One-component styrene monooxygenases: An evolutionary view on a rare class of flavoproteins

Applied Biochemistry and Biotechnology

Volumn 167, Issue 5, 2012, Pages 931-944

  Tischler, Dirk ^a   Gröning, Janosch A D ^a   Kaschabek, Stefan R ^a   Schlömann, Michael ^a  

^a TU BERGAKADEMIE FREIBERG   (Germany)

Author keywords

Covalent evolution; Enantioselective epoxidation; Flavin monooxygenase; One component styrene monooxygenase; Rhodococcus opacus; Self sufficient fusion protein

Indexed keywords

COVALENT EVOLUTION; ENANTIOSELECTIVE EPOXIDATION; FUSION PROTEINS; MONOOXYGENASES; RHODOCOCCUS OPACUS;

AMINO ACIDS; ENANTIOSELECTIVITY; OLEFINS; PROTEINS; STRAIN; STYRENE;

GENES;

AMINO ACID; STYA1 PROTEIN; STYA2B PROTEIN; UNCLASSIFIED DRUG; UNSPECIFIC MONOOXYGENASE;

BACTERIAL GENOME; CONFERENCE PAPER; CONTROLLED STUDY; GENE SEQUENCE; GENETIC VARIABILITY; GENOMIC FRAGMENT; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PROTEIN ANALYSIS; RHODOCOCCUS; RHODOCOCCUS OPACUS;

AMINO ACID SEQUENCE; BIOCATALYSIS; EVOLUTION, MOLECULAR; FLAVOPROTEINS; GENOMICS; MOLECULAR SEQUENCE DATA; OXYGENASES; POLYMERASE CHAIN REACTION; RHODOCOCCUS; SEQUENCE ALIGNMENT; SUBSTRATE SPECIFICITY;

BACTERIA (MICROORGANISMS); RHODOCOCCUS OPACUS;

EID: 84866422528     PISSN: 02732289     EISSN: 15590291     Source Type: Journal    
DOI: 10.1007/s12010-012-9659-y     Document Type: Conference Paper

References (44)

1. Tischler, D., & Kaschabek, S. R. (2012). In S. N. Singh (Ed.), Microbial degradation of xenobiotics. Environmental Science and Engineering (pp. 67-99). Heidelberg: Springer.
2. Montersino, S., Tischler, D., Gassner, G. T., & van Berkel, W. J. H. (2011). Advanced Synthesis and Catalysis, 353, 2301-2319.
3. van Berkel, W. J. H., Kamerbeek, N. M., & Fraaije, M. W. (2006). Journal of Biotechnology, 124, 670-689.
4. Kantz, A., Chin, F., Nallamothu, N., Nguyen, T., & Gassner, G. T. (2005). Archives of Biochemistry and Biophysics, 442, 102-116.
5. Otto, K., Hofstetter, K., Roethlisberger, M., Witholt, B., & Schmid, A. (2004). Journal of Bacteriology, 186, 5292-5302.
6. Hollmann, F., Lin, P.-C., Witholt, B., & Schmid, A. (2003). Journal of the American Chemical Society, 125, 8209-8217.
7. van Hellemond, E. W., Janssen, D. B., & Fraaije, M. W. (2007). Applied and Environmental Microbiology, 73, 5832-5839.
8. Nikodinovic-Runic, J., Flanagan, M., Hume, A. R., Cagney, G., & O'Connor, K. E. (2009). Microbiology, 155, 3348-3361.
9. Tischler, D., Eulberg, D., Lakner, S., Kaschabek, S. R., van Berkel, W. J. H., & Schlömann, M. (2009). Journal of Bacteriology, 191, 4996-5009.
10. Tischler, D., Kermer, R., Gröning, J. A. D., Kaschabek, S. R., van Berkel, W. J. H., & Schlömann, M. (2010). Journal of Bacteriology, 192, 5220-5227.
11. De Mot, R., & Parret, A. H. A. (2002). Trends in Microbiology, 10, 502-508.
12. Liu, L., Schmid, R. D., & Urlacher, V. B. (2006). Applied Microbiology and Biotechnology, 72, 876-882.
13. Munro, A. W., Girvan, H. M., & McLean, K. J. (2007). Biochimica et Biophysica Acta, 1770, 345-359.
14. Torres Pazmiño, D. E., Winkler, M., Glieder, A., & Fraaije, M. W. (2010). Journal of Biotechnology, 146, 9-24.
15. Kim, B. S., Kim, S. Y., Park, J., Park, W., Hwang, K. Y., Yoon, Y. J., et al. (2007). Journal of Applied Microbiology, 102, 1392-1400.
16. Roberts, G. A., Grogan, G., Greter, A., Flitsch, S. L., & Turner, N. J. (2002). Journal of Bacteriology, 184, 3898-3908.
17. Dorn, E., Hellwig, M., Reineke, W., & Knackmuss, H.-J. (1974). Archives of Microbiology, 99, 61-70.
18. Mitani, Y., Meng, X. Y., Kamagata, Y., & Tamura, T. (2005). Journal of Bacteriology, 187, 2582-2591.
19. Quan, S., & Dabbs, E. R. (1993). Plasmid, 29, 74-79.
20. Lenke, H., Pieper, D. H., Bruhn, C., & Knackmuss, H.-J. (1992). Applied and Environmental Microbiology, 58, 2928-2932.
21. Gorlatov, S.N.,Maltseva, O. V., Shevchenko,V. I.,&Golovleva, L. A. (1989). Microbiology (Mikrobiologiya), 58, 647-651.
22. Dabrock, B., Keßler, M., Averhoff, B., & Gottschalk, G. (1994). Applied and Environmental Microbiology, 60, 853-860.
23. Sensfuss, C., Reh, M., & Schlegel, H. G. (1986). Journal of General Microbiology, 132, 997-1007.
24. Seto, M., Kimbara, K., Shimura, M., Hatta, T., Fukuda, M., & Yano, K. (1995). Applied and Environmental Microbiology, 61, 3353-3358.
25. Mongodin, E. F., Shapir, N., Daugherty, S. C., DeBoy, R. T., Emerson, J. B., Shvartzbeyn, A., et al. (2006). PLoS Genetics, 2, e214.
26. Sambrook, J., Fritsch, E., & Maniatis, T. (2001). Molecular cloning: a laboratory manual (3rd ed.). Cold Spring Harbor: Cold Spring Harbor Laboratory Press.
27. Gröning, J. A. D., Tischler, D., Kaschabek, S. R., & Schlömann, M. (2010). Journal of Basic Microbiology, 50, 499-502.
28. Wei, M., Deng, J., Feng, K., Yu, B., & Chen, Y. (2010). Analytical Chemistry, 82, 6303-6307.
29. Moiseeva, O. V., Solyanikova, I. P., Kaschabek, S. R., Gröning, J., Thiel, M., Golovleva, L. A., et al. (2002). Journal of Bacteriology, 184, 5282-5292.
30. Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., et al. (1997). Nucleic Acids Research, 25, 3389-3402.
31. Altschul, S. F., Gish,W., Miller,W.,Myers, E.W., & Lipman, D. J. (1990). Journal ofMolecular Biology, 215, 403-410.
32. Staden, R. (1996). Molecular Biotechnology, 5, 233-241.
33. Higgins, D. G., & Sharp, P. M. (1988). Gene, 73, 237-244.
34. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., & Higgins, D. G. (1997). Nucleic Acids Research, 25, 4876-4882.
35. Felsenstein, J. (2005). PHYLIP (Phylogeny Inference Package) version 3.6. Distributed by the author. Seattle: Department of Genome Sciences, University of Washington.
36. Ishikawa, J., Yamashita, A., Mikami, Y., Hoshino, Y., Kurita, H., Hotta, K., et al. (2004). Proceedings of the National Academy of Sciences of the United States of America, 101, 14925-14930.
37. Tan, G., Gao, Y., Shi, M., Zhang, X., He, S., Chen, Z., et al. (2005). Nucleic Acids Research, 33, e122.
38. Velasco, A., Alonso, S., Garcia, J. L., Perera, J.,& Diaz, E. (1998). Journal of Bacteriology, 180, 1063-1071.
39. König, C., Eulberg, D., Gröning, J., Lakner, S., Seibert, V., Kaschabek, S. R., et al. (2004). Microbiology, 150, 3075-3087.
40. Bestetti, G., Galli, E., Ruzzi, M., Baldacci, G., Zennaro, E., & Frontali, L. (1984). Plasmid, 12, 181-188.
41. Toda, H., & Itoh, N. (2012). Journal of Bioscience and Bioengineering, 113, 12-19.
42. Bundy, B. M., Campbell, A. L., & Neidle, E. L. (1998). Journal of Bacteriology, 180, 4466-4474.
43. Eulberg, D., Kourbatova, E. M., Golovleva, L. A., & Schlömann, M. (1998). Journal of Bacteriology, 180, 1082-1094.
44. Solyanikova, I. P., Maltseva, O. V., Volmer, M. D., Golovleva, L. A., & Schlömann, M. (1995). Journal of Bacteriology, 177, 2821-2826.