메뉴 건너뛰기




Volumn 13, Issue 1, 2012, Pages

Genomic and proteomic characterization of SuMu, a Mu-like bacteriophage infecting Haemophilus parasuis

Author keywords

Bacteriophage; Haemophilus parasuis; Virulence

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; CYTOSINE; GUANINE;

EID: 84866381688     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-331     Document Type: Article
Times cited : (19)

References (51)
  • 2
    • 0001878148 scopus 로고    scopus 로고
    • Haemophilus parasuis: immunity in swine after vaccination
    • Rapp-Gabrielson VJ, Kocur GJ, Clark JT, Muir SK. Haemophilus parasuis: immunity in swine after vaccination. Vet Med 1997, 92(1):83-90.
    • (1997) Vet Med , vol.92 , Issue.1 , pp. 83-90
    • Rapp-Gabrielson, V.J.1    Kocur, G.J.2    Clark, J.T.3    Muir, S.K.4
  • 3
    • 0033112782 scopus 로고    scopus 로고
    • Agents of the "suis-ide diseases" of swine: Actinobacillussuis, Haemophilusparasuis, and Streptococcussuis
    • 1189524, 10369563
    • MacInnes JI, Desrosiers R. Agents of the "suis-ide diseases" of swine: Actinobacillussuis, Haemophilusparasuis, and Streptococcussuis. Can J Vet Res 1999, 63(2):83-89. 1189524, 10369563.
    • (1999) Can J Vet Res , vol.63 , Issue.2 , pp. 83-89
    • MacInnes, J.I.1    Desrosiers, R.2
  • 4
    • 84866366440 scopus 로고    scopus 로고
    • Swine 2006
    • United States Department of Agriculture, Animal and Plant Health Inspection Service, Veterinary Services, Centers for Epidemiology and Animal Health, National Animal Health Monitoring System, Fort Collins, CO
    • Swine 2006. Part II; Reference of Swine Health and Health Management Practices in the United States, 2006 2007, 79. United States Department of Agriculture, Animal and Plant Health Inspection Service, Veterinary Services, Centers for Epidemiology and Animal Health, National Animal Health Monitoring System, Fort Collins, CO.
    • (2007) Part II; Reference of Swine Health and Health Management Practices in the United States, 2006 , pp. 79
  • 5
    • 0026558212 scopus 로고
    • Designation of 15 serovars of Haemophilusparasuis on the basis of immunodiffusion using heat-stable antigen extracts
    • Kielstein P, Rapp-Gabrielson VJ. Designation of 15 serovars of Haemophilusparasuis on the basis of immunodiffusion using heat-stable antigen extracts. J ClinMicrobiol 1992, 30(4):862-865.
    • (1992) J ClinMicrobiol , vol.30 , Issue.4 , pp. 862-865
    • Kielstein, P.1    Rapp-Gabrielson, V.J.2
  • 6
    • 0037672828 scopus 로고    scopus 로고
    • Characterization of the diversity of Haemophilusparasuis field isolates by use of serotyping and genotyping
    • 10.2460/ajvr.2003.64.435, 12693533
    • Oliveira S, Blackall PJ, Pijoan C. Characterization of the diversity of Haemophilusparasuis field isolates by use of serotyping and genotyping. Am J Vet Res 2003, 64(4):435-442. 10.2460/ajvr.2003.64.435, 12693533.
    • (2003) Am J Vet Res , vol.64 , Issue.4 , pp. 435-442
    • Oliveira, S.1    Blackall, P.J.2    Pijoan, C.3
  • 7
    • 34249002108 scopus 로고    scopus 로고
    • Evolution of microbial virulence: the benefits of stress
    • 10.1016/j.tig.2007.03.017, 17434232
    • Arnold DL, Jackson RW, Waterfield NR, Mansfield JW. Evolution of microbial virulence: the benefits of stress. Trends Genet 2007, 23(6):293-300. 10.1016/j.tig.2007.03.017, 17434232.
    • (2007) Trends Genet , vol.23 , Issue.6 , pp. 293-300
    • Arnold, D.L.1    Jackson, R.W.2    Waterfield, N.R.3    Mansfield, J.W.4
  • 8
    • 0842266354 scopus 로고    scopus 로고
    • Are viruses driving microbial diversification and diversity?
    • Weinbauer MG, Rassoulzadegan F. Are viruses driving microbial diversification and diversity?. Environ Microbiol 2004, 6(1):1-11.
    • (2004) Environ Microbiol , vol.6 , Issue.1 , pp. 1-11
    • Weinbauer, M.G.1    Rassoulzadegan, F.2
  • 9
    • 2942520975 scopus 로고    scopus 로고
    • Phage-host interaction: an ecological perspective
    • 10.1128/JB.186.12.3677-3686.2004, 419959, 15175280
    • Chibani-Chennoufi S, Bruttin A, Dillmann M-L, Brüssow H. Phage-host interaction: an ecological perspective. J Bacteriol 2004, 186(12):3677-3686. 10.1128/JB.186.12.3677-3686.2004, 419959, 15175280.
    • (2004) J Bacteriol , vol.186 , Issue.12 , pp. 3677-3686
    • Chibani-Chennoufi, S.1    Bruttin, A.2    Dillmann, M.-L.3    Brüssow, H.4
  • 10
    • 0036299014 scopus 로고    scopus 로고
    • Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, NeisseriaandDeinococcus
    • Morgan GJ, Hatfull GF, Casjens S, Hendrix RW. Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, NeisseriaandDeinococcus. J MolBiol 2002, 317(3):337-359.
    • (2002) J MolBiol , vol.317 , Issue.3 , pp. 337-359
    • Morgan, G.J.1    Hatfull, G.F.2    Casjens, S.3    Hendrix, R.W.4
  • 11
    • 79957750873 scopus 로고    scopus 로고
    • Detection of a bacteriophage gene encoding a Mu-like portal protein in Haemophilusparasuis reference strains and field isolates by nested polymerase chain reaction
    • Zehr ES, Tabatabai LB. Detection of a bacteriophage gene encoding a Mu-like portal protein in Haemophilusparasuis reference strains and field isolates by nested polymerase chain reaction. JVetDiagn Invest 2011, 23(3):538-542.
    • (2011) JVetDiagn Invest , vol.23 , Issue.3 , pp. 538-542
    • Zehr, E.S.1    Tabatabai, L.B.2
  • 15
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • 10.1093/nar/25.17.3389, 146917, 9254694
    • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25(17):3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
    • (1997) Nucleic Acids Res , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 17
    • 0035082976 scopus 로고    scopus 로고
    • Mu-like prophage in serogroup BNeisseria meningitidis coding for surface-exposed antigens
    • 10.1128/IAI.69.4.2580-2588.2001, 98194, 11254622
    • Masignani V, Giuliani MM, Tettelin H, Comanducci M, Rappuoli R, Scarlato V. Mu-like prophage in serogroup BNeisseria meningitidis coding for surface-exposed antigens. Infect Immun 2001, 69(4):2580-2588. 10.1128/IAI.69.4.2580-2588.2001, 98194, 11254622.
    • (2001) Infect Immun , vol.69 , Issue.4 , pp. 2580-2588
    • Masignani, V.1    Giuliani, M.M.2    Tettelin, H.3    Comanducci, M.4    Rappuoli, R.5    Scarlato, V.6
  • 18
    • 0021848276 scopus 로고
    • Morphogenetic structures present in lysates of amber mutants of bacteriophage Mu
    • 10.1016/0042-6822(85)90388-5, 3904174
    • Grundy FJ, Howe MM. Morphogenetic structures present in lysates of amber mutants of bacteriophage Mu. Virology 1985, 143(2):485-504. 10.1016/0042-6822(85)90388-5, 3904174.
    • (1985) Virology , vol.143 , Issue.2 , pp. 485-504
    • Grundy, F.J.1    Howe, M.M.2
  • 22
    • 25444504092 scopus 로고    scopus 로고
    • Microarray analysis ofHaemophilusparasuis gene expression underinvitrogrowth conditions mimicking the in vivo environment
    • Melnikow E, Dornan S, Sargent C, Duszenko M, Evans G, Gunkel N, Selzer PM, Ullrich HJ. Microarray analysis ofHaemophilusparasuis gene expression underinvitrogrowth conditions mimicking the in vivo environment. Vet Microbiol 2005, 110(3-4):255-263.
    • (2005) Vet Microbiol , vol.110 , Issue.3-4 , pp. 255-263
    • Melnikow, E.1    Dornan, S.2    Sargent, C.3    Duszenko, M.4    Evans, G.5    Gunkel, N.6    Selzer, P.M.7    Ullrich, H.J.8
  • 23
    • 84857719531 scopus 로고    scopus 로고
    • Detection of a putative hemolysin operon, hhdBA, ofHaemophilusparasuis from pigs with Glässer disease
    • Assavacheep P, Assavacheep A, Turni C. Detection of a putative hemolysin operon, hhdBA, ofHaemophilusparasuis from pigs with Glässer disease. JVetDiagn Invest 2012, 24(2):339-343.
    • (2012) JVetDiagn Invest , vol.24 , Issue.2 , pp. 339-343
    • Assavacheep, P.1    Assavacheep, A.2    Turni, C.3
  • 24
    • 64649086792 scopus 로고    scopus 로고
    • Identification of novel potential virulence-associated factors inHaemophilus parasuis
    • Sack M, Baltes N. Identification of novel potential virulence-associated factors inHaemophilus parasuis. Vet Microbiol 2009, 136(3-4):382-386.
    • (2009) Vet Microbiol , vol.136 , Issue.3-4 , pp. 382-386
    • Sack, M.1    Baltes, N.2
  • 25
    • 0030277461 scopus 로고    scopus 로고
    • Cloning of a unique sequence specific to isolates of type B:2Pasteurellamultocida
    • 10.1016/S0034-5288(96)90063-6, 8938847
    • Townsend KM, Dawkins HJS, Zeng BJ, Watson MW, Papadimitriou JM. Cloning of a unique sequence specific to isolates of type B:2Pasteurellamultocida. Res Vet Sci 1996, 61(3):199-205. 10.1016/S0034-5288(96)90063-6, 8938847.
    • (1996) Res Vet Sci , vol.61 , Issue.3 , pp. 199-205
    • Townsend, K.M.1    Dawkins, H.J.S.2    Zeng, B.J.3    Watson, M.W.4    Papadimitriou, J.M.5
  • 26
    • 0037422561 scopus 로고    scopus 로고
    • Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenicEscherichia colistrain
    • Dozois CM, Daigle F, Curtiss R. Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenicEscherichia colistrain. ProcNatlAcadSci U S A 2003, 100(1):247-252.
    • (2003) ProcNatlAcadSci U S A , vol.100 , Issue.1 , pp. 247-252
    • Dozois, C.M.1    Daigle, F.2    Curtiss, R.3
  • 27
    • 0032583626 scopus 로고    scopus 로고
    • Development of a PCR test based on a gene region associated with the pathogenicity ofPasteurellamultocidaserotype B:2, the causal agent of haemorrhagic septicaemia in Asia
    • 10.1016/S0378-1135(97)00199-5, 9556860
    • Brickell S, Thomas L, Long K, Panaccio M, Widders P. Development of a PCR test based on a gene region associated with the pathogenicity ofPasteurellamultocidaserotype B:2, the causal agent of haemorrhagic septicaemia in Asia. Vet Microbiol 1998, 59(4):295-307. 10.1016/S0378-1135(97)00199-5, 9556860.
    • (1998) Vet Microbiol , vol.59 , Issue.4 , pp. 295-307
    • Brickell, S.1    Thomas, L.2    Long, K.3    Panaccio, M.4    Widders, P.5
  • 28
    • 0032964297 scopus 로고    scopus 로고
    • Blast 2 sequences - a new tool for comparing protein and nucleotide sequences
    • Tatusova TA, Madden TL. Blast 2 sequences - a new tool for comparing protein and nucleotide sequences. FEMS MicrobiolLett 1999, 174(2):247-250.
    • (1999) FEMS MicrobiolLett , vol.174 , Issue.2 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 29
    • 36048986337 scopus 로고    scopus 로고
    • Update on the diagnosis ofHaemophilusparasuisinfection in pigs and novel genotyping methods
    • 10.1016/j.tvjl.2006.10.017, 17175186
    • Olvera A, Segalés J, Aragón V. Update on the diagnosis ofHaemophilusparasuisinfection in pigs and novel genotyping methods. Vet J 2007, 174(3):522-529. 10.1016/j.tvjl.2006.10.017, 17175186.
    • (2007) Vet J , vol.174 , Issue.3 , pp. 522-529
    • Olvera, A.1    Segalés, J.2    Aragón, V.3
  • 32
    • 49149101876 scopus 로고    scopus 로고
    • Diversity among the tailed-bacteriophages that infect the Enterobacteriaceae
    • Casjens SR. Diversity among the tailed-bacteriophages that infect the Enterobacteriaceae. Res in Microbiol 2008, 159(5):340-348.
    • (2008) Res in Microbiol , vol.159 , Issue.5 , pp. 340-348
    • Casjens, S.R.1
  • 33
    • 38849186955 scopus 로고    scopus 로고
    • Genomic characterization of mycobacteriophage Giles: evidence for phage acquisition of host DNA by illegitimate recombination
    • 10.1128/JB.01657-07, 2258872, 18178732
    • Morris P, Marinelli LJ, Jacobs-Sera D, Hendrix RW, Hatfull GF. Genomic characterization of mycobacteriophage Giles: evidence for phage acquisition of host DNA by illegitimate recombination. J Bacteriol 2008, 190(6):2172-2182. 10.1128/JB.01657-07, 2258872, 18178732.
    • (2008) J Bacteriol , vol.190 , Issue.6 , pp. 2172-2182
    • Morris, P.1    Marinelli, L.J.2    Jacobs-Sera, D.3    Hendrix, R.W.4    Hatfull, G.F.5
  • 35
    • 0036070576 scopus 로고    scopus 로고
    • Bacteriophage control of bacterial virulence
    • 10.1128/IAI.70.8.3985-3993.2002, 128183, 12117903
    • Wagner PL, Waldor MK. Bacteriophage control of bacterial virulence. Infect Immun 2002, 70(8):3985-3993. 10.1128/IAI.70.8.3985-3993.2002, 128183, 12117903.
    • (2002) Infect Immun , vol.70 , Issue.8 , pp. 3985-3993
    • Wagner, P.L.1    Waldor, M.K.2
  • 36
    • 33748691996 scopus 로고    scopus 로고
    • Isolation and characterization of the P5 adhesin protein of Haemophilusparasuis serotype 5
    • McVicker JK, Tabatabai LB. Isolation and characterization of the P5 adhesin protein of Haemophilusparasuis serotype 5. Prep BiochemBiotechnol 2006, 36(4):363-374.
    • (2006) Prep BiochemBiotechnol , vol.36 , Issue.4 , pp. 363-374
    • McVicker, J.K.1    Tabatabai, L.B.2
  • 37
    • 0036952246 scopus 로고    scopus 로고
    • Bacteriophage HP2 of Haemophilusinfluenzae
    • 10.1128/JB.184.24.6893-6905.2002, 135456, 12446640
    • Williams BJ, Golomb M, Phillips T, Brownlee J, Olson MV, Smith AL. Bacteriophage HP2 of Haemophilusinfluenzae. J Bacteriol 2002, 184(24):6893-6905. 10.1128/JB.184.24.6893-6905.2002, 135456, 12446640.
    • (2002) J Bacteriol , vol.184 , Issue.24 , pp. 6893-6905
    • Williams, B.J.1    Golomb, M.2    Phillips, T.3    Brownlee, J.4    Olson, M.V.5    Smith, A.L.6
  • 39
    • 0017681196 scopus 로고
    • DNA sequencing with chain-terminating inhibitors
    • Sanger F, Nicklen S, Coulson AR. DNA sequencing with chain-terminating inhibitors. ProcNatlAcadSci U S A 1977, 74(12):5463-5467.
    • (1977) ProcNatlAcadSci U S A , vol.74 , Issue.12 , pp. 5463-5467
    • Sanger, F.1    Nicklen, S.2    Coulson, A.R.3
  • 41
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids SympSer 1999, 41:95-98.
    • (1999) Nucleic Acids SympSer , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 42
    • 3242891684 scopus 로고    scopus 로고
    • DIALIGN: multiple DNA and protein sequence alignment at BiBiServ
    • 441511, 15215344, Web Server issue
    • Morgenstern B. DIALIGN: multiple DNA and protein sequence alignment at BiBiServ. NAR 2004, 32(Web Server issue):W33-W36. 441511, 15215344.
    • (2004) NAR , vol.32
    • Morgenstern, B.1
  • 43
    • 0037563355 scopus 로고    scopus 로고
    • Very alkaline immobilized pH gradients for two-dimensional electrophoresis of ribosomal and nuclear proteins
    • Görg A, Obermaier C, Boguth G, Csordas A, Diaz JJ, Madjar JJ. Very alkaline immobilized pH gradients for two-dimensional electrophoresis of ribosomal and nuclear proteins. Electrophoresis 1997, 18(3-4):328-337.
    • (1997) Electrophoresis , vol.18 , Issue.3-4 , pp. 328-337
    • Görg, A.1    Obermaier, C.2    Boguth, G.3    Csordas, A.4    Diaz, J.J.5    Madjar, J.J.6
  • 44
    • 0034095972 scopus 로고    scopus 로고
    • The current state of two-dimensional electrophoresis with immobilized pH gradients
    • 10.1002/(SICI)1522-2683(20000401)21:6<1037::AID-ELPS1037>3.0.CO;2-V, 10786879
    • Görg A, Obermaier C, Boguth G, Harder A, Scheibe B, Wildgruber R, Weiss W. The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 2000, 21(6):1037-1053. 10.1002/(SICI)1522-2683(20000401)21:6<1037::AID-ELPS1037>3.0.CO;2-V, 10786879.
    • (2000) Electrophoresis , vol.21 , Issue.6 , pp. 1037-1053
    • Görg, A.1    Obermaier, C.2    Boguth, G.3    Harder, A.4    Scheibe, B.5    Wildgruber, R.6    Weiss, W.7
  • 45
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • 10.1038/227680a0, 5432063
    • Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227(5259):680-685. 10.1038/227680a0, 5432063.
    • (1970) Nature , vol.227 , Issue.5259 , pp. 680-685
    • Laemmli, U.K.1
  • 46
    • 0034630358 scopus 로고    scopus 로고
    • Two-dimensional electrophoresis of membrane proteins using immobilized pH gradients
    • 10.1006/abio.2000.4514, 10805514
    • Molloy MP. Two-dimensional electrophoresis of membrane proteins using immobilized pH gradients. Anal Biochem 2000, 280(1):1-10. 10.1006/abio.2000.4514, 10805514.
    • (2000) Anal Biochem , vol.280 , Issue.1 , pp. 1-10
    • Molloy, M.P.1
  • 47
    • 0033565832 scopus 로고    scopus 로고
    • Role of accurate mass measurement (+/- 10 ppm) in protein identification strategies employing MS or MS/MS and database searching
    • 10.1021/ac9810516, 10424174
    • Clauser KR, Baker P, Burlingame AL. Role of accurate mass measurement (+/- 10 ppm) in protein identification strategies employing MS or MS/MS and database searching. Anal Chem 1999, 71(14):2871-2882. 10.1021/ac9810516, 10424174.
    • (1999) Anal Chem , vol.71 , Issue.14 , pp. 2871-2882
    • Clauser, K.R.1    Baker, P.2    Burlingame, A.L.3
  • 48
    • 0036702419 scopus 로고    scopus 로고
    • Identification of modified proteins by mass spectrometry
    • 10.1080/15216540214314, 12440519
    • Sickman A, Mreyen M, Meyer HE. Identification of modified proteins by mass spectrometry. IUBMB Life 2002, 54:51-57. 10.1080/15216540214314, 12440519.
    • (2002) IUBMB Life , vol.54 , pp. 51-57
    • Sickman, A.1    Mreyen, M.2    Meyer, H.E.3
  • 51
    • 67650484732 scopus 로고    scopus 로고
    • PRIDE converter: making proteomics data-sharing easy
    • 10.1038/nbt0709-598, 19587657
    • Barsnes H, Vizcaíno JA, Eidhammer I, Martens L. PRIDE converter: making proteomics data-sharing easy. Nat Biotechnol 2009, 27(7):598-599. 10.1038/nbt0709-598, 19587657.
    • (2009) Nat Biotechnol , vol.27 , Issue.7 , pp. 598-599
    • Barsnes, H.1    Vizcaíno, J.A.2    Eidhammer, I.3    Martens, L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.