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Volumn 7, Issue 9, 2012, Pages

Preliminary Insights into the Phylogeography of Six Aquatic Hyphomycete Species

Author keywords

[No Author keywords available]

Indexed keywords

INTERNAL TRANSCRIBED SPACER; ORGANIC MATTER;

EID: 84866521647     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0045289     Document Type: Article
Times cited : (25)

References (54)
  • 2
    • 4043087606 scopus 로고    scopus 로고
    • The ubiquity of small species: patterns of local and global diversity
    • Fenchel T, Finlay BJ, (2004) The ubiquity of small species: patterns of local and global diversity. BioScience 54: 777-784.
    • (2004) BioScience , vol.54 , pp. 777-784
    • Fenchel, T.1    Finlay, B.J.2
  • 3
    • 1942528013 scopus 로고    scopus 로고
    • Cosmopolitan metapopulations of free-living microbial eukaryotes
    • Finlay BJ, Fenchel T, (2004) Cosmopolitan metapopulations of free-living microbial eukaryotes. Protist 155: 237-244.
    • (2004) Protist , vol.155 , pp. 237-244
    • Finlay, B.J.1    Fenchel, T.2
  • 4
    • 84928641621 scopus 로고    scopus 로고
    • Here and there or everywhere
    • LaChance MA, (2004) Here and there or everywhere? BioScience 54: 884.
    • (2004) BioScience , vol.54 , pp. 884
    • LaChance, M.A.1
  • 5
    • 33751213586 scopus 로고    scopus 로고
    • Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi
    • Taylor JW, Turner E, Townsend JP, Dettman JR, Jacobson D, (2006) Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi. Phil Trans R Soc B 361: 1947-1963.
    • (2006) Phil Trans R Soc B , vol.361 , pp. 1947-1963
    • Taylor, J.W.1    Turner, E.2    Townsend, J.P.3    Dettman, J.R.4    Jacobson, D.5
  • 7
    • 77951623078 scopus 로고    scopus 로고
    • Multilocus sequence data reveal extensive phylogenetic species diversity within the Neurospora discreta complex
    • Dettman JR, Jacobson DJ, Taylor JW, (2006) Multilocus sequence data reveal extensive phylogenetic species diversity within the Neurospora discreta complex. Mycologia 98: 436-446.
    • (2006) Mycologia , vol.98 , pp. 436-446
    • Dettman, J.R.1    Jacobson, D.J.2    Taylor, J.W.3
  • 8
    • 0000744978 scopus 로고
    • The genus Lentinula (Tricholomataceae tribe Collybieae)
    • Pegler DN, (1983) The genus Lentinula (Tricholomataceae tribe Collybieae). Sydowia 36: 227-239.
    • (1983) Sydowia , vol.36 , pp. 227-239
    • Pegler, D.N.1
  • 9
    • 0034964598 scopus 로고    scopus 로고
    • Shiitake mushrooms and molecular clocks: historical biogeography of Lentinula
    • Hibbett DS, (2001) Shiitake mushrooms and molecular clocks: historical biogeography of Lentinula. J Biogeogr 28: 231-241.
    • (2001) J Biogeogr , vol.28 , pp. 231-241
    • Hibbett, D.S.1
  • 10
    • 33646252467 scopus 로고    scopus 로고
    • Low genetic variation and no detectable population structure in Aspergillus fumigatus compared to closely related Neosartorya species
    • Rydholm C, Szakacs G, Lutzoni F, (2006) Low genetic variation and no detectable population structure in Aspergillus fumigatus compared to closely related Neosartorya species. Eukaryot Cell 5: 650-657.
    • (2006) Eukaryot Cell , vol.5 , pp. 650-657
    • Rydholm, C.1    Szakacs, G.2    Lutzoni, F.3
  • 15
    • 27744476675 scopus 로고    scopus 로고
    • Molecular evidence confirms multiple origins of aquatic hyphomycetes
    • Belliveau MJR, Bärlocher F, (2005) Molecular evidence confirms multiple origins of aquatic hyphomycetes. Mycol Res 109: 1407-1417.
    • (2005) Mycol Res , vol.109 , pp. 1407-1417
    • Belliveau, M.J.R.1    Bärlocher, F.2
  • 16
    • 0002858274 scopus 로고
    • Anamorph-teleomorph relationships
    • In: Bärlocher F, editor, Springer-Verlag, Berlin
    • Webster J (1992) Anamorph-teleomorph relationships. In: Bärlocher F, editor. The Ecology of Aquatic Hyphomycetes. Springer-Verlag, Berlin.
    • (1992) The Ecology of Aquatic Hyphomycetes
    • Webster, J.1
  • 18
    • 25444532733 scopus 로고
    • Aquatic hyphomycetes from hawaii
    • Ranzoni FV, (1979) Aquatic hyphomycetes from hawaii. Mycologia 71: 786-795.
    • (1979) Mycologia , vol.71 , pp. 786-795
    • Ranzoni, F.V.1
  • 19
    • 0038304779 scopus 로고    scopus 로고
    • Phylogeny of Tetracladium based on 18S rDNA Czech Mycol
    • Nikolcheva LG, Bärlocher F, (2002) Phylogeny of Tetracladium based on 18S rDNA Czech Mycol. 53: 285-295.
    • (2002) , vol.53 , pp. 285-295
    • Nikolcheva, L.G.1    Bärlocher, F.2
  • 20
    • 33750708891 scopus 로고    scopus 로고
    • Phylogeny of selected aquatic hyphomycetes based on morphological and molecular data
    • Baschien C, Marvanová L, Szewzyk U, (2006) Phylogeny of selected aquatic hyphomycetes based on morphological and molecular data. Nova Hedwigia 83: 311-352.
    • (2006) Nova Hedwigia , vol.83 , pp. 311-352
    • Baschien, C.1    Marvanová, L.2    Szewzyk, U.3
  • 22
    • 79251571633 scopus 로고    scopus 로고
    • DNA barcoding of fungi: a case study using ITS sequences for identifying aquatic hyphomycete species
    • Seena S, Pascoal C, Marvanová L, Cássio F, (2010) DNA barcoding of fungi: a case study using ITS sequences for identifying aquatic hyphomycete species. Fungal Divers 44: 77-87.
    • (2010) Fungal Divers , vol.44 , pp. 77-87
    • Seena, S.1    Pascoal, C.2    Marvanová, L.3    Cássio, F.4
  • 23
    • 84860490772 scopus 로고    scopus 로고
    • Intraspecific variation of the aquatic fungus Articulospora tetracladia: an ubiquitous perspective
    • Seena S, Duarte S, Pascoal C, Cássio F, (2012) Intraspecific variation of the aquatic fungus Articulospora tetracladia: an ubiquitous perspective. PloS ONE 7: e35884.
    • (2012) PloS ONE , vol.7
    • Seena, S.1    Duarte, S.2    Pascoal, C.3    Cássio, F.4
  • 24
    • 79251581285 scopus 로고    scopus 로고
    • Population genetics of the aquatic fungus Tetracladium marchalianum over space and time
    • Anderson JL, Shearer CA, (2011) Population genetics of the aquatic fungus Tetracladium marchalianum over space and time. PLoS ONE 6: e15908.
    • (2011) PLoS ONE , vol.6
    • Anderson, J.L.1    Shearer, C.A.2
  • 25
    • 33846551800 scopus 로고    scopus 로고
    • Molecular taxonomy, origins and evolution of freshwater Ascomycetes
    • Vijaykrishna D, Jeewon R, Hyde KD, (2006) Molecular taxonomy, origins and evolution of freshwater Ascomycetes. Fungal Divers 23: 351-390.
    • (2006) Fungal Divers , vol.23 , pp. 351-390
    • Vijaykrishna, D.1    Jeewon, R.2    Hyde, K.D.3
  • 26
    • 77954886296 scopus 로고    scopus 로고
    • Molecular approaches promise a deeper and broader understanding of the evolutionary ecology of aquatic hyphomycetes
    • Bärlocher F, (2010) Molecular approaches promise a deeper and broader understanding of the evolutionary ecology of aquatic hyphomycetes. J N Am Benthol Soc 29: 1027-1041.
    • (2010) J N Am Benthol Soc , vol.29 , pp. 1027-1041
    • Bärlocher, F.1
  • 27
    • 84875005165 scopus 로고    scopus 로고
    • Analysing aquatic fungal communities in Australia: impacts of sample incubation and geographic distance of streams
    • Bärlocher F, Stewart M, Ryder DS, (2011) Analysing aquatic fungal communities in Australia: impacts of sample incubation and geographic distance of streams. Czech Mycol 63: 113-132.
    • (2011) Czech Mycol , vol.63 , pp. 113-132
    • Bärlocher, F.1    Stewart, M.2    Ryder, D.S.3
  • 28
    • 84872205107 scopus 로고    scopus 로고
    • In: Assessment of Species Diversity in the Atlantic Maritime Ecozone. Ottawa: NRC Research Press. Canadian Science Publishing, ISBN 978-0-660-19835-4
    • Bärlocher F, Marvanová L (2010) Aquatic hyphomycetes (Deuteromycotina) of the Atlantic Maritime Ecozone. In: Assessment of Species Diversity in the Atlantic Maritime Ecozone. Ottawa: NRC Research Press. Canadian Science Publishing, ISBN 978-0-660-19835-4, 36 pp.
    • (2010) Aquatic hyphomycetes (Deuteromycotina) of the Atlantic Maritime Ecozone , pp. 36
    • Bärlocher, F.1    Marvanová, L.2
  • 29
    • 25844437503 scopus 로고    scopus 로고
    • Aquatic hyphomycete diversity in streams of Northwest Portugal
    • Pascoal C, Marvanová L, Cássio F, (2005) Aquatic hyphomycete diversity in streams of Northwest Portugal. Fungal Divers 19: 109-128.
    • (2005) Fungal Divers , vol.19 , pp. 109-128
    • Pascoal, C.1    Marvanová, L.2    Cássio, F.3
  • 31
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ, (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 32
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide-sequences
    • Kimura M, (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide-sequences. J Mol Evol 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 33
    • 0023375195 scopus 로고
    • The neighbor-joining method - a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M, (1987) The neighbor-joining method- a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 34
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 35
    • 0000461280 scopus 로고
    • Confidence-limits on phylogenies - an approach using the bootstrap
    • Felsenstein J, (1985) Confidence-limits on phylogenies- an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 36
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
    • Excoffier L, Lischer HEL, (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10: 564-567.
    • (2010) Mol Ecol Resour , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.L.2
  • 37
    • 0021066244 scopus 로고
    • Evolutionary relationship of DNA-sequences in finite populations
    • Tajima F, (1983) Evolutionary relationship of DNA-sequences in finite populations. Genetics 105: 437-460.
    • (1983) Genetics , vol.105 , pp. 437-460
    • Tajima, F.1
  • 38
    • 0024313579 scopus 로고
    • Statistical-method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F, (1989) Statistical-method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 39
    • 12044253190 scopus 로고
    • An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
    • Hillis DM, Bull JJ, (1993) An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42: 182-192.
    • (1993) Syst Biol , vol.42 , pp. 182-192
    • Hillis, D.M.1    Bull, J.J.2
  • 40
    • 45749142504 scopus 로고    scopus 로고
    • Intraspecific ITS variability in the Kingdom Fungi as expressed in the International Sequence Databases and its implications for molecular species identification
    • Nilsson RH, Kristiansson E, Ryberg M, Hallenberg N, Larsson K-H, (2008) Intraspecific ITS variability in the Kingdom Fungi as expressed in the International Sequence Databases and its implications for molecular species identification. Evol Bioinform 4: 193-201.
    • (2008) Evol Bioinform , vol.4 , pp. 193-201
    • Nilsson, R.H.1    Kristiansson, E.2    Ryberg, M.3    Hallenberg, N.4    Larsson, K.-H.5
  • 41
    • 0033503489 scopus 로고    scopus 로고
    • Infraspecific genetic diversity and substrate preference in the aquatic hyphomycete Tetrachaetum elegans
    • Charcosset J-Y, Gardes M, (1999) Infraspecific genetic diversity and substrate preference in the aquatic hyphomycete Tetrachaetum elegans. Mycol Res 100: 736-742.
    • (1999) Mycol Res , vol.100 , pp. 736-742
    • Charcosset, J.-Y.1    Gardes, M.2
  • 42
    • 2542465220 scopus 로고    scopus 로고
    • Genetic diversity in Tetrachaetum elegans, a mitosporic aquatic fungus
    • Laitung B, Chauvet E, Feau N, Feve K, Chikhi L, et al. (2004) Genetic diversity in Tetrachaetum elegans, a mitosporic aquatic fungus. Mol Ecol 13: 1679-1692.
    • (2004) Mol Ecol , vol.13 , pp. 1679-1692
    • Laitung, B.1    Chauvet, E.2    Feau, N.3    Feve, K.4    Chikhi, L.5
  • 43
    • 64949184725 scopus 로고    scopus 로고
    • Reproduction and dispersal in aquatic hyphomycetes
    • Bärlocher F, (2009) Reproduction and dispersal in aquatic hyphomycetes. Mycoscience 50: 3-8.
    • (2009) Mycoscience , vol.50 , pp. 3-8
    • Bärlocher, F.1
  • 44
    • 33645484504 scopus 로고
    • Hydrocina chaetocladia gen. et sp. nov., the teleomorph of Tricladium chaetocladium
    • Webster J, Scheuer C, Om-Kalthoum Khattab S, (1991) Hydrocina chaetocladia gen. et sp. nov., the teleomorph of Tricladium chaetocladium. Nova Hedwigia 52: 65-72.
    • (1991) Nova Hedwigia , vol.52 , pp. 65-72
    • Webster, J.1    Scheuer, C.2    Om-Kalthoum Khattab, S.3
  • 45
    • 0028975618 scopus 로고
    • Freshwater hyphomycete communities in a canal. 1. Endophytic hyphomycetes of submerged roots of trees sheltering a canal bank
    • Iqbal SH, Bareen F, Yousaf N, (1995) Freshwater hyphomycete communities in a canal. 1. Endophytic hyphomycetes of submerged roots of trees sheltering a canal bank. Can J Bot 73: 538-543.
    • (1995) Can J Bot , vol.73 , pp. 538-543
    • Iqbal, S.H.1    Bareen, F.2    Yousaf, N.3
  • 46
    • 34250665812 scopus 로고    scopus 로고
    • Fungal endophytes in submerged roots
    • In: Schulz B, Boule C, Sieber TN, editors, Berlin & Heidelberg: Springer-Verlag
    • Bärlocher F (2006) Fungal endophytes in submerged roots. In: Schulz B, Boule C, Sieber TN, editors. Microbial root endophytes. Berlin & Heidelberg: Springer-Verlag.
    • (2006) Microbial root endophytes
    • Bärlocher, F.1
  • 48
    • 0026069799 scopus 로고
    • Genetic uniformity in barley and its powdery mildew pathogen
    • Brown JKM, Jessop AC, Rezanoor HN, (1991) Genetic uniformity in barley and its powdery mildew pathogen. Proc R Soc B 246: 83-90.
    • (1991) Proc R Soc B , vol.246 , pp. 83-90
    • Brown, J.K.M.1    Jessop, A.C.2    Rezanoor, H.N.3
  • 49
    • 0038352451 scopus 로고
    • Long distance transport of spores of Puccinia graminis tritici in the southern hemisphere
    • Watson I, De Sousa C, (1983) Long distance transport of spores of Puccinia graminis tritici in the southern hemisphere. Proc Linn Soc NSW 106: 311-321.
    • (1983) Proc Linn Soc NSW , vol.106 , pp. 311-321
    • Watson, I.1    De Sousa, C.2
  • 50
    • 0002594875 scopus 로고
    • In: Bärlocher F, editor. The ecology of aquatic hyphomycetes. Springer-Verlag, Berlin
    • Bärlocher F (1992) Community organization. In: Bärlocher F, editor. The ecology of aquatic hyphomycetes. Springer-Verlag, Berlin.
    • (1992) Community organization
    • Bärlocher, F.1
  • 51
    • 33847136465 scopus 로고    scopus 로고
    • Stress response in two strains of the aquatic hyphomycete Heliscus lugdunensis after exposure to cadmium and copper ions
    • Braha B, Tintenmann H, Krauss G, Ehrman J, Bärlocher F, (2007) Stress response in two strains of the aquatic hyphomycete Heliscus lugdunensis after exposure to cadmium and copper ions. BioMetals 20: 93-105.
    • (2007) BioMetals , vol.20 , pp. 93-105
    • Braha, B.1    Tintenmann, H.2    Krauss, G.3    Ehrman, J.4    Bärlocher, F.5
  • 52
    • 79960335550 scopus 로고    scopus 로고
    • Intraspecific traits change biodiversity effects on ecosystem functioning under metal stress
    • Fernandes I, Pascoal C, Cássio F, (2011) Intraspecific traits change biodiversity effects on ecosystem functioning under metal stress. Oecologia 166: 1019-1028.
    • (2011) Oecologia , vol.166 , pp. 1019-1028
    • Fernandes, I.1    Pascoal, C.2    Cássio, F.3


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