-
1
-
-
0032866483
-
HIV-1 subtype C syncytium- and non-syncytium-inducing phenotypes and coreceptor usage among Ethiopian patients with AIDS
-
Abebe A., Demissie D., Goudsmit J., Brouwer M., Kuiken C.L., Pollakis G., Schuitemaker H., Fontanet A.L., Rinke de Wit T.F. HIV-1 subtype C syncytium- and non-syncytium-inducing phenotypes and coreceptor usage among Ethiopian patients with AIDS. AIDS 1999, 13(11):1305-1311.
-
(1999)
AIDS
, vol.13
, Issue.11
, pp. 1305-1311
-
-
Abebe, A.1
Demissie, D.2
Goudsmit, J.3
Brouwer, M.4
Kuiken, C.L.5
Pollakis, G.6
Schuitemaker, H.7
Fontanet, A.L.8
Rinke de Wit, T.F.9
-
2
-
-
0034235153
-
HIV type 1 envelope subtype C sequences from recent seroconverters in Zimbabwe
-
Batra M., Tien P.C., Shafer R.W., Contag C.H., Katzenstein D.A. HIV type 1 envelope subtype C sequences from recent seroconverters in Zimbabwe. AIDS Res. Hum. Retroviruses 2000, 16(10):973-979.
-
(2000)
AIDS Res. Hum. Retroviruses
, vol.16
, Issue.10
, pp. 973-979
-
-
Batra, M.1
Tien, P.C.2
Shafer, R.W.3
Contag, C.H.4
Katzenstein, D.A.5
-
3
-
-
2442765375
-
Phenotypic characteristics of human immunodeficiency virus type 1 subtype C isolates of Ethiopian AIDS patients
-
Bjorndal A., Sonnerborg A., Tscherning C., Albert J., Fenyo E.M. Phenotypic characteristics of human immunodeficiency virus type 1 subtype C isolates of Ethiopian AIDS patients. AIDS Res. Hum. Retroviruses 1999, 15(7):647-653.
-
(1999)
AIDS Res. Hum. Retroviruses
, vol.15
, Issue.7
, pp. 647-653
-
-
Bjorndal, A.1
Sonnerborg, A.2
Tscherning, C.3
Albert, J.4
Fenyo, E.M.5
-
4
-
-
0028146788
-
Cryptic nature of envelope V3 region epitopes protects primary monocytotropic human immunodeficiency virus type 1 from antibody neutralization
-
Bou-Habib D.C., Roderiquez G., Oravecz T., Berman P.W., Lusso P., Norcross M.A. Cryptic nature of envelope V3 region epitopes protects primary monocytotropic human immunodeficiency virus type 1 from antibody neutralization. J. Virol. 1994, 68(9):6006-6013.
-
(1994)
J. Virol.
, vol.68
, Issue.9
, pp. 6006-6013
-
-
Bou-Habib, D.C.1
Roderiquez, G.2
Oravecz, T.3
Berman, P.W.4
Lusso, P.5
Norcross, M.A.6
-
5
-
-
34247214426
-
Structural basis for coreceptor selectivity by the HIV type 1 V3 loop
-
Cardozo T., Kimura T., Philpott S., Weiser B., Burger H., Zolla-Pazner S. Structural basis for coreceptor selectivity by the HIV type 1 V3 loop. AIDS Res. Hum. Retroviruses 2007, 23(3):415-426.
-
(2007)
AIDS Res. Hum. Retroviruses
, vol.23
, Issue.3
, pp. 415-426
-
-
Cardozo, T.1
Kimura, T.2
Philpott, S.3
Weiser, B.4
Burger, H.5
Zolla-Pazner, S.6
-
6
-
-
0034608197
-
Absence of coreceptor switch with disease progression in human immunodeficiency virus infections in India
-
Cecilia D., Kulkarni S.S., Tripathy S.P., Gangakhedkar R.R., Paranjape R.S., Gadkari D.A. Absence of coreceptor switch with disease progression in human immunodeficiency virus infections in India. Virology 2000, 271(2):253-258.
-
(2000)
Virology
, vol.271
, Issue.2
, pp. 253-258
-
-
Cecilia, D.1
Kulkarni, S.S.2
Tripathy, S.P.3
Gangakhedkar, R.R.4
Paranjape, R.S.5
Gadkari, D.A.6
-
7
-
-
0005014748
-
The beta-chemokine receptors CCR3 and CCR5 facilitate infection by primary HIV-1 isolates
-
Choe H., Farzan M., Sun Y., Sullivan N., Rollins B., Ponath P.D., Wu L., Mackay C.R., LaRosa G., Newman W., Gerard N., Gerard C., Sodroski J. The beta-chemokine receptors CCR3 and CCR5 facilitate infection by primary HIV-1 isolates. Cell 1996, 85(7):1135-1148.
-
(1996)
Cell
, vol.85
, Issue.7
, pp. 1135-1148
-
-
Choe, H.1
Farzan, M.2
Sun, Y.3
Sullivan, N.4
Rollins, B.5
Ponath, P.D.6
Wu, L.7
Mackay, C.R.8
LaRosa, G.9
Newman, W.10
Gerard, N.11
Gerard, C.12
Sodroski, J.13
-
8
-
-
0042855800
-
Tyrosine sulfation of human antibodies contributes to recognition of the CCR5 binding region of HIV-1 gp120
-
Choe H., Li W., Wright P.L., Vasilieva N., Venturi M., Huang C.C., Grundner C., Dorfman T., Zwick M.B., Wang L., Rosenberg E.S., Kwong P.D., Burton D.R., Robinson J.E., Sodroski J.G., Farzan M. Tyrosine sulfation of human antibodies contributes to recognition of the CCR5 binding region of HIV-1 gp120. Cell 2003, 114(2):161-170.
-
(2003)
Cell
, vol.114
, Issue.2
, pp. 161-170
-
-
Choe, H.1
Li, W.2
Wright, P.L.3
Vasilieva, N.4
Venturi, M.5
Huang, C.C.6
Grundner, C.7
Dorfman, T.8
Zwick, M.B.9
Wang, L.10
Rosenberg, E.S.11
Kwong, P.D.12
Burton, D.R.13
Robinson, J.E.14
Sodroski, J.G.15
Farzan, M.16
-
9
-
-
18144397438
-
Selection for human immunodeficiency virus type 1 envelope glycosylation variants with shorter V1-V2 loop sequences occurs during transmission of certain genetic subtypes and may impact viral RNA levels
-
Chohan B., Lang D., Sagar M., Korber B., Lavreys L., Richardson B., Overbaugh J. Selection for human immunodeficiency virus type 1 envelope glycosylation variants with shorter V1-V2 loop sequences occurs during transmission of certain genetic subtypes and may impact viral RNA levels. J. Virol. 2005, 79(10):6528-6531.
-
(2005)
J. Virol.
, vol.79
, Issue.10
, pp. 6528-6531
-
-
Chohan, B.1
Lang, D.2
Sagar, M.3
Korber, B.4
Lavreys, L.5
Richardson, B.6
Overbaugh, J.7
-
10
-
-
0037379188
-
The CCR5 and CXCR4 coreceptors are both used by human immunodeficiency virus type 1 primary isolates from subtype C
-
Cilliers T., Nhlapo J., Coetzer M., Orlovic D., Ketas T., Olson W.C., Moore J.P., Trkola A., Morris L. The CCR5 and CXCR4 coreceptors are both used by human immunodeficiency virus type 1 primary isolates from subtype C. J. Virol. 2003, 77(7):4449-4456.
-
(2003)
J. Virol.
, vol.77
, Issue.7
, pp. 4449-4456
-
-
Cilliers, T.1
Nhlapo, J.2
Coetzer, M.3
Orlovic, D.4
Ketas, T.5
Olson, W.C.6
Moore, J.P.7
Trkola, A.8
Morris, L.9
-
11
-
-
33644609596
-
CCR5 use by human immunodeficiency virus type 1 is associated closely with the gp120 V3 loop N-linked glycosylation site
-
Clevestig P., Pramanik L., Leitner T., Ehrnst A. CCR5 use by human immunodeficiency virus type 1 is associated closely with the gp120 V3 loop N-linked glycosylation site. J. Gen. Virol. 2006, 87(3):607-612.
-
(2006)
J. Gen. Virol.
, vol.87
, Issue.3
, pp. 607-612
-
-
Clevestig, P.1
Pramanik, L.2
Leitner, T.3
Ehrnst, A.4
-
12
-
-
33947204688
-
Longitudinal analysis of HIV type 1 subtype C envelope sequences from South Africa
-
Coetzer M., Cilliers T., Papathanasopoulos M., Ramjee G., Karim S.A., Williamson C., Morris L. Longitudinal analysis of HIV type 1 subtype C envelope sequences from South Africa. AIDS Res. Hum. Retroviruses 2007, 23(2):316-321.
-
(2007)
AIDS Res. Hum. Retroviruses
, vol.23
, Issue.2
, pp. 316-321
-
-
Coetzer, M.1
Cilliers, T.2
Papathanasopoulos, M.3
Ramjee, G.4
Karim, S.A.5
Williamson, C.6
Morris, L.7
-
13
-
-
33750979833
-
Genetic characteristics of the V3 region associated with CXCR4 usage in HIV-1 subtype C isolates
-
Coetzer M., Cilliers T., Ping L.H., Swanstrom R., Morris L. Genetic characteristics of the V3 region associated with CXCR4 usage in HIV-1 subtype C isolates. Virology 2006, 356(1-2):95-105.
-
(2006)
Virology
, vol.356
, Issue.1-2
, pp. 95-105
-
-
Coetzer, M.1
Cilliers, T.2
Ping, L.H.3
Swanstrom, R.4
Morris, L.5
-
14
-
-
42449109845
-
Emergence of X4 usage among HIV-1 subtype C: evidence for an evolving epidemic in South Africa
-
Connell B.J., Michler K., Capovilla A., Venter W.D., Stevens W.S., Papathanasopoulos M.A. Emergence of X4 usage among HIV-1 subtype C: evidence for an evolving epidemic in South Africa. AIDS 2008, 22(7):896-899.
-
(2008)
AIDS
, vol.22
, Issue.7
, pp. 896-899
-
-
Connell, B.J.1
Michler, K.2
Capovilla, A.3
Venter, W.D.4
Stevens, W.S.5
Papathanasopoulos, M.A.6
-
15
-
-
0026702003
-
Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: analysis by single amino acid substitution
-
De Jong J.J., De Ronde A., Keulen W., Tersmette M., Goudsmit J. Minimal requirements for the human immunodeficiency virus type 1 V3 domain to support the syncytium-inducing phenotype: analysis by single amino acid substitution. J. Virol. 1992, 66(11):6777-6780.
-
(1992)
J. Virol.
, vol.66
, Issue.11
, pp. 6777-6780
-
-
De Jong, J.J.1
De Ronde, A.2
Keulen, W.3
Tersmette, M.4
Goudsmit, J.5
-
16
-
-
77954067056
-
DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites
-
Deng W., Maust B.S., Nickle D.C., Learn G.H., Liu Y., Heath L., Kosakovsky Pond S.L., Mullins J.I. DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites. Biotechniques 2010, 48(5):405-408.
-
(2010)
Biotechniques
, vol.48
, Issue.5
, pp. 405-408
-
-
Deng, W.1
Maust, B.S.2
Nickle, D.C.3
Learn, G.H.4
Liu, Y.5
Heath, L.6
Kosakovsky Pond, S.L.7
Mullins, J.I.8
-
17
-
-
0032401179
-
Minimizing DNA recombination during long RT-PCR
-
Fang G., Zhu G., Burger H., Keithly J.S., Weiser B. Minimizing DNA recombination during long RT-PCR. J. Virol. Methods 1998, 76(1-2):139-148.
-
(1998)
J. Virol. Methods
, vol.76
, Issue.1-2
, pp. 139-148
-
-
Fang, G.1
Zhu, G.2
Burger, H.3
Keithly, J.S.4
Weiser, B.5
-
18
-
-
0030002637
-
HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor
-
Feng Y., Broder C.C., Kennedy P.E., Berger E.A. HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor. Science 1996, 272(5263):872-877.
-
(1996)
Science
, vol.272
, Issue.5263
, pp. 872-877
-
-
Feng, Y.1
Broder, C.C.2
Kennedy, P.E.3
Berger, E.A.4
-
19
-
-
0023790118
-
Distinct replicative and cytopathic characteristics of human immunodeficiency virus isolates
-
Fenyo E.M., Morfeldt-Manson L., Chiodi F., Lind B., von Gegerfelt A., Albert J., Olausson E., Asjo B. Distinct replicative and cytopathic characteristics of human immunodeficiency virus isolates. J. Virol. 1988, 62(11):4414-4419.
-
(1988)
J. Virol.
, vol.62
, Issue.11
, pp. 4414-4419
-
-
Fenyo, E.M.1
Morfeldt-Manson, L.2
Chiodi, F.3
Lind, B.4
von Gegerfelt, A.5
Albert, J.6
Olausson, E.7
Asjo, B.8
-
20
-
-
14844360667
-
V3: HIV's switch-hitter
-
Hartley O., Klasse P.J., Sattentau Q.J., Moore J.P. V3: HIV's switch-hitter. AIDS Res. Hum. Retroviruses 2005, 21(2):171-189.
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, Issue.2
, pp. 171-189
-
-
Hartley, O.1
Klasse, P.J.2
Sattentau, Q.J.3
Moore, J.P.4
-
21
-
-
0036196484
-
Variability in the human immunodeficiency virus type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop
-
Hoffman N.G., Seillier-Moiseiwitsch F., Ahn J., Walker J.M., Swanstrom R. Variability in the human immunodeficiency virus type 1 gp120 Env protein linked to phenotype-associated changes in the V3 loop. J. Virol. 2002, 76(8):3852-3864.
-
(2002)
J. Virol.
, vol.76
, Issue.8
, pp. 3852-3864
-
-
Hoffman, N.G.1
Seillier-Moiseiwitsch, F.2
Ahn, J.3
Walker, J.M.4
Swanstrom, R.5
-
22
-
-
0034466833
-
Evolution of the human immunodeficiency virus type 1 envelope during infection reveals molecular corollaries of specificity for coreceptor utilization and AIDS pathogenesis
-
Hu Q.X., Barry A.P., Wang Z.X., Connolly S.M., Peiper S.C., Greenberg M.L. Evolution of the human immunodeficiency virus type 1 envelope during infection reveals molecular corollaries of specificity for coreceptor utilization and AIDS pathogenesis. J. Virol. 2000, 74(24):11858-11872.
-
(2000)
J. Virol.
, vol.74
, Issue.24
, pp. 11858-11872
-
-
Hu, Q.X.1
Barry, A.P.2
Wang, Z.X.3
Connolly, S.M.4
Peiper, S.C.5
Greenberg, M.L.6
-
23
-
-
34547128097
-
Coreceptor tropism in human immunodeficiency virus type 1 subtype D: high prevalence of CXCR4 tropism and heterogeneous composition of viral populations
-
Huang W., Eshleman S.H., Toma J., Fransen S., Stawiski E., Paxinos E.E., Whitcomb J.M., Young A.M., Donnell D., Mmiro F., Musoke P., Guay L.A., Jackson J.B., Parkin N.T., Petropoulos C.J. Coreceptor tropism in human immunodeficiency virus type 1 subtype D: high prevalence of CXCR4 tropism and heterogeneous composition of viral populations. J. Virol. 2007, 81(15):7885-7893.
-
(2007)
J. Virol.
, vol.81
, Issue.15
, pp. 7885-7893
-
-
Huang, W.1
Eshleman, S.H.2
Toma, J.3
Fransen, S.4
Stawiski, E.5
Paxinos, E.E.6
Whitcomb, J.M.7
Young, A.M.8
Donnell, D.9
Mmiro, F.10
Musoke, P.11
Guay, L.A.12
Jackson, J.B.13
Parkin, N.T.14
Petropoulos, C.J.15
-
24
-
-
0028136695
-
Standardized microtiter assay for determination of syncytium-inducing phenotypes of clinical human immunodeficiency virus type 1 isolates
-
Japour A.J., Fiscus S.A., Arduino J.M., Mayers D.L., Reichelderfer P.S., Kuritzkes D.R. Standardized microtiter assay for determination of syncytium-inducing phenotypes of clinical human immunodeficiency virus type 1 isolates. J. Clin. Microbiol. 1994, 32(9):2291-2294.
-
(1994)
J. Clin. Microbiol.
, vol.32
, Issue.9
, pp. 2291-2294
-
-
Japour, A.J.1
Fiscus, S.A.2
Arduino, J.M.3
Mayers, D.L.4
Reichelderfer, P.S.5
Kuritzkes, D.R.6
-
25
-
-
33646444564
-
A reliable phenotype predictor for human immunodeficiency virus type 1 subtype C based on envelope V3 sequences
-
Jensen M.A., Coetzer M., van't Wout A.B., Morris L., Mullins J.I. A reliable phenotype predictor for human immunodeficiency virus type 1 subtype C based on envelope V3 sequences. J. Virol. 2006, 80(10):4698-4704.
-
(2006)
J. Virol.
, vol.80
, Issue.10
, pp. 4698-4704
-
-
Jensen, M.A.1
Coetzer, M.2
van't Wout, A.B.3
Morris, L.4
Mullins, J.I.5
-
26
-
-
0038805436
-
High frequency of syncytium-inducing and CXCR4-tropic viruses among human immunodeficiency virus type 1 subtype C-infected patients receiving antiretroviral treatment
-
Johnston E.R., Zijenah L.S., Mutetwa S., Kantor R., Kittinunvorakoon C., Katzenstein D.A. High frequency of syncytium-inducing and CXCR4-tropic viruses among human immunodeficiency virus type 1 subtype C-infected patients receiving antiretroviral treatment. J. Virol. 2003, 77(13):7682-7688.
-
(2003)
J. Virol.
, vol.77
, Issue.13
, pp. 7682-7688
-
-
Johnston, E.R.1
Zijenah, L.S.2
Mutetwa, S.3
Kantor, R.4
Kittinunvorakoon, C.5
Katzenstein, D.A.6
-
27
-
-
77955095289
-
Comparison of standard PCR/cloning to single genome sequencing for analysis of HIV-1 populations
-
Jordan M.R., Kearney M., Palmer S., Shao W., Maldarelli F., Coakley E.P., Chappey C., Wanke C., Coffin J.M. Comparison of standard PCR/cloning to single genome sequencing for analysis of HIV-1 populations. J. Virol. Methods 2010, 168(1-2):114-120.
-
(2010)
J. Virol. Methods
, vol.168
, Issue.1-2
, pp. 114-120
-
-
Jordan, M.R.1
Kearney, M.2
Palmer, S.3
Shao, W.4
Maldarelli, F.5
Coakley, E.P.6
Chappey, C.7
Wanke, C.8
Coffin, J.M.9
-
28
-
-
34249336735
-
High throughput functional analysis of HIV-1 env genes without cloning
-
Kirchherr J.L., Lu X., Kasongo W., Chalwe V., Mwananyanda L., Musonda R.M., Xia S.M., Scearce R.M., Liao H.X., Montefiori D.C., Haynes B.F., Gao F. High throughput functional analysis of HIV-1 env genes without cloning. J. Virol. Methods 2007, 143(1):104-111.
-
(2007)
J. Virol. Methods
, vol.143
, Issue.1
, pp. 104-111
-
-
Kirchherr, J.L.1
Lu, X.2
Kasongo, W.3
Chalwe, V.4
Mwananyanda, L.5
Musonda, R.M.6
Xia, S.M.7
Scearce, R.M.8
Liao, H.X.9
Montefiori, D.C.10
Haynes, B.F.11
Gao, F.12
-
29
-
-
0027537480
-
Prognostic value of HIV-1 syncytium-inducing phenotype for rate of CD4+ cell depletion and progression to AIDS
-
Koot M., Keet I.P., Vos A.H., de Goede R.E., Roos M.T., Coutinho R.A., Miedema F., Schellekens P.T., Tersmette M. Prognostic value of HIV-1 syncytium-inducing phenotype for rate of CD4+ cell depletion and progression to AIDS. Ann. Intern. Med. 1993, 118(9):681-688.
-
(1993)
Ann. Intern. Med.
, vol.118
, Issue.9
, pp. 681-688
-
-
Koot, M.1
Keet, I.P.2
Vos, A.H.3
de Goede, R.E.4
Roos, M.T.5
Coutinho, R.A.6
Miedema, F.7
Schellekens, P.T.8
Tersmette, M.9
-
30
-
-
0027297096
-
Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis
-
Korber B.T., Farber R.M., Wolpert D.H., Lapedes A.S. Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis. Proc. Natl. Acad. Sci. USA 1993, 90(15):7176-7180.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, Issue.15
, pp. 7176-7180
-
-
Korber, B.T.1
Farber, R.M.2
Wolpert, D.H.3
Lapedes, A.S.4
-
31
-
-
33845361366
-
GARD: a genetic algorithm for recombination detection
-
Kosakovsky Pond S.L., Posada D., Gravenor M.B., Woelk C.H., Frost S.D. GARD: a genetic algorithm for recombination detection. Bioinformatics 2006, 22(24):3096-3098.
-
(2006)
Bioinformatics
, vol.22
, Issue.24
, pp. 3096-3098
-
-
Kosakovsky Pond, S.L.1
Posada, D.2
Gravenor, M.B.3
Woelk, C.H.4
Frost, S.D.5
-
32
-
-
0028294049
-
MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers
-
Kumar S., Tamura K., Nei M. MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers. Comput. Appl. Biosci. 1994, 10(2):189-191.
-
(1994)
Comput. Appl. Biosci.
, vol.10
, Issue.2
, pp. 189-191
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
33
-
-
0035000767
-
Cooperation of the V1/V2 and V3 domains of human immunodeficiency virus type 1 gp120 for interaction with the CXCR4 receptor
-
Labrosse B., Treboute C., Brelot A., Alizon M. Cooperation of the V1/V2 and V3 domains of human immunodeficiency virus type 1 gp120 for interaction with the CXCR4 receptor. J. Virol. 2001, 75(12):5457-5464.
-
(2001)
J. Virol.
, vol.75
, Issue.12
, pp. 5457-5464
-
-
Labrosse, B.1
Treboute, C.2
Brelot, A.3
Alizon, M.4
-
34
-
-
33751224478
-
Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa
-
Li M., Salazar-Gonzalez J.F., Derdeyn C.A., Morris L., Williamson C., Robinson J.E., Decker J.M., Li Y., Salazar M.G., Polonis V.R., Mlisana K., Karim S.A., Hong K., Greene K.M., Bilska M., Zhou J., Allen S., Chomba E., Mulenga J., Vwalika C., Gao F., Zhang M., Korber B.T., Hunter E., Hahn B.H., Montefiori D.C. Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa. J. Virol. 2006, 80(23):11776-11790.
-
(2006)
J. Virol.
, vol.80
, Issue.23
, pp. 11776-11790
-
-
Li, M.1
Salazar-Gonzalez, J.F.2
Derdeyn, C.A.3
Morris, L.4
Williamson, C.5
Robinson, J.E.6
Decker, J.M.7
Li, Y.8
Salazar, M.G.9
Polonis, V.R.10
Mlisana, K.11
Karim, S.A.12
Hong, K.13
Greene, K.M.14
Bilska, M.15
Zhou, J.16
Allen, S.17
Chomba, E.18
Mulenga, J.19
Vwalika, C.20
Gao, F.21
Zhang, M.22
Korber, B.T.23
Hunter, E.24
Hahn, B.H.25
Montefiori, D.C.26
more..
-
35
-
-
77956185778
-
The design and validation of a novel phenotypic assay to determine HIV-1 coreceptor usage of clinical isolates
-
Lin N.H., Negusse D.M., Beroukhim R., Giguel F., Lockman S., Essex M., Kuritzkes D.R. The design and validation of a novel phenotypic assay to determine HIV-1 coreceptor usage of clinical isolates. J. Virol. Methods 2010, 169(1):39-46.
-
(2010)
J. Virol. Methods
, vol.169
, Issue.1
, pp. 39-46
-
-
Lin, N.H.1
Negusse, D.M.2
Beroukhim, R.3
Giguel, F.4
Lockman, S.5
Essex, M.6
Kuritzkes, D.R.7
-
36
-
-
79955038304
-
Prevalence and clinical associations of CXCR4-using HIV-1 among treatment-naive subtype C-infected women in Botswana
-
Lin N.H., Smeaton L.M., Giguel F., Novitsky V., Moyo S., Mitchell R.M., Makhema J., Essex M., Lockman S., Kuritzkes D.R. Prevalence and clinical associations of CXCR4-using HIV-1 among treatment-naive subtype C-infected women in Botswana. J. Acquir. Immune Defic. Syndr. 2011, 57(1):46-50.
-
(2011)
J. Acquir. Immune Defic. Syndr.
, vol.57
, Issue.1
, pp. 46-50
-
-
Lin, N.H.1
Smeaton, L.M.2
Giguel, F.3
Novitsky, V.4
Moyo, S.5
Mitchell, R.M.6
Makhema, J.7
Essex, M.8
Lockman, S.9
Kuritzkes, D.R.10
-
37
-
-
0029817259
-
HIV quasispecies and resampling
-
Liu S.L., Rodrigo A.G., Shankarappa R., Learn G.H., Hsu L., Davidov O., Zhao L.P., Mullins J.I. HIV quasispecies and resampling. Science 1996, 273(5274):415-416.
-
(1996)
Science
, vol.273
, Issue.5274
, pp. 415-416
-
-
Liu, S.L.1
Rodrigo, A.G.2
Shankarappa, R.3
Learn, G.H.4
Hsu, L.5
Davidov, O.6
Zhao, L.P.7
Mullins, J.I.8
-
38
-
-
33846156885
-
Response to antiretroviral therapy after a single, peripartum dose of nevirapine
-
Lockman S., Shapiro R.L., Smeaton L.M., Wester C., Thior I., Stevens L., Chand F., Makhema J., Moffat C., Asmelash A., Ndase P., Arimi P., van Widenfelt E., Mazhani L., Novitsky V., Lagakos S., Essex M. Response to antiretroviral therapy after a single, peripartum dose of nevirapine. N. Engl. J. Med. 2007, 356(2):135-147.
-
(2007)
N. Engl. J. Med.
, vol.356
, Issue.2
, pp. 135-147
-
-
Lockman, S.1
Shapiro, R.L.2
Smeaton, L.M.3
Wester, C.4
Thior, I.5
Stevens, L.6
Chand, F.7
Makhema, J.8
Moffat, C.9
Asmelash, A.10
Ndase, P.11
Arimi, P.12
van Widenfelt, E.13
Mazhani, L.14
Novitsky, V.15
Lagakos, S.16
Essex, M.17
-
39
-
-
0028917760
-
Genetic diversity of the envelope glycoprotein from human immunodeficiency virus type 1 isolates of African origin
-
Louwagie J., Janssens W., Mascola J., Heyndrickx L., Hegerich P., van der Groen G., McCutchan F.E., Burke D.S. Genetic diversity of the envelope glycoprotein from human immunodeficiency virus type 1 isolates of African origin. J. Virol. 1995, 69(1):263-271.
-
(1995)
J. Virol.
, vol.69
, Issue.1
, pp. 263-271
-
-
Louwagie, J.1
Janssens, W.2
Mascola, J.3
Heyndrickx, L.4
Hegerich, P.5
van der Groen, G.6
McCutchan, F.E.7
Burke, D.S.8
-
40
-
-
0023028190
-
The T4 gene encodes the AIDS virus receptor and is expressed in the immune system and the brain
-
Maddon P.J., Dalgleish A.G., McDougal J.S., Clapham P.R., Weiss R.A., Axel R. The T4 gene encodes the AIDS virus receptor and is expressed in the immune system and the brain. Cell 1986, 47(3):333-348.
-
(1986)
Cell
, vol.47
, Issue.3
, pp. 333-348
-
-
Maddon, P.J.1
Dalgleish, A.G.2
McDougal, J.S.3
Clapham, P.R.4
Weiss, R.A.5
Axel, R.6
-
41
-
-
0022587282
-
Binding of HTLV-III/LAV to T4+ T cells by a complex of the 110K viral protein and the T4 molecule
-
McDougal J.S., Kennedy M.S., Sligh J.M., Cort S.P., Mawle A., Nicholson J.K. Binding of HTLV-III/LAV to T4+ T cells by a complex of the 110K viral protein and the T4 molecule. Science 1986, 231(4736):382-385.
-
(1986)
Science
, vol.231
, Issue.4736
, pp. 382-385
-
-
McDougal, J.S.1
Kennedy, M.S.2
Sligh, J.M.3
Cort, S.P.4
Mawle, A.5
Nicholson, J.K.6
-
42
-
-
33746160257
-
HIV-1 coreceptor use in triple-class treatment-experienced patients: baseline prevalence, correlates, and relationship to enfuvirtide response
-
Melby T., Despirito M., Demasi R., Heilek-Snyder G., Greenberg M.L., Graham N. HIV-1 coreceptor use in triple-class treatment-experienced patients: baseline prevalence, correlates, and relationship to enfuvirtide response. J. Infect. Dis. 2006, 194(2):238-246.
-
(2006)
J. Infect. Dis.
, vol.194
, Issue.2
, pp. 238-246
-
-
Melby, T.1
Despirito, M.2
Demasi, R.3
Heilek-Snyder, G.4
Greenberg, M.L.5
Graham, N.6
-
44
-
-
44349093061
-
Genotypic characterization and comparison of full-length envelope glycoproteins from South African HIV type 1 subtype C primary isolates that utilize CCR5 and/or CXCR4
-
Michler K., Connell B.J., Venter W.D., Stevens W.S., Capovilla A., Papathanasopoulos M.A. Genotypic characterization and comparison of full-length envelope glycoproteins from South African HIV type 1 subtype C primary isolates that utilize CCR5 and/or CXCR4. AIDS Res. Hum. Retroviruses 2008, 24(5):743-751.
-
(2008)
AIDS Res. Hum. Retroviruses
, vol.24
, Issue.5
, pp. 743-751
-
-
Michler, K.1
Connell, B.J.2
Venter, W.D.3
Stevens, W.S.4
Capovilla, A.5
Papathanasopoulos, M.A.6
-
45
-
-
33646491049
-
HIV-1 subtype C in vitro growth and coreceptor utilization
-
Ndung'u T., Sepako E., McLane M.F., Chand F., Bedi K., Gaseitsiwe S., Doualla-Bell F., Peter T., Thior I., Moyo S.M., Gilbert P.B., Novitsky V.A., Essex M. HIV-1 subtype C in vitro growth and coreceptor utilization. Virology 2006, 347(2):247-260.
-
(2006)
Virology
, vol.347
, Issue.2
, pp. 247-260
-
-
Ndung'u, T.1
Sepako, E.2
McLane, M.F.3
Chand, F.4
Bedi, K.5
Gaseitsiwe, S.6
Doualla-Bell, F.7
Peter, T.8
Thior, I.9
Moyo, S.M.10
Gilbert, P.B.11
Novitsky, V.A.12
Essex, M.13
-
46
-
-
0042696197
-
Importance and detection of virus reservoirs and compartments of HIV infection
-
Nickle D.C., Shriner D., Mittler J.E., Frenkel L.M., Mullins J.I. Importance and detection of virus reservoirs and compartments of HIV infection. Curr. Opin. Microbiol. 2003, 6(4):410-416.
-
(2003)
Curr. Opin. Microbiol.
, vol.6
, Issue.4
, pp. 410-416
-
-
Nickle, D.C.1
Shriner, D.2
Mittler, J.E.3
Frenkel, L.M.4
Mullins, J.I.5
-
47
-
-
37849007571
-
Effects of partial deletions within the human immunodeficiency virus type 1 V3 loop on coreceptor tropism and sensitivity to entry inhibitors
-
Nolan K.M., Jordan A.P., Hoxie J.A. Effects of partial deletions within the human immunodeficiency virus type 1 V3 loop on coreceptor tropism and sensitivity to entry inhibitors. J. Virol. 2008, 82(2):664-673.
-
(2008)
J. Virol.
, vol.82
, Issue.2
, pp. 664-673
-
-
Nolan, K.M.1
Jordan, A.P.2
Hoxie, J.A.3
-
48
-
-
0036471553
-
Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000
-
Osmanov S., Pattou C., Walker N., Schwardlander B., Esparza J. Estimated global distribution and regional spread of HIV-1 genetic subtypes in the year 2000. J. Acquir. Immune Defic. Syndr. 2002, 29(2):184-190.
-
(2002)
J. Acquir. Immune Defic. Syndr.
, vol.29
, Issue.2
, pp. 184-190
-
-
Osmanov, S.1
Pattou, C.2
Walker, N.3
Schwardlander, B.4
Esparza, J.5
-
49
-
-
0036375073
-
Full-length genome analysis of HIV-1 subtype C utilizing CXCR4 and intersubtype recombinants isolated in South Africa
-
Papathanasopoulos M.A., Cilliers T., Morris L., Mokili J.L., Dowling W., Birx D.L., McCutchan F.E. Full-length genome analysis of HIV-1 subtype C utilizing CXCR4 and intersubtype recombinants isolated in South Africa. AIDS Res. Hum. Retroviruses 2002, 18(12):879-886.
-
(2002)
AIDS Res. Hum. Retroviruses
, vol.18
, Issue.12
, pp. 879-886
-
-
Papathanasopoulos, M.A.1
Cilliers, T.2
Morris, L.3
Mokili, J.L.4
Dowling, W.5
Birx, D.L.6
McCutchan, F.E.7
-
50
-
-
0032789087
-
Characterization of V3 sequence heterogeneity in subtype C human immunodeficiency virus type 1 isolates from Malawi: underrepresentation of X4 variants
-
Ping L.H., Nelson J.A., Hoffman I.F., Schock J., Lamers S.L., Goodman M., Vernazza P., Kazembe P., Maida M., Zimba D., Goodenow M.M., Eron J.J., Fiscus S.A., Cohen M.S., Swanstrom R. Characterization of V3 sequence heterogeneity in subtype C human immunodeficiency virus type 1 isolates from Malawi: underrepresentation of X4 variants. J. Virol. 1999, 73(8):6271-6281.
-
(1999)
J. Virol.
, vol.73
, Issue.8
, pp. 6271-6281
-
-
Ping, L.H.1
Nelson, J.A.2
Hoffman, I.F.3
Schock, J.4
Lamers, S.L.5
Goodman, M.6
Vernazza, P.7
Kazembe, P.8
Maida, M.9
Zimba, D.10
Goodenow, M.M.11
Eron, J.J.12
Fiscus, S.A.13
Cohen, M.S.14
Swanstrom, R.15
-
51
-
-
12144287132
-
Phenotypic and genotypic comparisons of CCR5- and CXCR4-tropic human immunodeficiency virus type 1 biological clones isolated from subtype C-infected individuals
-
Pollakis G., Abebe A., Kliphuis A., Chalaby M.I., Bakker M., Mengistu Y., Brouwer M., Goudsmit J., Schuitemaker H., Paxton W.A. Phenotypic and genotypic comparisons of CCR5- and CXCR4-tropic human immunodeficiency virus type 1 biological clones isolated from subtype C-infected individuals. J. Virol. 2004, 78(6):2841-2852.
-
(2004)
J. Virol.
, vol.78
, Issue.6
, pp. 2841-2852
-
-
Pollakis, G.1
Abebe, A.2
Kliphuis, A.3
Chalaby, M.I.4
Bakker, M.5
Mengistu, Y.6
Brouwer, M.7
Goudsmit, J.8
Schuitemaker, H.9
Paxton, W.A.10
-
52
-
-
0035918220
-
N-linked glycosylation of the HIV type-1 gp120 envelope glycoprotein as a major determinant of CCR5 and CXCR4 coreceptor utilization
-
Pollakis G., Kang S., Kliphuis A., Chalaby M.I., Goudsmit J., Paxton W.A. N-linked glycosylation of the HIV type-1 gp120 envelope glycoprotein as a major determinant of CCR5 and CXCR4 coreceptor utilization. J. Biol. Chem. 2001, 276(16):13433-13441.
-
(2001)
J. Biol. Chem.
, vol.276
, Issue.16
, pp. 13433-13441
-
-
Pollakis, G.1
Kang, S.2
Kliphuis, A.3
Chalaby, M.I.4
Goudsmit, J.5
Paxton, W.A.6
-
53
-
-
0036935266
-
The N-linked glycan g15 within the V3 loop of the HIV-1 external glycoprotein gp120 affects coreceptor usage, cellular tropism, and neutralization
-
Polzer S., Dittmar M.T., Schmitz H., Schreiber M. The N-linked glycan g15 within the V3 loop of the HIV-1 external glycoprotein gp120 affects coreceptor usage, cellular tropism, and neutralization. Virology 2002, 304(1):70-80.
-
(2002)
Virology
, vol.304
, Issue.1
, pp. 70-80
-
-
Polzer, S.1
Dittmar, M.T.2
Schmitz, H.3
Schreiber, M.4
-
54
-
-
0028027078
-
The impact of the syncytium-inducing phenotype of human immunodeficiency virus on disease progression
-
Richman D.D., Bozzette S.A. The impact of the syncytium-inducing phenotype of human immunodeficiency virus on disease progression. J. Infect. Dis. 1994, 169(5):968-974.
-
(1994)
J. Infect. Dis.
, vol.169
, Issue.5
, pp. 968-974
-
-
Richman, D.D.1
Bozzette, S.A.2
-
56
-
-
0026089184
-
Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene
-
Shioda T., Levy J.A., Cheng-Mayer C. Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene. Nature 1991, 349(6305):167-169.
-
(1991)
Nature
, vol.349
, Issue.6305
, pp. 167-169
-
-
Shioda, T.1
Levy, J.A.2
Cheng-Mayer, C.3
-
57
-
-
70349319355
-
Functional and genetic analysis of coreceptor usage by dualtropic HIV-1 subtype C isolates
-
Singh A., Page T., Moore P.L., Allgaier R.L., Hiramen K., Coovadia H.M., Walker B.D., Morris L., Ndung'u T. Functional and genetic analysis of coreceptor usage by dualtropic HIV-1 subtype C isolates. Virology 2009, 393(1):56-67.
-
(2009)
Virology
, vol.393
, Issue.1
, pp. 56-67
-
-
Singh, A.1
Page, T.2
Moore, P.L.3
Allgaier, R.L.4
Hiramen, K.5
Coovadia, H.M.6
Walker, B.D.7
Morris, L.8
Ndung'u, T.9
-
58
-
-
33847272713
-
Mutations in the V3 stem versus the V3 crown and C4 region have different effects on the binding and fusion steps of human immunodeficiency virus type 1 gp120 interaction with the CCR5 coreceptor
-
Suphaphiphat P., Essex M., Lee T.H. Mutations in the V3 stem versus the V3 crown and C4 region have different effects on the binding and fusion steps of human immunodeficiency virus type 1 gp120 interaction with the CCR5 coreceptor. Virology 2007, 360(1):182-190.
-
(2007)
Virology
, vol.360
, Issue.1
, pp. 182-190
-
-
Suphaphiphat, P.1
Essex, M.2
Lee, T.H.3
-
59
-
-
33747099592
-
Breastfeeding plus infant zidovudine prophylaxis for 6 months vs. formula feeding plus infant zidovudine for 1 month to reduce mother-to-child HIV transmission in Botswana: a randomized trial: the Mashi Study
-
Thior I., Lockman S., Smeaton L.M., Shapiro R.L., Wester C., Heymann S.J., Gilbert P.B., Stevens L., Peter T., Kim S., van Widenfelt E., Moffat C., Ndase P., Arimi P., Kebaabetswe P., Mazonde P., Makhema J., McIntosh K., Novitsky V., Lee T.H., Marlink R., Lagakos S., Essex M. Breastfeeding plus infant zidovudine prophylaxis for 6 months vs. formula feeding plus infant zidovudine for 1 month to reduce mother-to-child HIV transmission in Botswana: a randomized trial: the Mashi Study. J. Am. Med. Assoc. 2006, 296(7):794-805.
-
(2006)
J. Am. Med. Assoc.
, vol.296
, Issue.7
, pp. 794-805
-
-
Thior, I.1
Lockman, S.2
Smeaton, L.M.3
Shapiro, R.L.4
Wester, C.5
Heymann, S.J.6
Gilbert, P.B.7
Stevens, L.8
Peter, T.9
Kim, S.10
van Widenfelt, E.11
Moffat, C.12
Ndase, P.13
Arimi, P.14
Kebaabetswe, P.15
Mazonde, P.16
Makhema, J.17
McIntosh, K.18
Novitsky, V.19
Lee, T.H.20
Marlink, R.21
Lagakos, S.22
Essex, M.23
more..
-
60
-
-
0033081242
-
Primary subtype C HIV-1 infection in Harare, Zimbabwe
-
Tien P.C., Chiu T., Latif A., Ray S., Batra M., Contag C.H., Zejena L., Mbizvo M., Delwart E.L., Mullins J.I., Katzenstein D.A. Primary subtype C HIV-1 infection in Harare, Zimbabwe. J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 1999, 20(2):147-153.
-
(1999)
J. Acquir. Immune Defic. Syndr. Hum. Retrovirol.
, vol.20
, Issue.2
, pp. 147-153
-
-
Tien, P.C.1
Chiu, T.2
Latif, A.3
Ray, S.4
Batra, M.5
Contag, C.H.6
Zejena, L.7
Mbizvo, M.8
Delwart, E.L.9
Mullins, J.I.10
Katzenstein, D.A.11
-
61
-
-
0031963975
-
Genetic subtype-independent inhibition of human immunodeficiency virus type 1 replication by CC and CXC chemokines
-
Trkola A., Paxton W.A., Monard S.P., Hoxie J.A., Siani M.A., Thompson D.A., Wu L., Mackay C.R., Horuk R., Moore J.P. Genetic subtype-independent inhibition of human immunodeficiency virus type 1 replication by CC and CXC chemokines. J. Virol. 1998, 72(1):396-404.
-
(1998)
J. Virol.
, vol.72
, Issue.1
, pp. 396-404
-
-
Trkola, A.1
Paxton, W.A.2
Monard, S.P.3
Hoxie, J.A.4
Siani, M.A.5
Thompson, D.A.6
Wu, L.7
Mackay, C.R.8
Horuk, R.9
Moore, J.P.10
-
62
-
-
0032519399
-
Differences in chemokine coreceptor usage between genetic subtypes of HIV-1
-
Tscherning C., Alaeus A., Fredriksson R., Bjorndal A., Deng H., Littman D.R., Fenyo E.M., Albert J. Differences in chemokine coreceptor usage between genetic subtypes of HIV-1. Virology 1998, 241(2):181-188.
-
(1998)
Virology
, vol.241
, Issue.2
, pp. 181-188
-
-
Tscherning, C.1
Alaeus, A.2
Fredriksson, R.3
Bjorndal, A.4
Deng, H.5
Littman, D.R.6
Fenyo, E.M.7
Albert, J.8
-
63
-
-
84867200523
-
-
UNAIDS. UNAIDS: AIDS Epidemic Update. UNAIDS, Ed.
-
UNAIDS, 2009. UNAIDS: AIDS Epidemic Update. UNAIDS, Ed.
-
(2009)
-
-
-
64
-
-
0037032945
-
Change in co-receptor usage of current South African HIV-1 subtype C primary isolates
-
van Rensburg E.J., Smith T.L., Zeier M., Robson B., Sampson C., Treurnicht F., Engelbrecht S. Change in co-receptor usage of current South African HIV-1 subtype C primary isolates. AIDS 2002, 16(18):2479-2480.
-
(2002)
AIDS
, vol.16
, Issue.18
, pp. 2479-2480
-
-
van Rensburg, E.J.1
Smith, T.L.2
Zeier, M.3
Robson, B.4
Sampson, C.5
Treurnicht, F.6
Engelbrecht, S.7
-
65
-
-
77956921525
-
Molecular determinants of HIV-1 subtype C coreceptor transition from R5 to R5×4
-
Zhang H., Tully D.C., Zhang T., Moriyama H., Thompson J., Wood C. Molecular determinants of HIV-1 subtype C coreceptor transition from R5 to R5×4. Virology 2010, 407(1):68-79.
-
(2010)
Virology
, vol.407
, Issue.1
, pp. 68-79
-
-
Zhang, H.1
Tully, D.C.2
Zhang, T.3
Moriyama, H.4
Thompson, J.5
Wood, C.6
-
66
-
-
16044364731
-
HIV-1 subtype and second-receptor use
-
Zhang L., Huang Y., He T., Cao Y., Ho D.D. HIV-1 subtype and second-receptor use. Nature 1996, 383(6603):768.
-
(1996)
Nature
, vol.383
, Issue.6603
, pp. 768
-
-
Zhang, L.1
Huang, Y.2
He, T.3
Cao, Y.4
Ho, D.D.5
-
67
-
-
9744280420
-
Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin
-
Zhang M., Gaschen B., Blay W., Foley B., Haigwood N., Kuiken C., Korber B. Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin. Glycobiology 2004, 14(12):1229-1246.
-
(2004)
Glycobiology
, vol.14
, Issue.12
, pp. 1229-1246
-
-
Zhang, M.1
Gaschen, B.2
Blay, W.3
Foley, B.4
Haigwood, N.5
Kuiken, C.6
Korber, B.7
|