메뉴 건너뛰기




Volumn 62, Issue 10, 2012, Pages 2395-2399

Pseudonocardia xishanensis sp. nov., an endophytic actinomycete isolated from the roots of Artemisia annua L

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84867161501     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.037028-0     Document Type: Article
Times cited : (17)

References (39)
  • 2
    • 0017682064 scopus 로고
    • Distribution of menaquinones in actinomycetes and corynebacteria
    • Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
    • (1977) J Gen Microbiol , vol.100 , pp. 221-230
    • Collins, M.D.1    Pirouz, T.2    Goodfellow, M.3    Minnikin, D.E.4
  • 4
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 5
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 6
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-789.
    • (1985) Evolution , vol.39 , pp. 783-789
    • Felsenstein, J.1
  • 7
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 10
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa, T., Takizawa, M. & Tanida, S. (1983). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Microbiol 29, 319-322.
    • (1983) J Gen Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 11
    • 0001633459 scopus 로고
    • Humic acid-vitamin agar, a new medium for selective isolation of soil actinomycetes
    • Hayakawa, M. & Nonomura, H. (1987). Humic acid-vitamin agar, a new medium for selective isolation of soil actinomycetes. J Ferment Technol 65, 501-509.
    • (1987) J Ferment Technol , vol.65 , pp. 501-509
    • Hayakawa, M.1    Nonomura, H.2
  • 13
    • 34250956819 scopus 로고
    • Beiträge zur Morphologie und Systematik der thermophilen Actinomyceten
    • Henssen, A. (1957). Beiträge zur Morphologie und Systematik der thermophilen Actinomyceten. Arch Mikrobiol 26, 373-414.
    • (1957) Arch Mikrobiol , vol.26 , pp. 373-414
    • Henssen, A.1
  • 14
    • 0035989580 scopus 로고    scopus 로고
    • Proposal to combine the genera Actinobispora and Pseudonocardia in an emended genus Pseudonocardia, and description of Pseudonocardia zijingensis sp. nov
    • Huang, Y., Wang, L., Lu, Z., Hong, L., Liu, Z., Tan, G.Y.A. &Goodfellow, M. (2002). Proposal to combine the genera Actinobispora and Pseudonocardia in an emended genus Pseudonocardia, and description of Pseudonocardia zijingensis sp. nov. Int J Syst Evol Microbiol 52, 977-982.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 977-982
    • Huang, Y.1    Wang, L.2    Lu, Z.3    Hong, L.4    Liu, Z.5    Tan, G.Y.A.6    Goodfellow, M.7
  • 17
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier, M. P. & Lechevalier, H. A. (1970). Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 20, 435-443.
    • (1970) Int J Syst Bacteriol , vol.20 , pp. 435-443
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 19
    • 34547447107 scopus 로고    scopus 로고
    • Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia
    • Li, W.-J., Xu, P., Schumann, P., Zhang, Y.-Q., Pukall, R., Xu, L.-H., Stackebrandt, E. & Jiang, C.-L. (2007). Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China), and emended description of the genus Georgenia. Int J Syst Evol Microbiol 57, 1424-1428.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1424-1428
    • Li, W.-J.1    Xu, P.2    Schumann, P.3    Zhang, Y.-Q.4    Pukall, R.5    Xu, L.-H.6    Stackebrandt, E.7    Jiang, C.-L.8
  • 20
  • 21
    • 0028294264 scopus 로고
    • The phylogenetic position of Pseudoamycolata halophobica (Akimov et al. 1989) and a proposal to reclassify it as Pseudonocardia halophobica
    • McVeigh, H. P., Munro, J. & Embley, T. M. (1994). The phylogenetic position of Pseudoamycolata halophobica (Akimov et al. 1989) and a proposal to reclassify it as Pseudonocardia halophobica. Int J Syst Bacteriol 44, 300-302.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 300-302
    • McVeigh, H.P.1    Munro, J.2    Embley, T.M.3
  • 22
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 23
    • 0018393563 scopus 로고
    • Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa
    • Minnikin, D. E., Collins, M. D. & Goodfellow, M. (1979). Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47, 87-95.
    • (1979) J Appl Bacteriol , vol.47 , pp. 87-95
    • Minnikin, D.E.1    Collins, M.D.2    Goodfellow, M.3
  • 24
    • 0018834020 scopus 로고
    • Thin layer chromatography of methanolysates of mycolic acid-containing bacteria
    • Minnikin, D. E., Hutchinson, I. G., Caldicott, A. B. & Goodfellow, M. (1980). Thin layer chromatography of methanolysates of mycolic acid-containing bacteria. J Chromatogr A 188, 221-233.
    • (1980) J Chromatogr A , vol.188 , pp. 221-233
    • Minnikin, D.E.1    Hutchinson, I.G.2    Caldicott, A.B.3    Goodfellow, M.4
  • 25
    • 55849085032 scopus 로고    scopus 로고
    • Pseudonocardia carboxydivorans sp. nov., a carbon monoxide-oxidizing actinomycete, and an emended description of the genus Pseudonocardia
    • Park, S. W., Park, S. T., Lee, J. E. & Kim, Y. M. (2008). Pseudonocardia carboxydivorans sp. nov., a carbon monoxide-oxidizing actinomycete, and an emended description of the genus Pseudonocardia. Int J Syst Evol Microbiol 58, 2475-2478.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2475-2478
    • Park, S.W.1    Park, S.T.2    Lee, J.E.3    Kim, Y.M.4
  • 26
    • 84957363038 scopus 로고
    • The utilization of carbon compounds by some Actinomycetales as an aid for species determination
    • Pridham, T. G. & Gottlieb, G. (1948). The utilization of carbon compounds by some Actinomycetales as an aid for species determination. J Bacteriol 56, 107-114.
    • (1948) J Bacteriol , vol.56 , pp. 107-114
    • Pridham, T.G.1    Gottlieb, G.2
  • 27
    • 0031744640 scopus 로고    scopus 로고
    • Pseudonocardia asaccharolytica sp. nov. and Pseudonocardia sulfidoxydans sp. nov., two new dimethyl disulfide-degrading actinomycetes and emended description of the genus Pseudonocardia
    • Reichert, K., Lipski, A., Pradella, S., Stackebrandt, E. & Altendorf, K. (1998). Pseudonocardia asaccharolytica sp. nov. and Pseudonocardia sulfidoxydans sp. nov., two new dimethyl disulfide-degrading actinomycetes and emended description of the genus Pseudonocardia. Int J Syst Bacteriol 48, 441-449.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 441-449
    • Reichert, K.1    Lipski, A.2    Pradella, S.3    Stackebrandt, E.4    Altendorf, K.5
  • 28
    • 0026660413 scopus 로고
    • A simple method for estimating and testing minimum-evolution trees
    • Rzhetsky, A. & Nei, M. (1992). A simple method for estimating and testing minimum-evolution trees. Mol Biol Evol 9, 945-967.
    • (1992) Mol Biol Evol , vol.9 , pp. 945-967
    • Rzhetsky, A.1    Nei, M.2
  • 29
    • 0027185401 scopus 로고
    • Theoretical foundation of the minimum-evolution method of phylogenetic inference
    • Rzhetsky, A. & Nei, M. (1993). Theoretical foundation of the minimum-evolution method of phylogenetic inference. Mol Biol Evol 10, 1073-1095.
    • (1993) Mol Biol Evol , vol.10 , pp. 1073-1095
    • Rzhetsky, A.1    Nei, M.2
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 32
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • In, Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 33
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 34
    • 0020638681 scopus 로고
    • Analysis of bacterial menaquinone mixtures by high performance liquid chromatography
    • Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J Appl Bacteriol 54, 31-36.
    • (1983) J Appl Bacteriol , vol.54 , pp. 31-36
    • Tamaoka, J.1    Katayama-Fujimura, Y.2    Kuraishi, H.3
  • 35
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 37
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 38
    • 0028220240 scopus 로고
    • A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia
    • Warwick, S., Bowen, T., McVeigh, H. P. & Embley, T. M. (1994). A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia. Int J Syst Bacteriol 44, 293-299.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 293-299
    • Warwick, S.1    Bowen, T.2    McVeigh, H.P.3    Embley, T.M.4
  • 39
    • 79958858043 scopus 로고    scopus 로고
    • Pseudonocardia bannaensis sp. nov., a novel actinomycete isolated from the surface-sterilized roots of Artemisia annua L
    • Zhao, G.-Z., Li, J., Zhu, W.-Y., Li, X.-P., Tian, S.-Z., Zhao, L.-X., Xu, L.-H. & Li, W.-J. (2011). Pseudonocardia bannaensis sp. nov., a novel actinomycete isolated from the surface-sterilized roots of Artemisia annua L. Antonie van Leeuwenhoek 100, 35-42.
    • (2011) Antonie van Leeuwenhoek , vol.100 , pp. 35-42
    • Zhao, G.-Z.1    Li, J.2    Zhu, W.-Y.3    Li, X.-P.4    Tian, S.-Z.5    Zhao, L.-X.6    Xu, L.-H.7    Li, W.-J.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.