메뉴 건너뛰기




Volumn 140, Issue 4-6, 2012, Pages 105-114

Human influence on the population decline and loss of genetic diversity in a small and isolated population of Sichuan snub-nosed monkeys (Rhinopithecus roxellana)

Author keywords

Bottleneck; Genetic diversity; Human activities; Microsatellite; Rhinopithecus roxellana

Indexed keywords

ANIMAL; ARTICLE; CHINA; COLOBINAE; GENE LOCUS; GENETIC VARIABILITY; GENETICS; HUMAN; HUMAN ACTIVITIES; POPULATION DENSITY; POPULATION DYNAMICS;

EID: 84866540846     PISSN: 00166707     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10709-012-9662-9     Document Type: Article
Times cited : (40)

References (58)
  • 1
    • 58949083369 scopus 로고    scopus 로고
    • Two-step multiplex polymerase chain reaction improves the speed and accuracy of genotyping using DNA from noninvasive and museum samples
    • Arandjelovic M, Guschanski K, Schubert G et al (2009) Two-step multiplex polymerase chain reaction improves the speed and accuracy of genotyping using DNA from noninvasive and museum samples. Mol Ecol Resour 9: 28-36.
    • (2009) Mol Ecol Resour , vol.9 , pp. 28-36
    • Arandjelovic, M.1    Guschanski, K.2    Schubert, G.3
  • 2
    • 33845941859 scopus 로고    scopus 로고
    • Genetix 4. 05, logiciel sous Windows TM pour la génétique des populations
    • Université de Montpellier II, Montpellier, France
    • Belkhir K, Borsa P, Chikhi L, et al (1996-2004) Genetix 4. 05, logiciel sous Windows TM pour la génétique des populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5171, Université de Montpellier II, Montpellier, France.
    • (1996) Laboratoire Génome, Populations, Interactions, CNRS UMR 5171
    • Belkhir, K.1    Borsa, P.2    Chikhi, L.3
  • 3
    • 84974285013 scopus 로고
    • Proboscis monkeys and their swamp forests in Sarawak
    • Bennett EL (1988) Proboscis monkeys and their swamp forests in Sarawak. Oryx 22: 69-74.
    • (1988) Oryx , vol.22 , pp. 69-74
    • Bennett, E.L.1
  • 4
    • 0034024908 scopus 로고    scopus 로고
    • Does inbreeding affect the extinction risk of small populations?: predictions from Drosophila
    • Bijlsma R, Bundgaard J, Boerema AC (2000) Does inbreeding affect the extinction risk of small populations?: predictions from Drosophila. J Evol Biol 13: 502-514.
    • (2000) J Evol Biol , vol.13 , pp. 502-514
    • Bijlsma, R.1    Bundgaard, J.2    Boerema, A.C.3
  • 5
    • 0028978878 scopus 로고
    • Extinction rates in archipelagos: implications for populations in fragmented habitats
    • Burkey TV (1995) Extinction rates in archipelagos: implications for populations in fragmented habitats. Conserv Biol 9: 527-541.
    • (1995) Conserv Biol , vol.9 , pp. 527-541
    • Burkey, T.V.1
  • 6
    • 84858704182 scopus 로고    scopus 로고
    • Noninvasive genetic assessment of the population trend and sex ratio of the Shennongjia population of Sichuan snub-nosed monkeys (Rhinopithecus roxellana)
    • Chang ZF, Liu ZJ, Yang JY, Li M, Vigilant L (2012) Noninvasive genetic assessment of the population trend and sex ratio of the Shennongjia population of Sichuan snub-nosed monkeys (Rhinopithecus roxellana). Chin Sci Bull 57: 1135-1141.
    • (2012) Chin Sci Bull , vol.57 , pp. 1135-1141
    • Chang, Z.F.1    Liu, Z.J.2    Yang, J.Y.3    Li, M.4    Vigilant, L.5
  • 7
    • 0033596109 scopus 로고    scopus 로고
    • Genetic divergence and units for conservation in the Komodo dragon Varanus komodoensis
    • Ciofi C, Beaumont MA, Swingland IR et al (1999) Genetic divergence and units for conservation in the Komodo dragon Varanus komodoensis. Proc R Soc B-Biol Sci 266: 2269-2274.
    • (1999) Proc R Soc B-Biol Sci , vol.266 , pp. 2269-2274
    • Ciofi, C.1    Beaumont, M.A.2    Swingland, I.R.3
  • 8
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet JM, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 9
    • 77953067304 scopus 로고    scopus 로고
    • SMOGD: software for the measurement of genetic diversity
    • Crawford NG (2009) SMOGD: software for the measurement of genetic diversity. Mol Ecol Resour 10: 556-557.
    • (2009) Mol Ecol Resour , vol.10 , pp. 556-557
    • Crawford, N.G.1
  • 10
    • 0028325745 scopus 로고
    • Mutational processes of simple-sequence repeat loci in human populations
    • Di Rienzo A, Peterson AC, Garza JC et al (1994) Mutational processes of simple-sequence repeat loci in human populations. Proc Natl Acad Sci USA 91: 3166-3170.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 3166-3170
    • Di Rienzo, A.1    Peterson, A.C.2    Garza, J.C.3
  • 11
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
    • Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
    • (2005) Mol Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 12
    • 0030436959 scopus 로고    scopus 로고
    • Relationship of genetic variation to population size in wildlife
    • Frankham R (1996) Relationship of genetic variation to population size in wildlife. Conserv Biol 10: 1500-1508.
    • (1996) Conserv Biol , vol.10 , pp. 1500-1508
    • Frankham, R.1
  • 14
    • 0002281255 scopus 로고    scopus 로고
    • How large must populations be to retain evolutionary potential
    • Franklin IR, Frankham R (1998) How large must populations be to retain evolutionary potential. Anim Conserv 1: 69-70.
    • (1998) Anim Conserv , vol.1 , pp. 69-70
    • Franklin, I.R.1    Frankham, R.2
  • 15
    • 33244487793 scopus 로고    scopus 로고
    • Genetic signature of anthropogenic population collapse in Orang-utans
    • Goossens B, Chikhi L, Ancrenaz M et al (2006) Genetic signature of anthropogenic population collapse in Orang-utans. PLoS Biol 4: 285-291.
    • (2006) PLoS Biol , vol.4 , pp. 285-291
    • Goossens, B.1    Chikhi, L.2    Ancrenaz, M.3
  • 17
    • 79959635235 scopus 로고    scopus 로고
    • Genetic structuring and recent demographic history of red pandas (Ailurus fulgens) inferred from microsatellite and mitochondrial DNA
    • Hu YB, Guo Y, Qi DW et al (2011) Genetic structuring and recent demographic history of red pandas (Ailurus fulgens) inferred from microsatellite and mitochondrial DNA. Mol Ecol 20: 2662-2675.
    • (2011) Mol Ecol , vol.20 , pp. 2662-2675
    • Hu, Y.B.1    Guo, Y.2    Qi, D.W.3
  • 18
    • 12444270749 scopus 로고
    • Dental agenesis as evidence of possible genetic isolation in the Colobine monkey, Rhinopithecus roxellana
    • Jablonski NG (1992) Dental agenesis as evidence of possible genetic isolation in the Colobine monkey, Rhinopithecus roxellana. Primates 33: 371-376.
    • (1992) Primates , vol.33 , pp. 371-376
    • Jablonski, N.G.1
  • 19
    • 0031748617 scopus 로고    scopus 로고
    • The response of Catarrhine primates to Pleistocene environmental fluctuations in east Asia
    • Jablonski NG (1998) The response of Catarrhine primates to Pleistocene environmental fluctuations in east Asia. Primates 39: 29-37.
    • (1998) Primates , vol.39 , pp. 29-37
    • Jablonski, N.G.1
  • 21
    • 38349075375 scopus 로고    scopus 로고
    • The genetic implications of habitat fragmentation for animals
    • Keyghobadi N (2007) The genetic implications of habitat fragmentation for animals. Can J Zool 85: 1049-1064.
    • (2007) Can J Zool , vol.85 , pp. 1049-1064
    • Keyghobadi, N.1
  • 22
    • 0030050477 scopus 로고    scopus 로고
    • The role of genetic variation in adaptation and population persistence in a changing environment
    • Lande R, Shannon S (1996) The role of genetic variation in adaptation and population persistence in a changing environment. Evolution 50: 434-437.
    • (1996) Evolution , vol.50 , pp. 434-437
    • Lande, R.1    Shannon, S.2
  • 23
    • 80052086014 scopus 로고    scopus 로고
    • High gene flow across large geographic scales reduces extinction risk for a highly specialised coral feeding butterflyfish
    • Lawton RJ, Messmer V, Pratchett MS et al (2011) High gene flow across large geographic scales reduces extinction risk for a highly specialised coral feeding butterflyfish. Mol Ecol 20: 3584-3598.
    • (2011) Mol Ecol , vol.20 , pp. 3584-3598
    • Lawton, R.J.1    Messmer, V.2    Pratchett, M.S.3
  • 24
    • 0035024533 scopus 로고    scopus 로고
    • Molecular phylogenetic relationships among Sichuan snub-nosed monkeys (Rhinopithecus roxellanae) inferred from mitochondrial cytochrome-b gene sequences
    • Li M, Liang B, Feng ZJ et al (2001) Molecular phylogenetic relationships among Sichuan snub-nosed monkeys (Rhinopithecus roxellanae) inferred from mitochondrial cytochrome-b gene sequences. Primates 42: 153-160.
    • (2001) Primates , vol.42 , pp. 153-160
    • Li, M.1    Liang, B.2    Feng, Z.J.3
  • 25
    • 0036909548 scopus 로고    scopus 로고
    • Extinction of snub-nosed monkeys in China during the past 400 years
    • Li BG, Pan RL, Oxnard CE (2002) Extinction of snub-nosed monkeys in China during the past 400 years. Int J Primatol 23: 1127-1244.
    • (2002) Int J Primatol , vol.23 , pp. 1127-1244
    • Li, B.G.1    Pan, R.L.2    Oxnard, C.E.3
  • 26
    • 0037854449 scopus 로고    scopus 로고
    • Genetic diversity and population history of golden monkeys (Rhinopithecus roxellana)
    • Li HP, Meng SJ, Men ZM et al (2003) Genetic diversity and population history of golden monkeys (Rhinopithecus roxellana). Genetics 164: 269-275.
    • (2003) Genetics , vol.164 , pp. 269-275
    • Li, H.P.1    Meng, S.J.2    Men, Z.M.3
  • 27
    • 35648970108 scopus 로고    scopus 로고
    • Phylogeography and population structure of the golden monkeys (Rhinopithecus roxellana): inferred from mitochondrial DNA sequences
    • Li M, Liu ZJ, Gou JX et al (2007a) Phylogeography and population structure of the golden monkeys (Rhinopithecus roxellana): inferred from mitochondrial DNA sequences. Am J Primatol 69: 1195-1209.
    • (2007) Am J Primatol , vol.69 , pp. 1195-1209
    • Li, M.1    Liu, Z.J.2    Gou, J.X.3
  • 28
    • 33847689391 scopus 로고    scopus 로고
    • Dramatic decline of François' langur Trachypithecus francoisi in Guangxi Province, China
    • Li YB, Huang CM, Ding P, Tang Z, Wood C (2007b) Dramatic decline of François' langur Trachypithecus francoisi in Guangxi Province, China. Oryx 41: 38-43.
    • (2007) Oryx , vol.41 , pp. 38-43
    • Li, Y.B.1    Huang, C.M.2    Ding, P.3    Tang, Z.4    Wood, C.5
  • 29
    • 70349110836 scopus 로고    scopus 로고
    • The effect of landscape features on population genetic structure in Yunnan snub-nosed monkeys (Rhinopithecus bieti) implies an anthropogenic genetic discontinuity
    • Liu ZJ, Ren BP, Wu RD et al (2009) The effect of landscape features on population genetic structure in Yunnan snub-nosed monkeys (Rhinopithecus bieti) implies an anthropogenic genetic discontinuity. Mol Ecol 18: 3831-3846.
    • (2009) Mol Ecol , vol.18 , pp. 3831-3846
    • Liu, Z.J.1    Ren, B.P.2    Wu, R.D.3
  • 30
    • 1342290091 scopus 로고    scopus 로고
    • Evidence of genetic distinction and long-term population decline in wolves (Canis lupus) in the Italian Apennines
    • Lucchini V, Galov A, Randi E (2004) Evidence of genetic distinction and long-term population decline in wolves (Canis lupus) in the Italian Apennines. Mol Ecol 13: 523-536.
    • (2004) Mol Ecol , vol.13 , pp. 523-536
    • Lucchini, V.1    Galov, A.2    Randi, E.3
  • 31
    • 84855976270 scopus 로고    scopus 로고
    • Historical geographic dispersal of the golden snub-nosed monkey (Rhinopithecus roxellana) and the influence of climatic oscillations
    • Luo MF, Liu ZJ, Pan HJ et al (2012) Historical geographic dispersal of the golden snub-nosed monkey (Rhinopithecus roxellana) and the influence of climatic oscillations. Am J Primatol 74: 91-101.
    • (2012) Am J Primatol , vol.74 , pp. 91-101
    • Luo, M.F.1    Liu, Z.J.2    Pan, H.J.3
  • 32
    • 0001921823 scopus 로고    scopus 로고
    • The critical effective size for a genetically secure population
    • Lynch M, Lande R (1998) The critical effective size for a genetically secure population. Anim Conserv 1: 70-72.
    • (1998) Anim Conserv , vol.1 , pp. 70-72
    • Lynch, M.1    Lande, R.2
  • 33
    • 0033523906 scopus 로고    scopus 로고
    • Conservation biology: restoration of an inbred adder population
    • Madsen T, Shine R, Olsson M et al (1999) Conservation biology: restoration of an inbred adder population. Nature 402: 34-35.
    • (1999) Nature , vol.402 , pp. 34-35
    • Madsen, T.1    Shine, R.2    Olsson, M.3
  • 34
    • 33846520723 scopus 로고    scopus 로고
    • Population fragmentation leads to spatial and temporal genetic structure in the endangered Spanish imperial eagle
    • Martinez-Cruz B, Godoy JA, Negro JJ (2007) Population fragmentation leads to spatial and temporal genetic structure in the endangered Spanish imperial eagle. Mol Ecol 16: 477-486.
    • (2007) Mol Ecol , vol.16 , pp. 477-486
    • Martinez-Cruz, B.1    Godoy, J.A.2    Negro, J.J.3
  • 35
    • 0037390005 scopus 로고    scopus 로고
    • The history of effective population size and genetic diversity in the Yellowstone grizzly (Ursus arctos): implications for conservation
    • Miller CR, Waits LP (2003) The history of effective population size and genetic diversity in the Yellowstone grizzly (Ursus arctos): implications for conservation. Proc Natl Acad Sci USA 100: 4334-4339.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 4334-4339
    • Miller, C.R.1    Waits, L.P.2
  • 36
    • 79954549368 scopus 로고    scopus 로고
    • Genetic diversity and distinctiveness of the proboscis monkeys (Nasalis larvatus) of the Klias peninsula, Sabah, Malaysia
    • Munshi-South J, Bernard H (2011) Genetic diversity and distinctiveness of the proboscis monkeys (Nasalis larvatus) of the Klias peninsula, Sabah, Malaysia. J Hered 102: 342-346.
    • (2011) J Hered , vol.102 , pp. 342-346
    • Munshi-South, J.1    Bernard, H.2
  • 37
    • 3042741356 scopus 로고    scopus 로고
    • Factors affecting the amount of genomic DNA extracted from ape feces and the identification of an improved sample storage method
    • Nsubuga AM, Robbins MM, Roeder AD et al (2004) Factors affecting the amount of genomic DNA extracted from ape feces and the identification of an improved sample storage method. Mol Ecol 13: 2089-2094.
    • (2004) Mol Ecol , vol.13 , pp. 2089-2094
    • Nsubuga, A.M.1    Robbins, M.M.2    Roeder, A.D.3
  • 38
    • 62549104151 scopus 로고    scopus 로고
    • A high polymorphism level in Rhinopithecus roxellana
    • Pan D, Hu HX, Meng SJ et al (2009) A high polymorphism level in Rhinopithecus roxellana. Int J Primatol 30: 337-351.
    • (2009) Int J Primatol , vol.30 , pp. 337-351
    • Pan, D.1    Hu, H.X.2    Meng, S.J.3
  • 40
    • 0032880393 scopus 로고    scopus 로고
    • BOTTLENECK: a computer program for detecting recent reductions in effective population size from allele frequency data
    • Piry S, Luikart G, Cornuet JM (1999) BOTTLENECK: a computer program for detecting recent reductions in effective population size from allele frequency data. J Hered 90: 502-503.
    • (1999) J Hered , vol.90 , pp. 502-503
    • Piry, S.1    Luikart, G.2    Cornuet, J.M.3
  • 41
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 43
    • 0002220619 scopus 로고    scopus 로고
    • Experimental tests of minimum viable population size
    • Reed DH, Bryant EH (2000) Experimental tests of minimum viable population size. Anim Conserv 3: 7-14.
    • (2000) Anim Conserv , vol.3 , pp. 7-14
    • Reed, D.H.1    Bryant, E.H.2
  • 44
    • 0036245438 scopus 로고    scopus 로고
    • Genealogical trees, coalescent theory and the analysis of genetic polymorphism
    • Rosenberg NA, Nordborg M (2002) Genealogical trees, coalescent theory and the analysis of genetic polymorphism. Nat Rev Genet 3: 380-390.
    • (2002) Nat Rev Genet , vol.3 , pp. 380-390
    • Rosenberg, N.A.1    Nordborg, M.2
  • 45
    • 36849080837 scopus 로고    scopus 로고
    • GENEPOP'007: a complete re-implementation of the GENEPOP software for Windows and Linux
    • Rousset F (2008) GENEPOP'007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol Ecol Resour 8: 103-106.
    • (2008) Mol Ecol Resour , vol.8 , pp. 103-106
    • Rousset, F.1
  • 46
    • 0032473978 scopus 로고    scopus 로고
    • Inbreeding and extinction in a butterfly metapopulation
    • Saccheri I, Kuussaari M, Kankare M et al (1998) Inbreeding and extinction in a butterfly metapopulation. Nature 392: 491-494.
    • (1998) Nature , vol.392 , pp. 491-494
    • Saccheri, I.1    Kuussaari, M.2    Kankare, M.3
  • 48
    • 0036006020 scopus 로고    scopus 로고
    • Testing for genetic evidence of population expansion and contraction: an empirical analysis of microsatellite DNA variation using a hierarchical Bayesian method
    • Storz JF, Beaumont MA (2002) Testing for genetic evidence of population expansion and contraction: an empirical analysis of microsatellite DNA variation using a hierarchical Bayesian method. Evolution 56: 154-166.
    • (2002) Evolution , vol.56 , pp. 154-166
    • Storz, J.F.1    Beaumont, M.A.2
  • 49
    • 78049508061 scopus 로고    scopus 로고
    • Identification and characterization of microsatellite markers via cross-species amplification from François' langur (Trachypithecus francoisi)
    • Sun T, Wang BS, Liu ZJ et al (2010) Identification and characterization of microsatellite markers via cross-species amplification from François' langur (Trachypithecus francoisi). Acta Theriologica Sinica 30: 351-353.
    • (2010) Acta Theriologica Sinica , vol.30 , pp. 351-353
    • Sun, T.1    Wang, B.S.2    Liu, Z.J.3
  • 50
    • 38949178372 scopus 로고    scopus 로고
    • ONeSAMP: a program to estimate effective population size using approximate Bayesian computation
    • Tallmon DA, Koyuk A, Luikart GH et al (2008) ONeSAMP: a program to estimate effective population size using approximate Bayesian computation. Mol Ecol Resour 8: 299-301.
    • (2008) Mol Ecol Resour , vol.8 , pp. 299-301
    • Tallmon, D.A.1    Koyuk, A.2    Luikart, G.H.3
  • 51
    • 4344606590 scopus 로고    scopus 로고
    • MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data
    • van Oosterhout C, Hutchinson WF, Wills DPM (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.
    • (2004) Mol Ecol Notes , vol.4 , pp. 535-538
    • van Oosterhout, C.1    Hutchinson, W.F.2    Wills, D.P.M.3
  • 52
    • 47249162403 scopus 로고    scopus 로고
    • LDNE: a program for estimating effective population size from data on linkage disequilibrium
    • Waples RS, Do C (2008) LDNE: a program for estimating effective population size from data on linkage disequilibrium. Mol Ecol Resour 8: 753-756.
    • (2008) Mol Ecol Resour , vol.8 , pp. 753-756
    • Waples, R.S.1    Do, C.2
  • 53
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 56
    • 34547794162 scopus 로고    scopus 로고
    • Genetic viability and population history of the Giant panda, putting an end to the "evolutionary dead end"?
    • Zhang BW, Li M, Zhang ZJ et al (2007) Genetic viability and population history of the Giant panda, putting an end to the "evolutionary dead end"? Mol Biol Evol 24: 1801-1810.
    • (2007) Mol Biol Evol , vol.24 , pp. 1801-1810
    • Zhang, B.W.1    Li, M.2    Zhang, Z.J.3
  • 57
    • 84866541882 scopus 로고    scopus 로고
    • Ecological research of golden monkeys (Rhinopithecus roxellana) in Shennongjia Nature Reserve
    • (in Chinese)
    • Zhu ZQ (2003) Ecological research of golden monkeys (Rhinopithecus roxellana) in Shennongjia Nature Reserve. Hubei For Sci Tech Z1: 46-52 (in Chinese).
    • (2003) Hubei For Sci Tech , vol.Z1 , pp. 46-52
    • Zhu, Z.Q.1
  • 58
    • 77955508806 scopus 로고    scopus 로고
    • Conservation implications of drastic reductions in the smallest and most isolated populations of giant pandas
    • Zhu LF, Zhan XJ, Wu H et al (2010) Conservation implications of drastic reductions in the smallest and most isolated populations of giant pandas. Conserv Biol 24: 1299-1306.
    • (2010) Conserv Biol , vol.24 , pp. 1299-1306
    • Zhu, L.F.1    Zhan, X.J.2    Wu, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.