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Volumn 7, Issue 9, 2012, Pages

Global Genome Analysis of the Downstream Binding Targets of Testis Determining Factor SRY and SOX9

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; BIOINFORMATICS; CELL DIFFERENTIATION; CHROMATIN IMMUNOPRECIPITATION; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; DNA BINDING MOTIF; DNA RESPONSIVE ELEMENT; DNA SEQUENCE; EMBRYO; GENE; GENE CONTROL; GENE FUNCTION; GENE IDENTIFICATION; GENE INTERACTION; GENE REGULATORY NETWORK; GENE TARGETING; GENETIC ASSOCIATION; GENOME ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; RAT; SERTOLI CELL; SEX DETERMINATION PROCESS; SOX9 GENE; SRY GENE; TESTIS DEVELOPMENT; UNINDEXED SEQUENCE;

EID: 84866336130     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0043380     Document Type: Article
Times cited : (54)

References (51)
  • 1
    • 0014935137 scopus 로고
    • Philosophical Transactions of the Royal Society of London, Series B
    • Jost A, Price D, Edwards G, (1970) Philosophical Transactions of the Royal Society of London, Series B. Biological Sciences 259: 119-131.
    • (1970) Biological Sciences , vol.259 , pp. 119-131
    • Jost, A.1    Price, D.2    Edwards, G.3
  • 2
    • 0001664017 scopus 로고
    • Recherches sur la différentiation sexuelle de lembryonde de lapin
    • Jost A, (1947) Recherches sur la différentiation sexuelle de lembryonde de lapin. Arch Anat Microsc Morph Exp 36: 271-315.
    • (1947) Arch Anat Microsc Morph Exp , vol.36 , pp. 271-315
    • Jost, A.1
  • 3
    • 0000009634 scopus 로고
    • Problems of fetal endocrinology: the gonadal and hypophyseal hormones
    • Jost A, (1953) Problems of fetal endocrinology: the gonadal and hypophyseal hormones. Recent Prog Horm Res 8: 379-418.
    • (1953) Recent Prog Horm Res , vol.8 , pp. 379-418
    • Jost, A.1
  • 4
    • 0016718126 scopus 로고
    • Possible role for H-Y antigen in the primary determination of sex
    • Wachtel SS, Ono S, Koo GC, Boyse EA, (1975) Possible role for H-Y antigen in the primary determination of sex. Nature 257: 235-236.
    • (1975) Nature , vol.257 , pp. 235-236
    • Wachtel, S.S.1    Ono, S.2    Koo, G.C.3    Boyse, E.A.4
  • 5
    • 0018652619 scopus 로고
    • Testis-organizing H-Y antigen and the primary sex-determining mechanism of mammals
    • Ohno S, Nagai Y, Ciccarese S, Iwata H, (1979) Testis-organizing H-Y antigen and the primary sex-determining mechanism of mammals. Recent Prog Horm Res 35: 449-476.
    • (1979) Recent Prog Horm Res , vol.35 , pp. 449-476
    • Ohno, S.1    Nagai, Y.2    Ciccarese, S.3    Iwata, H.4
  • 6
    • 0023263601 scopus 로고
    • Exchange of terminal portions of X- and Y-chromosomal short arms in human XX males
    • Page DC, Brown LG, de la Chapelle A, (1987) Exchange of terminal portions of X- and Y-chromosomal short arms in human XX males. Nature 328: 437-440.
    • (1987) Nature , vol.328 , pp. 437-440
    • Page, D.C.1    Brown, L.G.2    de la Chapelle, A.3
  • 7
    • 0023663890 scopus 로고
    • The sex-determining region of the human Y chromosome encodes a finger protein
    • Page DC, Mosher R, Simpson EM, Fisher EM, Mardon G, et al. (1987) The sex-determining region of the human Y chromosome encodes a finger protein. Cell 51: 1091-1104.
    • (1987) Cell , vol.51 , pp. 1091-1104
    • Page, D.C.1    Mosher, R.2    Simpson, E.M.3    Fisher, E.M.4    Mardon, G.5
  • 8
    • 0025328296 scopus 로고
    • A gene mapping to the sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes
    • Gubbay J, Collignon J, Koopman P, Capel B, Economou A, et al. (1990) A gene mapping to the sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes. Nature 346: 245-250.
    • (1990) Nature , vol.346 , pp. 245-250
    • Gubbay, J.1    Collignon, J.2    Koopman, P.3    Capel, B.4    Economou, A.5
  • 9
    • 0025364886 scopus 로고
    • A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif
    • Sinclair AH, Berta P, Palmer MS, Hawkins JR, Griffiths BL, et al. (1990) A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif. Nature 346: 240-244.
    • (1990) Nature , vol.346 , pp. 240-244
    • Sinclair, A.H.1    Berta, P.2    Palmer, M.S.3    Hawkins, J.R.4    Griffiths, B.L.5
  • 11
    • 4644299516 scopus 로고    scopus 로고
    • SOX9 is up-regulated by the transient expression of SRY specifically in Sertoli cell precursors
    • Sekido R, Bar I, Narvaez V, Penny G, Lovell-Badge R, (2004) SOX9 is up-regulated by the transient expression of SRY specifically in Sertoli cell precursors. Dev Biol 274: 271-279.
    • (2004) Dev Biol , vol.274 , pp. 271-279
    • Sekido, R.1    Bar, I.2    Narvaez, V.3    Penny, G.4    Lovell-Badge, R.5
  • 12
    • 0029742909 scopus 로고    scopus 로고
    • Sox9 expression during gonadal development implies a conserved role for the gene in testis differentiation in mammals and birds
    • Morais da Silva S, Hacker A, Harley V, Goodfellow P, Swain A, et al. (1996) Sox9 expression during gonadal development implies a conserved role for the gene in testis differentiation in mammals and birds. Nat Genet 14: 62-68.
    • (1996) Nat Genet , vol.14 , pp. 62-68
    • Morais da Silva, S.1    Hacker, A.2    Harley, V.3    Goodfellow, P.4    Swain, A.5
  • 13
    • 0032705186 scopus 로고    scopus 로고
    • Targeted mutagenesis of the endogenous mouse Mis gene promoter: in vivo definition of genetic pathways of vertebrate sexual development
    • Arango NA, Lovell-Badge R, Behringer RR, (1999) Targeted mutagenesis of the endogenous mouse Mis gene promoter: in vivo definition of genetic pathways of vertebrate sexual development. Cell 99: 409-419.
    • (1999) Cell , vol.99 , pp. 409-419
    • Arango, N.A.1    Lovell-Badge, R.2    Behringer, R.R.3
  • 14
    • 0031796252 scopus 로고    scopus 로고
    • Direct interaction of SRY-related protein SOX9 and steroidogenic factor 1 regulates transcription of the human anti-Mullerian hormone gene
    • De Santa Barbara P, Bonneaud N, Boizet B, Desclozeaux M, Moniot B, et al. (1998) Direct interaction of SRY-related protein SOX9 and steroidogenic factor 1 regulates transcription of the human anti-Mullerian hormone gene. Mol Cell Biol 18: 6653-6665.
    • (1998) Mol Cell Biol , vol.18 , pp. 6653-6665
    • de Santa Barbara, P.1    Bonneaud, N.2    Boizet, B.3    Desclozeaux, M.4    Moniot, B.5
  • 15
    • 36748999377 scopus 로고    scopus 로고
    • Fibroblast growth factor receptor 2 regulates proliferation and Sertoli differentiation during male sex determination
    • Kim Y, Bingham N, Sekido R, Parker KL, Lovell-Badge R, et al. (2007) Fibroblast growth factor receptor 2 regulates proliferation and Sertoli differentiation during male sex determination. Proc Natl Acad Sci U S A 104: 16558-16563.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 16558-16563
    • Kim, Y.1    Bingham, N.2    Sekido, R.3    Parker, K.L.4    Lovell-Badge, R.5
  • 16
    • 33748313401 scopus 로고    scopus 로고
    • Balancing the bipotential gonad between alternative organ fates: a new perspective on an old problem
    • Kim Y, Capel B, (2006) Balancing the bipotential gonad between alternative organ fates: a new perspective on an old problem. Dev Dyn 235: 2292-2300.
    • (2006) Dev Dyn , vol.235 , pp. 2292-2300
    • Kim, Y.1    Capel, B.2
  • 17
    • 34249854973 scopus 로고    scopus 로고
    • SOX9 regulates prostaglandin D synthase gene transcription in vivo to ensure testis development
    • Wilhelm D, Hiramatsu R, Mizusaki H, Widjaja L, Combes AN, et al. (2007) SOX9 regulates prostaglandin D synthase gene transcription in vivo to ensure testis development. J Biol Chem 282: 10553-10560.
    • (2007) J Biol Chem , vol.282 , pp. 10553-10560
    • Wilhelm, D.1    Hiramatsu, R.2    Mizusaki, H.3    Widjaja, L.4    Combes, A.N.5
  • 18
    • 4444294105 scopus 로고    scopus 로고
    • Fgf9 induces proliferation and nuclear localization of FGFR2 in Sertoli precursors during male sex determination
    • Schmahl J, Kim Y, Colvin JS, Ornitz DM, Capel B, (2004) Fgf9 induces proliferation and nuclear localization of FGFR2 in Sertoli precursors during male sex determination. Development 131: 3627-3636.
    • (2004) Development , vol.131 , pp. 3627-3636
    • Schmahl, J.1    Kim, Y.2    Colvin, J.S.3    Ornitz, D.M.4    Capel, B.5
  • 19
    • 78649823499 scopus 로고    scopus 로고
    • Sry: the master switch in mammalian sex determination
    • Kashimada K, Koopman P, (2010) Sry: the master switch in mammalian sex determination. Development 137: 3921-3930.
    • (2010) Development , vol.137 , pp. 3921-3930
    • Kashimada, K.1    Koopman, P.2
  • 20
    • 69949167079 scopus 로고    scopus 로고
    • Complementary pathways in mammalian female sex determination
    • Nef S, Vassalli JD, (2009) Complementary pathways in mammalian female sex determination. J Biol 8: 74.
    • (2009) J Biol , vol.8 , pp. 74
    • Nef, S.1    Vassalli, J.D.2
  • 21
    • 58149333236 scopus 로고    scopus 로고
    • Sex determination and SRY: down to a wink and a nudge
    • Sekido R, Lovell-Badge R, (2009) Sex determination and SRY: down to a wink and a nudge? Trends Genet 25: 19-29.
    • (2009) Trends Genet , vol.25 , pp. 19-29
    • Sekido, R.1    Lovell-Badge, R.2
  • 22
    • 33846829951 scopus 로고    scopus 로고
    • Sex determination and gonadal development in mammals
    • Wilhelm D, Palmer S, Koopman P, (2007) Sex determination and gonadal development in mammals. Physiol Rev 87: 1-28.
    • (2007) Physiol Rev , vol.87 , pp. 1-28
    • Wilhelm, D.1    Palmer, S.2    Koopman, P.3
  • 23
    • 38049014941 scopus 로고    scopus 로고
    • SRY and the standoff in sex determination
    • DiNapoli L, Capel B, (2008) SRY and the standoff in sex determination. Mol Endocrinol 22: 1-9.
    • (2008) Mol Endocrinol , vol.22 , pp. 1-9
    • DiNapoli, L.1    Capel, B.2
  • 24
    • 45149093155 scopus 로고    scopus 로고
    • Sex determination involves synergistic action of SRY and SF1 on a specific Sox9 enhancer
    • Sekido R, Lovell-Badge R, (2008) Sex determination involves synergistic action of SRY and SF1 on a specific Sox9 enhancer. Nature 453: 930-934.
    • (2008) Nature , vol.453 , pp. 930-934
    • Sekido, R.1    Lovell-Badge, R.2
  • 26
    • 80052538265 scopus 로고    scopus 로고
    • Sry Directly Regulates the Neurotrophin-3 Promoter During Male Sex Determination and Testis Development in Rats
    • Clement TM, Bhandari RK, Sadler-Riggleman I, Skinner MK, (2011) Sry Directly Regulates the Neurotrophin-3 Promoter During Male Sex Determination and Testis Development in Rats. Biology of Reproduction 85: 227-284.
    • (2011) Biology of Reproduction , vol.85 , pp. 227-284
    • Clement, T.M.1    Bhandari, R.K.2    Sadler-Riggleman, I.3    Skinner, M.K.4
  • 27
    • 79956107276 scopus 로고    scopus 로고
    • Basic Helix-Loop-Helix Transcription Factor TCF21 is a Downstream Target of the Male Sex Determining Gene SRY
    • MK S
    • Bhandari RK, Sadler-Riggleman I, Clement TM, MK S, (2011) Basic Helix-Loop-Helix Transcription Factor TCF21 is a Downstream Target of the Male Sex Determining Gene SRY. PLoS ONE 6: e19935.
    • (2011) PLoS ONE , vol.6
    • Bhandari, R.K.1    Sadler-Riggleman, I.2    Clement, T.M.3
  • 28
    • 4544227743 scopus 로고    scopus 로고
    • Disrupted gonadogenesis and male-to-female sex reversal in Pod1 knockout mice
    • Cui S, Ross A, Stallings N, Parker KL, Capel B, et al. (2004) Disrupted gonadogenesis and male-to-female sex reversal in Pod1 knockout mice. Development 131: 4095-4105.
    • (2004) Development , vol.131 , pp. 4095-4105
    • Cui, S.1    Ross, A.2    Stallings, N.3    Parker, K.L.4    Capel, B.5
  • 29
    • 0037837127 scopus 로고    scopus 로고
    • Chemotactic role of neurotropin 3 in the embryonic testis that facilitates male sex determination
    • Cupp AS, Uzumcu M, Skinner MK, (2003) Chemotactic role of neurotropin 3 in the embryonic testis that facilitates male sex determination. Biol Reprod 68: 2033-2037.
    • (2003) Biol Reprod , vol.68 , pp. 2033-2037
    • Cupp, A.S.1    Uzumcu, M.2    Skinner, M.K.3
  • 30
    • 30344475256 scopus 로고    scopus 로고
    • Homozygous inactivation of Sox9 causes complete XY sex reversal in mice
    • Barrionuevo F, Bagheri-Fam S, Klattig J, Kist R, Taketo MM, et al. (2006) Homozygous inactivation of Sox9 causes complete XY sex reversal in mice. Biol Reprod 74: 195-201.
    • (2006) Biol Reprod , vol.74 , pp. 195-201
    • Barrionuevo, F.1    Bagheri-Fam, S.2    Klattig, J.3    Kist, R.4    Taketo, M.M.5
  • 32
    • 77958534051 scopus 로고    scopus 로고
    • Epigenetic transgenerational actions of vinclozolin on promoter regions of the sperm epigenome
    • Guerrero-Bosagna C, Settles M, Lucker BJ, Skinner MK, (2010) Epigenetic transgenerational actions of vinclozolin on promoter regions of the sperm epigenome. PLoS ONE 5: e13100.
    • (2010) PLoS ONE , vol.5
    • Guerrero-Bosagna, C.1    Settles, M.2    Lucker, B.J.3    Skinner, M.K.4
  • 33
    • 12344329357 scopus 로고    scopus 로고
    • Profiling gene expression during the differentiation and development of the murine embryonic gonad
    • Small CL, Shima JE, Uzumcu M, Skinner MK, Griswold MD, (2005) Profiling gene expression during the differentiation and development of the murine embryonic gonad. Biol Reprod 72: 492-501.
    • (2005) Biol Reprod , vol.72 , pp. 492-501
    • Small, C.L.1    Shima, J.E.2    Uzumcu, M.3    Skinner, M.K.4    Griswold, M.D.5
  • 34
    • 34548572920 scopus 로고    scopus 로고
    • Regulation of the gonadal transcriptome during sex determination and testis morphogenesis: comparative candidate genes
    • Clement TM, Anway MD, Uzumcu M, Skinner MK, (2007) Regulation of the gonadal transcriptome during sex determination and testis morphogenesis: comparative candidate genes. Reproduction 134: 455-472.
    • (2007) Reproduction , vol.134 , pp. 455-472
    • Clement, T.M.1    Anway, M.D.2    Uzumcu, M.3    Skinner, M.K.4
  • 35
    • 0027466437 scopus 로고
    • A regulatory cascade hypothesis for mammalian sex determination: SRY represses a negative regulator of male development
    • McElreavey K, Vilain E, Abbas N, Herskowitz I, Fellous M, (1993) A regulatory cascade hypothesis for mammalian sex determination: SRY represses a negative regulator of male development. Proc Natl Acad Sci U S A 90: 3368-3372.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 3368-3372
    • McElreavey, K.1    Vilain, E.2    Abbas, N.3    Herskowitz, I.4    Fellous, M.5
  • 37
    • 0037022227 scopus 로고    scopus 로고
    • A direct role of SRY and SOX proteins in pre-mRNA splicing
    • Ohe K, Lalli E, Sassone-Corsi P, (2002) A direct role of SRY and SOX proteins in pre-mRNA splicing. Proc Natl Acad Sci U S A 99: 1146-1151.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 1146-1151
    • Ohe, K.1    Lalli, E.2    Sassone-Corsi, P.3
  • 38
    • 33644667202 scopus 로고    scopus 로고
    • NHERF2/SIP-1 interacts with mouse SRY via a different mechanism than human SRY
    • Thevenet L, Albrecht KH, Malki S, Berta P, Boizet-Bonhoure B, et al. (2005) NHERF2/SIP-1 interacts with mouse SRY via a different mechanism than human SRY. J Biol Chem 280: 38625-38630.
    • (2005) J Biol Chem , vol.280 , pp. 38625-38630
    • Thevenet, L.1    Albrecht, K.H.2    Malki, S.3    Berta, P.4    Boizet-Bonhoure, B.5
  • 39
    • 80053896420 scopus 로고    scopus 로고
    • Antagonistic regulation of Cyp26b1 by transcription factors SOX9/SF1 and FOXL2 during gonadal development in mice
    • Kashimada K, Svingen T, Feng CW, Pelosi E, Bagheri-Fam S, et al. (2011) Antagonistic regulation of Cyp26b1 by transcription factors SOX9/SF1 and FOXL2 during gonadal development in mice. FASEB J 25: 3561-3569.
    • (2011) FASEB J , vol.25 , pp. 3561-3569
    • Kashimada, K.1    Svingen, T.2    Feng, C.W.3    Pelosi, E.4    Bagheri-Fam, S.5
  • 40
    • 77956578811 scopus 로고    scopus 로고
    • FGF9 suppresses meiosis and promotes male germ cell fate in mice
    • Bowles J, Feng CW, Spiller C, Davidson TL, Jackson A, et al. (2010) FGF9 suppresses meiosis and promotes male germ cell fate in mice. Dev Cell 19: 440-449.
    • (2010) Dev Cell , vol.19 , pp. 440-449
    • Bowles, J.1    Feng, C.W.2    Spiller, C.3    Davidson, T.L.4    Jackson, A.5
  • 42
    • 0033980930 scopus 로고    scopus 로고
    • Role of neurotropins in rat embryonic testis morphogenesis (cord formation)
    • Levine E, Cupp AS, Skinner MK, (2000) Role of neurotropins in rat embryonic testis morphogenesis (cord formation). Biol Reprod 62: 132-142.
    • (2000) Biol Reprod , vol.62 , pp. 132-142
    • Levine, E.1    Cupp, A.S.2    Skinner, M.K.3
  • 43
    • 77955806637 scopus 로고    scopus 로고
    • Genome-wide analysis of DNA binding and transcriptional regulation by the mammalian Doublesex homolog DMRT1 in the juvenile testis
    • Murphy MW, Sarver AL, Rice D, Hatzi K, Ye K, et al. (2010) Genome-wide analysis of DNA binding and transcriptional regulation by the mammalian Doublesex homolog DMRT1 in the juvenile testis. Proc Natl Acad Sci U S A 107: 13360-13365.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 13360-13365
    • Murphy, M.W.1    Sarver, A.L.2    Rice, D.3    Hatzi, K.4    Ye, K.5
  • 44
    • 0033999447 scopus 로고    scopus 로고
    • Role of transforming growth factor-alpha and the epidermal growth factor receptor in embryonic rat testis development
    • Levine E, Cupp AS, Miyashiro L, Skinner MK, (2000) Role of transforming growth factor-alpha and the epidermal growth factor receptor in embryonic rat testis development. Biol Reprod 62: 477-490.
    • (2000) Biol Reprod , vol.62 , pp. 477-490
    • Levine, E.1    Cupp, A.S.2    Miyashiro, L.3    Skinner, M.K.4
  • 45
    • 33745549658 scopus 로고    scopus 로고
    • Epigenetic characterization of the early embryo with a chromatin immunoprecipitation protocol applicable to small cell populations
    • O'Neill LP, VerMilyea MD, Turner BM, (2006) Epigenetic characterization of the early embryo with a chromatin immunoprecipitation protocol applicable to small cell populations. Nat Genet 38: 835-841.
    • (2006) Nat Genet , vol.38 , pp. 835-841
    • O'Neill, L.P.1    VerMilyea, M.D.2    Turner, B.M.3
  • 46
    • 0242333835 scopus 로고    scopus 로고
    • Normalization of cDNA microarray data
    • Smyth GK, Speed T, (2003) Normalization of cDNA microarray data. Methods 31: 265-273.
    • (2003) Methods , vol.31 , pp. 265-273
    • Smyth, G.K.1    Speed, T.2
  • 47
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad BM, Irizarry RA, Astrand M, Speed TP, (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 49
    • 21844500220 scopus 로고
    • Algorithm AS 296: Optimal median smoothing
    • Hardle W, Steiger W, (1977) Algorithm AS 296: Optimal median smoothing. Appl Stat pp. 258-264.
    • (1977) Appl Stat , pp. 258-264
    • Hardle, W.1    Steiger, W.2


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