.2    Li, G.W.3    Chen, H.4    Babu, M.5
  • 51
    • 0345871250 scopus 로고    scopus 로고
    • Insights into the relation between mrna and protein expression patterns: II. Experimental observations in Escherichia coli
    • Lee PS, Shaw LB, Choe LH, Mehra A, Hatzimanikatis V, et al. (2003) Insights into the relation between mrna and protein expression patterns: II. Experimental observations in Escherichia coli. Biotechnol Bioeng 84: 834-841.
    • (2003) Biotechnol Bioeng , vol.84 , pp. 834-841
    • Lee, P.S.1    Shaw, L.B.2    Choe, L.H.3    Mehra, A.4    Hatzimanikatis, V.5
  • 54
    • 0025361131 scopus 로고
    • Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication
    • Sassanfar M, Roberts JW, (1990) Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication. J Mol Biol 212: 79-96.
    • (1990) J Mol Biol , vol.212 , pp. 79-96
    • Sassanfar, M.1    Roberts, J.W.2
  • 55
    • 0027513320 scopus 로고
    • Cell division inhibitors SulA and MinCD prevent formation of the FtsZ ring
    • Bi E, Lutkenhaus J, (1993) Cell division inhibitors SulA and MinCD prevent formation of the FtsZ ring. J Bacteriol 175: 1118-1125.
    • (1993) J Bacteriol , vol.175 , pp. 1118-1125
    • Bi, E.1    Lutkenhaus, J.2
  • 56
    • 0036198628 scopus 로고    scopus 로고
    • Recent insights into the general stress response regulatory network in Escherichia coli
    • Hengge-Aronis R, (2002) Recent insights into the general stress response regulatory network in Escherichia coli. J Mol Microbiol Biotechnol 4: 341-346.
    • (2002) J Mol Microbiol Biotechnol , vol.4 , pp. 341-346
    • Hengge-Aronis, R.1
  • 57
    • 0034987011 scopus 로고    scopus 로고
    • General stress response of Bacillus subtilis and other bacteria
    • Hecker M, Volker U, (2001) General stress response of Bacillus subtilis and other bacteria. Adv Microb Physiol 44: 35-91.
    • (2001) Adv Microb Physiol , vol.44 , pp. 35-91
    • Hecker, M.1    Volker, U.2
  • 58
    • 0035988313 scopus 로고    scopus 로고
    • A phylogenomic study of the general stress response sigma factor sigmaB of Bacillus subtilis and its regulatory proteins
    • Mittenhuber G, (2002) A phylogenomic study of the general stress response sigma factor sigmaB of Bacillus subtilis and its regulatory proteins. J Mol Microbiol Biotechnol 4: 427-452.
    • (2002) J Mol Microbiol Biotechnol , vol.4 , pp. 427-452
    • Mittenhuber, G.1
  • 59
    • 33644784103 scopus 로고    scopus 로고
    • A caulobacter crescentus extracytoplasmic function sigma factor mediating the response to oxidative stress in stationary phase
    • Alvarez-Martinez CE, Baldini RL, Gomes SL, (2006) A caulobacter crescentus extracytoplasmic function sigma factor mediating the response to oxidative stress in stationary phase. J Bacteriol 188: 1835-1846.
    • (2006) J Bacteriol , vol.188 , pp. 1835-1846
    • Alvarez-Martinez, C.E.1    Baldini, R.L.2    Gomes, S.L.3
  • 60
    • 65949116812 scopus 로고    scopus 로고
    • The transcriptional response to cadmium, organic hydroperoxide, singlet oxygen and UV-A mediated by the sigmaE-ChrR system in Caulobacter crescentus
    • Lourenco RF, Gomes SL, (2009) The transcriptional response to cadmium, organic hydroperoxide, singlet oxygen and UV-A mediated by the sigmaE-ChrR system in Caulobacter crescentus. Mol Microbiol 72: 1159-1170.
    • (2009) Mol Microbiol , vol.72 , pp. 1159-1170
    • Lourenco, R.F.1    Gomes, S.L.2
  • 61
    • 34249796382 scopus 로고    scopus 로고
    • An extracytoplasmic function sigma factor acts as a general stress response regulator in Sinorhizobium meliloti
    • Sauviac L, Philippe H, Phok K, Bruand C, (2007) An extracytoplasmic function sigma factor acts as a general stress response regulator in Sinorhizobium meliloti. J Bacteriol 189: 4204-4216.
    • (2007) J Bacteriol , vol.189 , pp. 4204-4216
    • Sauviac, L.1    Philippe, H.2    Phok, K.3    Bruand, C.4
  • 62
    • 70350432754 scopus 로고    scopus 로고
    • The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family
    • Staron A, Sofia HJ, Dietrich S, Ulrich LE, Liesegang H, et al. (2009) The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family. Mol Microbiol 74: 557-581.
    • (2009) Mol Microbiol , vol.74 , pp. 557-581
    • Staron, A.1    Sofia, H.J.2    Dietrich, S.3    Ulrich, L.E.4    Liesegang, H.5
  • 63
    • 0017740506 scopus 로고
    • Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells
    • Evinger M, Agabian N, (1977) Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells. J Bacteriol 132: 294-301.
    • (1977) J Bacteriol , vol.132 , pp. 294-301
    • Evinger, M.1    Agabian, N.2
  • 64
    • 0030035042 scopus 로고    scopus 로고
    • A cell cycle-regulated bacterial DNA methyltransferase is essential for viability
    • Stephens C, Reisenauer A, Wright R, Shapiro L, (1996) A cell cycle-regulated bacterial DNA methyltransferase is essential for viability. Proc Natl Acad Sci U S A 93: 1210-1214.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 1210-1214
    • Stephens, C.1    Reisenauer, A.2    Wright, R.3    Shapiro, L.4
  • 65
    • 0034884131 scopus 로고    scopus 로고
    • Proteolysis of the Caulobacter McpA chemoreceptor is cell cycle regulated by a ClpX-dependent pathway
    • Tsai JW, Alley MR, (2001) Proteolysis of the Caulobacter McpA chemoreceptor is cell cycle regulated by a ClpX-dependent pathway. J Bacteriol 183: 5001-5007.
    • (2001) J Bacteriol , vol.183 , pp. 5001-5007
    • Tsai, J.W.1    Alley, M.R.2
  • 66
    • 33749424678 scopus 로고    scopus 로고
    • Proteomic analysis of Salmonella enterica serovar typhimurium isolated from RAW 264.7 macrophages: identification of a novel protein that contributes to the replication of serovar typhimurium inside macrophages
    • Shi L, Adkins JN, Coleman JR, Schepmoes AA, Dohnkova A, et al. (2006) Proteomic analysis of Salmonella enterica serovar typhimurium isolated from RAW 264.7 macrophages: identification of a novel protein that contributes to the replication of serovar typhimurium inside macrophages. J Biol Chem 281: 29131-29140.
    • (2006) J Biol Chem , vol.281 , pp. 29131-29140
    • Shi, L.1    Adkins, J.N.2    Coleman, J.R.3    Schepmoes, A.A.4    Dohnkova, A.5
  • 68
    • 34548136221 scopus 로고    scopus 로고
    • VIPER: an advanced software package to support high-throughput LC-MS peptide identification
    • Monroe ME, Tolic N, Jaitly N, Shaw JL, Adkins JN, et al. (2007) VIPER: an advanced software package to support high-throughput LC-MS peptide identification. Bioinformatics 23: 2021-2023.
    • (2007) Bioinformatics , vol.23 , pp. 2021-2023
    • Monroe, M.E.1    Tolic, N.2    Jaitly, N.3    Shaw, J.L.4    Adkins, J.N.5
  • 69
    • 51649090147 scopus 로고    scopus 로고
    • A computational strategy to analyze label-free temporal bottom-up proteomics data
    • Du X, Callister SJ, Manes NP, Adkins JN, Alexandridis RA, et al. (2008) A computational strategy to analyze label-free temporal bottom-up proteomics data. J Proteome Res 7: 2595-2604.
    • (2008) J Proteome Res , vol.7 , pp. 2595-2604
    • Du, X.1    Callister, S.J.2    Manes, N.P.3    Adkins, J.N.4    Alexandridis, R.A.5
  • 71
    • 33745699284 scopus 로고    scopus 로고
    • MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter
    • Thanbichler M, Shapiro L, (2006) MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. Cell 126: 147-162.
    • (2006) Cell , vol.126 , pp. 147-162
    • Thanbichler, M.1    Shapiro, L.2
  • 73
    • 0033536009 scopus 로고    scopus 로고
    • Feedback control of a master bacterial cell-cycle regulator
    • Domian IJ, Reisenauer A, Shapiro L, (1999) Feedback control of a master bacterial cell-cycle regulator. Proc Natl Acad Sci U S A 96: 6648-6653.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 6648-6653
    • Domian, I.J.1    Reisenauer, A.2    Shapiro, L.3
  • 74
    • 0003785155 scopus 로고
    • Cold Spring Harbor, N.Y., Cold Spring Harbor Laboratory
    • Miller JH, (1972) Experiments in molecular genetics Cold Spring Harbor, N.Y. Cold Spring Harbor Laboratory pp. xvi, 466.
    • (1972) Experiments in Molecular Genetics
    • Miller, J.H.1
  • 75
    • 77954419450 scopus 로고    scopus 로고
    • The genetic basis of laboratory adaptation in Caulobacter crescentus
    • Marks ME, Castro-Rojas CM, Teiling C, Du L, Kapatral V, et al. (2010) The genetic basis of laboratory adaptation in Caulobacter crescentus. J Bacteriol 192: 3678-3688.
    • (2010) J Bacteriol , vol.192 , pp. 3678-3688
    • Marks, M.E.1    Castro-Rojas, C.M.2    Teiling, C.3    Du, L.4    Kapatral, V.5
  • 76
    • 75849133666 scopus 로고    scopus 로고
    • Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
    • Karp PD, Paley SM, Krummenacker M, Latendresse M, Dale JM, et al. (2010) Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology. Brief Bioinform 11: 40-79.
    • (2010) Brief Bioinform , vol.11 , pp. 40-79
    • Karp, P.D.1    Paley, S.M.2    Krummenacker, M.3    Latendresse, M.4    Dale, J.M.5
  • 77
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, normalization, and summaries of high density oligonucleotide array probe level data
    • Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, et al. (2003) Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-264.
    • (2003) Biostatistics , vol.4 , pp. 249-264
    • Irizarry, R.A.1    Hobbs, B.2    Collin, F.3    Beazer-Barclay, Y.D.4    Antonellis, K.J.5
  • 78
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R, Chu G, (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci U S A 98: 5116-5121.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 79
    • 33747823564 scopus 로고    scopus 로고
    • MEME: discovering and analyzing DNA and protein sequence motifs
    • Bailey TL, Williams N, Misleh C, Li WW, (2006) MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res 34: W369-373.
    • (2006) Nucleic Acids Res , vol.34
    • Bailey, T.L.1    Williams, N.2    Misleh, C.3    Li, W.W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.