-
1
-
-
34247623568
-
Coats, tethers, Rabs, and SNAREs work together to mediate the intracellular destination of a transport vesicle
-
Cai H, Reinisch K, Ferro-Novick S. Coats, tethers, Rabs, and SNAREs work together to mediate the intracellular destination of a transport vesicle. Dev Cell 2007;12:671-682.
-
(2007)
Dev Cell
, vol.12
, pp. 671-682
-
-
Cai, H.1
Reinisch, K.2
Ferro-Novick, S.3
-
2
-
-
70149084564
-
A Rab GAP cascade defines the boundary between two Rab GTPases on the secretory pathway
-
Rivera-Molina FE, Novick PJ. A Rab GAP cascade defines the boundary between two Rab GTPases on the secretory pathway. Proc Natl Acad Sci USA 2009;106:14408-14413.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 14408-14413
-
-
Rivera-Molina, F.E.1
Novick, P.J.2
-
4
-
-
78751705945
-
New links between vesicle coats and Rab-mediated vesicle targeting
-
Angers CG, Merz AJ. New links between vesicle coats and Rab-mediated vesicle targeting. Semin Cell Dev Biol 2011;22:18-26.
-
(2011)
Semin Cell Dev Biol
, vol.22
, pp. 18-26
-
-
Angers, C.G.1
Merz, A.J.2
-
5
-
-
0033214775
-
Identification of the catalytic domains and their functionally critical arginine residues of two yeast GTPase-activating proteins specific for Ypt/Rab transport GTPases
-
Albert S, Will E, Gallwitz D. Identification of the catalytic domains and their functionally critical arginine residues of two yeast GTPase-activating proteins specific for Ypt/Rab transport GTPases. EMBO J 1999;18:5216-5225.
-
(1999)
EMBO J
, vol.18
, pp. 5216-5225
-
-
Albert, S.1
Will, E.2
Gallwitz, D.3
-
6
-
-
33746356908
-
TBC-domain GAPs for Rab GTPases accelerate GTP hydrolysis by a dual-finger mechanism
-
Pan X, Eathiraj S, Munson M, Lambright DG. TBC-domain GAPs for Rab GTPases accelerate GTP hydrolysis by a dual-finger mechanism. Nature 2006;442:303-306.
-
(2006)
Nature
, vol.442
, pp. 303-306
-
-
Pan, X.1
Eathiraj, S.2
Munson, M.3
Lambright, D.G.4
-
7
-
-
80052233389
-
Endosome maturation
-
Huotari J, Helenius A. Endosome maturation. EMBO J 2011;30:3481-3500.
-
(2011)
EMBO J
, vol.30
, pp. 3481-3500
-
-
Huotari, J.1
Helenius, A.2
-
8
-
-
56149112942
-
Regulation of retromer recruitment to endosomes by sequential action of Rab5 and Rab7
-
Rojas R, van Vlijmen T, Mardones GA, Prabhu Y, Rojas AL, Mohammed S, Heck AJ, Raposo G, van der Sluijs P, Bonifacino JS. Regulation of retromer recruitment to endosomes by sequential action of Rab5 and Rab7. J Cell Biol 2008;183:513-526.
-
(2008)
J Cell Biol
, vol.183
, pp. 513-526
-
-
Rojas, R.1
van Vlijmen, T.2
Mardones, G.A.3
Prabhu, Y.4
Rojas, A.L.5
Mohammed, S.6
Heck, A.J.7
Raposo, G.8
van der Sluijs, P.9
Bonifacino, J.S.10
-
9
-
-
78649723498
-
The Rab GTPase Ypt7 is linked to retromer-mediated receptor recycling and fusion at the yeast late endosome
-
Balderhaar HJ, Arlt H, Ostrowicz C, Brocker C, Sundermann F, Brandt R, Babst M, Ungermann C. The Rab GTPase Ypt7 is linked to retromer-mediated receptor recycling and fusion at the yeast late endosome. J Cell Sci 2010;123(Pt 23):4085-4094.
-
(2010)
J Cell Sci
, vol.123
, Issue.PART 23
, pp. 4085-4094
-
-
Balderhaar, H.J.1
Arlt, H.2
Ostrowicz, C.3
Brocker, C.4
Sundermann, F.5
Brandt, R.6
Babst, M.7
Ungermann, C.8
-
10
-
-
0028181704
-
Role of three rab5-like GTPases, Ypt51p, Ypt52p, and Ypt53p, in the endocytic and vacuolar protein sorting pathways of yeast
-
Singer-Kruger B, Stenmark H, Dusterhoft A, Philippsen P, Yoo JS, Gallwitz D, Zerial M. Role of three rab5-like GTPases, Ypt51p, Ypt52p, and Ypt53p, in the endocytic and vacuolar protein sorting pathways of yeast. J Cell Biol 1994;125:283-298.
-
(1994)
J Cell Biol
, vol.125
, pp. 283-298
-
-
Singer-Kruger, B.1
Stenmark, H.2
Dusterhoft, A.3
Philippsen, P.4
Yoo, J.S.5
Gallwitz, D.6
Zerial, M.7
-
11
-
-
0028847351
-
Yeast Ypt51p and mammalian Rab5: counterparts with similar function in the early endocytic pathway
-
Singer-Kruger B, Stenmark H, Zerial M. Yeast Ypt51p and mammalian Rab5: counterparts with similar function in the early endocytic pathway. J Cell Sci 1995;108(Pt 11):3509-3521.
-
(1995)
J Cell Sci
, vol.108
, Issue.PART 11
, pp. 3509-3521
-
-
Singer-Kruger, B.1
Stenmark, H.2
Zerial, M.3
-
12
-
-
0028348688
-
VPS21 encodes a rab5-like GTP binding protein that is required for the sorting of yeast vacuolar proteins
-
Horazdovsky BF, Busch GR, Emr SD. VPS21 encodes a rab5-like GTP binding protein that is required for the sorting of yeast vacuolar proteins. EMBO J 1994;13:1297-1309.
-
(1994)
EMBO J
, vol.13
, pp. 1297-1309
-
-
Horazdovsky, B.F.1
Busch, G.R.2
Emr, S.D.3
-
13
-
-
0027092937
-
Endocytosis in yeast: evidence for the involvement of a small GTP-binding protein (Ypt7p)
-
Wichmann H, Hengst L, Gallwitz D. Endocytosis in yeast: evidence for the involvement of a small GTP-binding protein (Ypt7p). Cell 1992;71:1131-1142.
-
(1992)
Cell
, vol.71
, pp. 1131-1142
-
-
Wichmann, H.1
Hengst, L.2
Gallwitz, D.3
-
14
-
-
24144442691
-
Rab conversion as a mechanism of progression from early to late endosomes
-
Rink J, Ghigo E, Kalaidzidis Y, Zerial M. Rab conversion as a mechanism of progression from early to late endosomes. Cell 2005;122:735-749.
-
(2005)
Cell
, vol.122
, pp. 735-749
-
-
Rink, J.1
Ghigo, E.2
Kalaidzidis, Y.3
Zerial, M.4
-
15
-
-
77954957013
-
Membrane budding and scission by the ESCRT machinery: it's all in the neck
-
Hurley JH, Hanson PI. Membrane budding and scission by the ESCRT machinery: it's all in the neck. Nat Rev Mol Cell Biol 2010;11:556-566.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 556-566
-
-
Hurley, J.H.1
Hanson, P.I.2
-
16
-
-
77950863406
-
Molecular mechanism of multivesicular body biogenesis by ESCRT complexes
-
Wollert T, Hurley JH. Molecular mechanism of multivesicular body biogenesis by ESCRT complexes. Nature 2010;464:864-869.
-
(2010)
Nature
, vol.464
, pp. 864-869
-
-
Wollert, T.1
Hurley, J.H.2
-
18
-
-
0034799673
-
The Ccz1 protein interacts with Ypt7 GTPase during fusion of multiple transport intermediates with the vacuole in S. cerevisiae
-
Kucharczyk R, Kierzek AM, Slonimski PP, Rytka J. The Ccz1 protein interacts with Ypt7 GTPase during fusion of multiple transport intermediates with the vacuole in S. cerevisiae. J Cell Sci 2001;114(Pt 17):3137-3145.
-
(2001)
J Cell Sci
, vol.114
, Issue.PART 17
, pp. 3137-3145
-
-
Kucharczyk, R.1
Kierzek, A.M.2
Slonimski, P.P.3
Rytka, J.4
-
19
-
-
77957231342
-
The Mon1-Ccz1 complex is the GEF of the late endosomal Rab7 homolog Ypt7
-
Nordmann M, Cabrera M, Perz A, Brocker C, Ostrowicz C, Engelbrecht-Vandre S, Ungermann C. The Mon1-Ccz1 complex is the GEF of the late endosomal Rab7 homolog Ypt7. Curr Biol 2010;20:1654-1659.
-
(2010)
Curr Biol
, vol.20
, pp. 1654-1659
-
-
Nordmann, M.1
Cabrera, M.2
Perz, A.3
Brocker, C.4
Ostrowicz, C.5
Engelbrecht-Vandre, S.6
Ungermann, C.7
-
20
-
-
0033584946
-
Two new members of a family of Ypt/Rab GTPase activating proteins. Promiscuity of substrate recognition
-
Albert S, Gallwitz D. Two new members of a family of Ypt/Rab GTPase activating proteins. Promiscuity of substrate recognition. J Biol Chem 1999;274:33186-33189.
-
(1999)
J Biol Chem
, vol.274
, pp. 33186-33189
-
-
Albert, S.1
Gallwitz, D.2
-
21
-
-
0028332917
-
The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene
-
Marcusson EG, Horazdovsky BF, Cereghino JL, Gharakhanian E, Emr SD. The sorting receptor for yeast vacuolar carboxypeptidase Y is encoded by the VPS10 gene. Cell 1994;77:579-586.
-
(1994)
Cell
, vol.77
, pp. 579-586
-
-
Marcusson, E.G.1
Horazdovsky, B.F.2
Cereghino, J.L.3
Gharakhanian, E.4
Emr, S.D.5
-
22
-
-
0031823307
-
A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast
-
Seaman MN, McCaffery JM, Emr SD. A membrane coat complex essential for endosome-to-Golgi retrograde transport in yeast. J Cell Biol 1998;142:665-681.
-
(1998)
J Cell Biol
, vol.142
, pp. 665-681
-
-
Seaman, M.N.1
McCaffery, J.M.2
Emr, S.D.3
-
23
-
-
0029977573
-
A yeast protein related to a mammalian Ras-binding protein, Vps9p, is required for localization of vacuolar proteins
-
Burd CG, Mustol PA, Schu PV, Emr SD. A yeast protein related to a mammalian Ras-binding protein, Vps9p, is required for localization of vacuolar proteins. Mol Cell Biol 1996;16:2369-2377.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 2369-2377
-
-
Burd, C.G.1
Mustol, P.A.2
Schu, P.V.3
Emr, S.D.4
-
24
-
-
0033545389
-
Vac1p coordinates Rab and phosphatidylinositol 3-kinase signaling in Vps45p-dependent vesicle docking/fusion at the endosome
-
Peterson MR, Burd CG, Emr SD. Vac1p coordinates Rab and phosphatidylinositol 3-kinase signaling in Vps45p-dependent vesicle docking/fusion at the endosome. Curr Biol 1999;9:159-162.
-
(1999)
Curr Biol
, vol.9
, pp. 159-162
-
-
Peterson, M.R.1
Burd, C.G.2
Emr, S.D.3
-
25
-
-
0032978370
-
The phosphatidylinositol 3-phosphate binding protein Vac1p interacts with a Rab GTPase and a Sec1p homologue to facilitate vesicle-mediated vacuolar protein sorting
-
Tall GG, Hama H, DeWald DB, Horazdovsky BF. The phosphatidylinositol 3-phosphate binding protein Vac1p interacts with a Rab GTPase and a Sec1p homologue to facilitate vesicle-mediated vacuolar protein sorting. Mol Biol Cell 1999;10:1873-1889.
-
(1999)
Mol Biol Cell
, vol.10
, pp. 1873-1889
-
-
Tall, G.G.1
Hama, H.2
DeWald, D.B.3
Horazdovsky, B.F.4
-
26
-
-
0033998821
-
VPS21 controls entry of endocytosed and biosynthetic proteins into the yeast prevacuolar compartment
-
Gerrard SR, Bryant NJ, Stevens TH. VPS21 controls entry of endocytosed and biosynthetic proteins into the yeast prevacuolar compartment. Mol Biol Cell 2000;11:613-626.
-
(2000)
Mol Biol Cell
, vol.11
, pp. 613-626
-
-
Gerrard, S.R.1
Bryant, N.J.2
Stevens, T.H.3
-
27
-
-
0038820382
-
Mechanism of ubiquitin recognition by the CUE domain of Vps9p
-
Prag G, Misra S, Jones EA, Ghirlando R, Davies BA, Horazdovsky BF, Hurley JH. Mechanism of ubiquitin recognition by the CUE domain of Vps9p. Cell 2003;113:609-620.
-
(2003)
Cell
, vol.113
, pp. 609-620
-
-
Prag, G.1
Misra, S.2
Jones, E.A.3
Ghirlando, R.4
Davies, B.A.5
Horazdovsky, B.F.6
Hurley, J.H.7
-
28
-
-
84866265657
-
Class E compartments form in response to ESCRT dysfunction in yeast due to hyperactivity of the Vps21 Rab GTPase
-
In press
-
Russell MRG, Shideler T, Nickerson DP, West M, Odorizzi G. Class E compartments form in response to ESCRT dysfunction in yeast due to hyperactivity of the Vps21 Rab GTPase. J Cell Sci 2012 (In press).
-
(2012)
J Cell Sci
-
-
Russell, M.R.G.1
Shideler, T.2
Nickerson, D.P.3
West, M.4
Odorizzi, G.5
-
29
-
-
0042991262
-
Vps27 recruits ESCRT machinery to endosomes during MVB sorting
-
Katzmann DJ, Stefan CJ, Babst M, Emr SD. Vps27 recruits ESCRT machinery to endosomes during MVB sorting. J Cell Biol 2003;162:413-423.
-
(2003)
J Cell Biol
, vol.162
, pp. 413-423
-
-
Katzmann, D.J.1
Stefan, C.J.2
Babst, M.3
Emr, S.D.4
-
30
-
-
0035945343
-
Human VPS34 is required for internal vesicle formation within multivesicular endosomes
-
Futter CE, Collinson LM, Backer JM, Hopkins CR. Human VPS34 is required for internal vesicle formation within multivesicular endosomes. J Cell Biol 2001;155:1251-1264.
-
(2001)
J Cell Biol
, vol.155
, pp. 1251-1264
-
-
Futter, C.E.1
Collinson, L.M.2
Backer, J.M.3
Hopkins, C.R.4
-
31
-
-
0032168684
-
Phosphoinositide signaling and turnover: PtdIns(3)P, a regulator of membrane traffic, is transported to the vacuole and degraded by a process that requires lumenal vacuolar hydrolase activities
-
Wurmser AE, Emr SD. Phosphoinositide signaling and turnover: PtdIns(3)P, a regulator of membrane traffic, is transported to the vacuole and degraded by a process that requires lumenal vacuolar hydrolase activities. EMBO J 1998;17:4930-4942.
-
(1998)
EMBO J
, vol.17
, pp. 4930-4942
-
-
Wurmser, A.E.1
Emr, S.D.2
-
32
-
-
0034282751
-
Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells
-
Gillooly DJ, Morrow IC, Lindsay M, Gould R, Bryant NJ, Gaullier JM, Parton RG, Stenmark H. Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells. EMBO J 2000;19:4577-4588.
-
(2000)
EMBO J
, vol.19
, pp. 4577-4588
-
-
Gillooly, D.J.1
Morrow, I.C.2
Lindsay, M.3
Gould, R.4
Bryant, N.J.5
Gaullier, J.M.6
Parton, R.G.7
Stenmark, H.8
-
33
-
-
0033174034
-
Phosphatidylinositol-3-OH kinases are Rab5 effectors
-
Christoforidis S, Miaczynska M, Ashman K, Wilm M, Zhao L, Yip SC, Waterfield MD, Backer JM, Zerial M. Phosphatidylinositol-3-OH kinases are Rab5 effectors. Nat Cell Biol 1999;1:249-252.
-
(1999)
Nat Cell Biol
, vol.1
, pp. 249-252
-
-
Christoforidis, S.1
Miaczynska, M.2
Ashman, K.3
Wilm, M.4
Zhao, L.5
Yip, S.C.6
Waterfield, M.D.7
Backer, J.M.8
Zerial, M.9
-
34
-
-
37749048772
-
ESCRT-III family members stimulate Vps4 ATPase activity directly or via Vta1
-
Azmi IF, Davies BA, Xiao J, Babst M, Xu Z, Katzmann DJ. ESCRT-III family members stimulate Vps4 ATPase activity directly or via Vta1. Dev Cell 2008;14:50-61.
-
(2008)
Dev Cell
, vol.14
, pp. 50-61
-
-
Azmi, I.F.1
Davies, B.A.2
Xiao, J.3
Babst, M.4
Xu, Z.5
Katzmann, D.J.6
-
35
-
-
77949465181
-
Regulators of Vps4 ATPase activity at endosomes differentially influence the size and rate of formation of intralumenal vesicles
-
Nickerson DP, West M, Henry R, Odorizzi G. Regulators of Vps4 ATPase activity at endosomes differentially influence the size and rate of formation of intralumenal vesicles. Mol Biol Cell 2010;21:1023-1032.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 1023-1032
-
-
Nickerson, D.P.1
West, M.2
Henry, R.3
Odorizzi, G.4
-
36
-
-
0038784064
-
Bro1 is an endosome-associated protein that functions in the MVB pathway in Saccharomyces cerevisiae
-
Odorizzi G, Katzmann DJ, Babst M, Audhya A, Emr SD. Bro1 is an endosome-associated protein that functions in the MVB pathway in Saccharomyces cerevisiae. J Cell Sci 2003;116(Pt 10):1893-1903.
-
(2003)
J Cell Sci
, vol.116
, Issue.PART 10
, pp. 1893-1903
-
-
Odorizzi, G.1
Katzmann, D.J.2
Babst, M.3
Audhya, A.4
Emr, S.D.5
-
37
-
-
17444384877
-
Discrimination between defects in elongation fidelity and termination efficiency provides mechanistic insights into translational readthrough
-
Salas-Marco J, Bedwell DM. Discrimination between defects in elongation fidelity and termination efficiency provides mechanistic insights into translational readthrough. J Mol Biol 2005;348:801-815.
-
(2005)
J Mol Biol
, vol.348
, pp. 801-815
-
-
Salas-Marco, J.1
Bedwell, D.M.2
-
38
-
-
41949089130
-
Yeast life span extension by depletion of 60s ribosomal subunits is mediated by Gcn4
-
Steffen KK, MacKay VL, Kerr EO, Tsuchiya M, Hu D, Fox LA, Dang N, Johnston ED, Oakes JA, Tchao BN, Pak DN, Fields S, Kennedy BK, Kaeberlein M. Yeast life span extension by depletion of 60s ribosomal subunits is mediated by Gcn4. Cell 2008;133:292-302.
-
(2008)
Cell
, vol.133
, pp. 292-302
-
-
Steffen, K.K.1
MacKay, V.L.2
Kerr, E.O.3
Tsuchiya, M.4
Hu, D.5
Fox, L.A.6
Dang, N.7
Johnston, E.D.8
Oakes, J.A.9
Tchao, B.N.10
Pak, D.N.11
Fields, S.12
Kennedy, B.K.13
Kaeberlein, M.14
-
39
-
-
0035903635
-
Sorting of proteins into multivesicular bodies: ubiquitin-dependent and -independent targeting
-
Reggiori F, Pelham HR. Sorting of proteins into multivesicular bodies: ubiquitin-dependent and -independent targeting. EMBO J 2001;20:5176-5186.
-
(2001)
EMBO J
, vol.20
, pp. 5176-5186
-
-
Reggiori, F.1
Pelham, H.R.2
-
40
-
-
33846821642
-
Direct binding to Rsp5 mediates ubiquitin-independent sorting of Sna3 via the multivesicular body pathway
-
McNatt MW, McKittrick I, West M, Odorizzi G. Direct binding to Rsp5 mediates ubiquitin-independent sorting of Sna3 via the multivesicular body pathway. Mol Biol Cell 2007;18:697-706.
-
(2007)
Mol Biol Cell
, vol.18
, pp. 697-706
-
-
McNatt, M.W.1
McKittrick, I.2
West, M.3
Odorizzi, G.4
-
41
-
-
0036697166
-
Endosome-associated complex, ESCRT-II, recruits transport machinery for protein sorting at the multivesicular body
-
Babst M, Katzmann DJ, Snyder WB, Wendland B, Emr SD. Endosome-associated complex, ESCRT-II, recruits transport machinery for protein sorting at the multivesicular body. Dev Cell 2002;3:283-289.
-
(2002)
Dev Cell
, vol.3
, pp. 283-289
-
-
Babst, M.1
Katzmann, D.J.2
Snyder, W.B.3
Wendland, B.4
Emr, S.D.5
-
42
-
-
33644525938
-
Recycling of ESCRTs by the AAA-ATPase Vps4 is regulated by a conserved VSL region in Vta1
-
Azmi I, Davies B, Dimaano C, Payne J, Eckert D, Babst M, Katzmann DJ. Recycling of ESCRTs by the AAA-ATPase Vps4 is regulated by a conserved VSL region in Vta1. J Cell Biol 2006;172:705-717.
-
(2006)
J Cell Biol
, vol.172
, pp. 705-717
-
-
Azmi, I.1
Davies, B.2
Dimaano, C.3
Payne, J.4
Eckert, D.5
Babst, M.6
Katzmann, D.J.7
-
43
-
-
78951470141
-
Bro1 binding to Snf7 regulates ESCRT-III membrane scission activity in yeast
-
Wemmer M, Azmi I, West M, Davies B, Katzmann D, Odorizzi G. Bro1 binding to Snf7 regulates ESCRT-III membrane scission activity in yeast. J Cell Biol 2011;192:295-306.
-
(2011)
J Cell Biol
, vol.192
, pp. 295-306
-
-
Wemmer, M.1
Azmi, I.2
West, M.3
Davies, B.4
Katzmann, D.5
Odorizzi, G.6
-
44
-
-
61949387423
-
Biochemical methods to monitor autophagy-related processes in yeast
-
Cheong H, Klionsky DJ. Biochemical methods to monitor autophagy-related processes in yeast. Methods Enzymol 2008;451:1-26.
-
(2008)
Methods Enzymol
, vol.451
, pp. 1-26
-
-
Cheong, H.1
Klionsky, D.J.2
-
46
-
-
78649682788
-
Membrane delivery to the yeast autophagosome from the Golgi-endosomal system
-
Ohashi Y, Munro S. Membrane delivery to the yeast autophagosome from the Golgi-endosomal system. Mol Biol Cell 2010;21:3998-4008.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 3998-4008
-
-
Ohashi, Y.1
Munro, S.2
-
47
-
-
75749090429
-
Tor directly controls the Atg1 kinase complex to regulate autophagy
-
Kamada Y, Yoshino K, Kondo C, Kawamata T, Oshiro N, Yonezawa K, Ohsumi Y. Tor directly controls the Atg1 kinase complex to regulate autophagy. Mol Cell Biol 2010;30:1049-1058.
-
(2010)
Mol Cell Biol
, vol.30
, pp. 1049-1058
-
-
Kamada, Y.1
Yoshino, K.2
Kondo, C.3
Kawamata, T.4
Oshiro, N.5
Yonezawa, K.6
Ohsumi, Y.7
-
48
-
-
79953164946
-
2+ influx system revealed through a genome-wide screen in yeast
-
2+ influx system revealed through a genome-wide screen in yeast. J Biol Chem 2011;286:10744-10754.
-
(2011)
J Biol Chem
, vol.286
, pp. 10744-10754
-
-
Martin, D.C.1
Kim, H.2
Mackin, N.A.3
Maldonado-Baez, L.4
Evangelista Jr, C.C.5
Beaudry, V.G.6
Dudgeon, D.D.7
Naiman, D.Q.8
Erdman, S.E.9
Cunningham, K.W.10
-
49
-
-
0037163129
-
Genome-wide analysis of gene expression regulated by the calcineurin/Crz1p signaling pathway in Saccharomyces cerevisiae
-
Yoshimoto H, Saltsman K, Gasch AP, Li HX, Ogawa N, Botstein D, Brown PO, Cyert MS. Genome-wide analysis of gene expression regulated by the calcineurin/Crz1p signaling pathway in Saccharomyces cerevisiae. J Biol Chem 2002;277:31079-31088.
-
(2002)
J Biol Chem
, vol.277
, pp. 31079-31088
-
-
Yoshimoto, H.1
Saltsman, K.2
Gasch, A.P.3
Li, H.X.4
Ogawa, N.5
Botstein, D.6
Brown, P.O.7
Cyert, M.S.8
-
50
-
-
2642566765
-
Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone
-
MacKay VL, Li X, Flory MR, Turcott E, Law GL, Serikawa KA, Xu XL, Lee H, Goodlett DR, Aebersold R, Zhao LP, Morris DR. Gene expression analyzed by high-resolution state array analysis and quantitative proteomics: response of yeast to mating pheromone. Mol Cell Proteomics 2004;3:478-489.
-
(2004)
Mol Cell Proteomics
, vol.3
, pp. 478-489
-
-
MacKay, V.L.1
Li, X.2
Flory, M.R.3
Turcott, E.4
Law, G.L.5
Serikawa, K.A.6
Xu, X.L.7
Lee, H.8
Goodlett, D.R.9
Aebersold, R.10
Zhao, L.P.11
Morris, D.R.12
-
51
-
-
79955506969
-
Non-SCF-type F-box protein Roy1/Ymr258c interacts with a Rab5-like GTPase Ypt52 and inhibits Ypt52 function
-
Liu Y, Nakatsukasa K, Kotera M, Kanada A, Nishimura T, Kishi T, Mimura S, Kamura T. Non-SCF-type F-box protein Roy1/Ymr258c interacts with a Rab5-like GTPase Ypt52 and inhibits Ypt52 function. Mol Biol Cell 2011;22:1575-1584.
-
(2011)
Mol Biol Cell
, vol.22
, pp. 1575-1584
-
-
Liu, Y.1
Nakatsukasa, K.2
Kotera, M.3
Kanada, A.4
Nishimura, T.5
Kishi, T.6
Mimura, S.7
Kamura, T.8
-
52
-
-
52249085200
-
Efficient termination of vacuolar Rab GTPase signaling requires coordinated action by a GAP and a protein kinase
-
Brett CL, Plemel RL, Lobinger BT, Vignali M, Fields S, Merz AJ. Efficient termination of vacuolar Rab GTPase signaling requires coordinated action by a GAP and a protein kinase. J Cell Biol 2008;182:1141-1151.
-
(2008)
J Cell Biol
, vol.182
, pp. 1141-1151
-
-
Brett, C.L.1
Plemel, R.L.2
Lobinger, B.T.3
Vignali, M.4
Fields, S.5
Merz, A.J.6
-
53
-
-
0041475853
-
The GAP activity of Msb3p and Msb4p for the Rab GTPase Sec4p is required for efficient exocytosis and actin organization
-
Gao XD, Albert S, Tcheperegine SE, Burd CG, Gallwitz D, Bi E. The GAP activity of Msb3p and Msb4p for the Rab GTPase Sec4p is required for efficient exocytosis and actin organization. J Cell Biol 2003;162:635-646.
-
(2003)
J Cell Biol
, vol.162
, pp. 635-646
-
-
Gao, X.D.1
Albert, S.2
Tcheperegine, S.E.3
Burd, C.G.4
Gallwitz, D.5
Bi, E.6
-
54
-
-
0034672007
-
Sequential action of two GTPases to promote vacuole docking and fusion
-
Eitzen G, Will E, Gallwitz D, Haas A, Wickner W. Sequential action of two GTPases to promote vacuole docking and fusion. EMBO J 2000;19:6713-6720.
-
(2000)
EMBO J
, vol.19
, pp. 6713-6720
-
-
Eitzen, G.1
Will, E.2
Gallwitz, D.3
Haas, A.4
Wickner, W.5
-
55
-
-
77951918362
-
Identification of the switch in early-to-late endosome transition
-
Poteryaev D, Datta S, Ackema K, Zerial M, Spang A. Identification of the switch in early-to-late endosome transition. Cell 2010;141:497-508.
-
(2010)
Cell
, vol.141
, pp. 497-508
-
-
Poteryaev, D.1
Datta, S.2
Ackema, K.3
Zerial, M.4
Spang, A.5
-
56
-
-
84863522480
-
The Msb3 GAP controls the activity of the Rab GTPases Vps21 and Ypt7 at endosomes and vacuoles
-
Lachmann J, Barr FA, Ungermann C. The Msb3 GAP controls the activity of the Rab GTPases Vps21 and Ypt7 at endosomes and vacuoles. Mol Biol Cell 2012;23(Pt 13):2516-2526.
-
(2012)
Mol Biol Cell
, vol.23
, Issue.PART 13
, pp. 2516-2526
-
-
Lachmann, J.1
Barr, F.A.2
Ungermann, C.3
-
57
-
-
0030460781
-
A novel RING finger protein, Vps8p, functionally interacts with the small GTPase, Vps21p, to facilitate soluble vacuolar protein localization
-
Horazdovsky BF, Cowles CR, Mustol P, Holmes M, Emr SD. A novel RING finger protein, Vps8p, functionally interacts with the small GTPase, Vps21p, to facilitate soluble vacuolar protein localization. J Biol Chem 1996;271:33607-33615.
-
(1996)
J Biol Chem
, vol.271
, pp. 33607-33615
-
-
Horazdovsky, B.F.1
Cowles, C.R.2
Mustol, P.3
Holmes, M.4
Emr, S.D.5
-
58
-
-
34247568898
-
The CORVET tethering complex interacts with the yeast Rab5 homolog Vps21 and is involved in endo-lysosomal biogenesis
-
Peplowska K, Markgraf DF, Ostrowicz CW, Bange G, Ungermann C. The CORVET tethering complex interacts with the yeast Rab5 homolog Vps21 and is involved in endo-lysosomal biogenesis. Dev Cell 2007;12:739-750.
-
(2007)
Dev Cell
, vol.12
, pp. 739-750
-
-
Peplowska, K.1
Markgraf, D.F.2
Ostrowicz, C.W.3
Bange, G.4
Ungermann, C.5
-
59
-
-
77956490410
-
Defined subunit arrangement and rab interactions are required for functionality of the HOPS tethering complex
-
Ostrowicz CW, Brocker C, Ahnert F, Nordmann M, Lachmann J, Peplowska K, Perz A, Auffarth K, Engelbrecht-Vandre S, Ungermann C. Defined subunit arrangement and rab interactions are required for functionality of the HOPS tethering complex. Traffic 2010;11:1334-1346.
-
(2010)
Traffic
, vol.11
, pp. 1334-1346
-
-
Ostrowicz, C.W.1
Brocker, C.2
Ahnert, F.3
Nordmann, M.4
Lachmann, J.5
Peplowska, K.6
Perz, A.7
Auffarth, K.8
Engelbrecht-Vandre, S.9
Ungermann, C.10
-
60
-
-
79954590449
-
Subunit organization and Rab interactions of Vps-C protein complexes that control endolysosomal membrane traffic
-
Plemel RL, Lobingier BT, Brett CL, Angers CG, Nickerson DP, Paulsel A, Sprague D, Merz AJ. Subunit organization and Rab interactions of Vps-C protein complexes that control endolysosomal membrane traffic. Mol Biol Cell 2011;22:1353-1363.
-
(2011)
Mol Biol Cell
, vol.22
, pp. 1353-1363
-
-
Plemel, R.L.1
Lobingier, B.T.2
Brett, C.L.3
Angers, C.G.4
Nickerson, D.P.5
Paulsel, A.6
Sprague, D.7
Merz, A.J.8
-
61
-
-
84855457001
-
Intrinsic tethering activity of endosomal Rab proteins
-
Lo SY, Brett CL, Plemel RL, Vignali M, Fields S, Gonen T, Merz AJ. Intrinsic tethering activity of endosomal Rab proteins. Nat Struct Mol Biol 2011;19:40-47.
-
(2011)
Nat Struct Mol Biol
, vol.19
, pp. 40-47
-
-
Lo, S.Y.1
Brett, C.L.2
Plemel, R.L.3
Vignali, M.4
Fields, S.5
Gonen, T.6
Merz, A.J.7
-
62
-
-
33749173272
-
Bioinformatic and comparative localization of Rab proteins reveals functional insights into the uncharacterized GTPases Ypt10p and Ypt11p
-
Buvelot Frei S, Rahl PB, Nussbaum M, Briggs BJ, Calero M, Janeczko S, Regan AD, Chen CZ, Barral Y, Whittaker GR, Collins RN. Bioinformatic and comparative localization of Rab proteins reveals functional insights into the uncharacterized GTPases Ypt10p and Ypt11p. Mol Cell Biol 2006;26:7299-7317.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 7299-7317
-
-
Buvelot Frei, S.1
Rahl, P.B.2
Nussbaum, M.3
Briggs, B.J.4
Calero, M.5
Janeczko, S.6
Regan, A.D.7
Chen, C.Z.8
Barral, Y.9
Whittaker, G.R.10
Collins, R.N.11
-
63
-
-
77954185159
-
TBC-2 regulates RAB-5/RAB-7-mediated endosomal trafficking in Caenorhabditis elegans
-
Chotard L, Mishra AK, Sylvain MA, Tuck S, Lambright DG, Rocheleau CE. TBC-2 regulates RAB-5/RAB-7-mediated endosomal trafficking in Caenorhabditis elegans. Mol Biol Cell 2010;21:2285-2296.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 2285-2296
-
-
Chotard, L.1
Mishra, A.K.2
Sylvain, M.A.3
Tuck, S.4
Lambright, D.G.5
Rocheleau, C.E.6
-
64
-
-
33947398366
-
Central roles of small GTPases in the development of cell polarity in yeast and beyond
-
Park HO, Bi E. Central roles of small GTPases in the development of cell polarity in yeast and beyond. Microbiol Mol Biol Rev 2007;71:48-96.
-
(2007)
Microbiol Mol Biol Rev
, vol.71
, pp. 48-96
-
-
Park, H.O.1
Bi, E.2
-
65
-
-
0035886714
-
Rho1p and Cdc42p act after Ypt7p to regulate vacuole docking
-
Eitzen G, Thorngren N, Wickner W. Rho1p and Cdc42p act after Ypt7p to regulate vacuole docking. EMBO J 2001;20:5650-5656.
-
(2001)
EMBO J
, vol.20
, pp. 5650-5656
-
-
Eitzen, G.1
Thorngren, N.2
Wickner, W.3
-
66
-
-
35648963606
-
Stimulation of actin polymerization by vacuoles via Cdc42p-dependent signaling
-
Isgandarova S, Jones L, Forsberg D, Loncar A, Dawson J, Tedrick K, Eitzen G. Stimulation of actin polymerization by vacuoles via Cdc42p-dependent signaling. J Biol Chem 2007;282:30466-30475.
-
(2007)
J Biol Chem
, vol.282
, pp. 30466-30475
-
-
Isgandarova, S.1
Jones, L.2
Forsberg, D.3
Loncar, A.4
Dawson, J.5
Tedrick, K.6
Eitzen, G.7
-
67
-
-
84861423416
-
Rab5 is necessary for the biogenesis of the endolysosomal system in vivo
-
Zeigerer A, Gilleron J, Bogorad RL, Marsico G, Nonaka H, Seifert S, Epstein-Barash H, Kuchimanchi S, Peng CG, Ruda VM, Del Conte-Zerial P, Hengstler JG, Kalaidzidis Y, Koteliansky V, Zerial M. Rab5 is necessary for the biogenesis of the endolysosomal system in vivo. Nature. 2012;485:465-470.
-
(2012)
Nature
, vol.485
, pp. 465-470
-
-
Zeigerer, A.1
Gilleron, J.2
Bogorad, R.L.3
Marsico, G.4
Nonaka, H.5
Seifert, S.6
Epstein-Barash, H.7
Kuchimanchi, S.8
Peng, C.G.9
Ruda, V.M.10
Del Conte-Zerial, P.11
Hengstler, J.G.12
Kalaidzidis, Y.13
Koteliansky, V.14
Zerial, M.15
-
68
-
-
0023739386
-
Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases
-
Robinson JS, Klionsky DJ, Banta LM, Emr SD. Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases. Mol Cell Biol 1988;8:4936-4948.
-
(1988)
Mol Cell Biol
, vol.8
, pp. 4936-4948
-
-
Robinson, J.S.1
Klionsky, D.J.2
Banta, L.M.3
Emr, S.D.4
-
69
-
-
0032217266
-
Fab1p PtdIns(3)P 5-kinase function essential for protein sorting in the multivesicular body
-
Odorizzi G, Babst M, Emr SD. Fab1p PtdIns(3)P 5-kinase function essential for protein sorting in the multivesicular body. Cell 1998;95:847-858.
-
(1998)
Cell
, vol.95
, pp. 847-858
-
-
Odorizzi, G.1
Babst, M.2
Emr, S.D.3
-
70
-
-
0030891524
-
Endosomal transport function in yeast requires a novel AAA-type ATPase, Vps4p
-
Babst M, Sato TK, Banta LM, Emr SD. Endosomal transport function in yeast requires a novel AAA-type ATPase, Vps4p. EMBO J 1997;16:1820-1831.
-
(1997)
EMBO J
, vol.16
, pp. 1820-1831
-
-
Babst, M.1
Sato, T.K.2
Banta, L.M.3
Emr, S.D.4
-
71
-
-
0034157875
-
Mammalian tumor susceptibility gene 101 (TSG101) and the yeast homologue, Vps23p, both function in late endosomal trafficking
-
Babst M, Odorizzi G, Estepa EJ, Emr SD. Mammalian tumor susceptibility gene 101 (TSG101) and the yeast homologue, Vps23p, both function in late endosomal trafficking. Traffic 2000;1:248-258.
-
(2000)
Traffic
, vol.1
, pp. 248-258
-
-
Babst, M.1
Odorizzi, G.2
Estepa, E.J.3
Emr, S.D.4
-
72
-
-
33845317263
-
Did2 coordinates Vps4-mediated dissociation of ESCRT-III from endosomes
-
Nickerson DP, West M, Odorizzi G. Did2 coordinates Vps4-mediated dissociation of ESCRT-III from endosomes. J Cell Biol 2006;175:715-720.
-
(2006)
J Cell Biol
, vol.175
, pp. 715-720
-
-
Nickerson, D.P.1
West, M.2
Odorizzi, G.3
-
73
-
-
1842297740
-
Shuttle mutagenesis: a method of transposon mutagenesis for Saccharomyces cerevisiae
-
Seifert HS, Chen EY, So M, Heffron F. Shuttle mutagenesis: a method of transposon mutagenesis for Saccharomyces cerevisiae. Proc Natl Acad Sci USA 1986;83:735-739.
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 735-739
-
-
Seifert, H.S.1
Chen, E.Y.2
So, M.3
Heffron, F.4
-
74
-
-
0024669291
-
A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
-
Sikorski RS, Hieter P. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 1989;122:19-27.
-
(1989)
Genetics
, vol.122
, pp. 19-27
-
-
Sikorski, R.S.1
Hieter, P.2
-
75
-
-
35348818630
-
Excess vacuolar SNAREs drive lysis and Rab bypass fusion
-
Starai VJ, Jun Y, Wickner W. Excess vacuolar SNAREs drive lysis and Rab bypass fusion. Proc Natl Acad Sci USA 2007;104:13551-13558.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 13551-13558
-
-
Starai, V.J.1
Jun, Y.2
Wickner, W.3
-
77
-
-
0034581184
-
Invertase fusion proteins for analysis of protein trafficking in yeast
-
Darsow T, Odorizzi G, Emr SD. Invertase fusion proteins for analysis of protein trafficking in yeast. Methods Enzymol 2000;327:95-106.
-
(2000)
Methods Enzymol
, vol.327
, pp. 95-106
-
-
Darsow, T.1
Odorizzi, G.2
Emr, S.D.3
-
78
-
-
0028929242
-
A new vital stain for visualizing vacuolar membrane dynamics and endocytosis in yeast
-
Vida TA, Emr SD. A new vital stain for visualizing vacuolar membrane dynamics and endocytosis in yeast. J Cell Biol 1995;128:779-792.
-
(1995)
J Cell Biol
, vol.128
, pp. 779-792
-
-
Vida, T.A.1
Emr, S.D.2
-
79
-
-
77952308176
-
YODA: software to facilitate high-throughput analysis of chronological life span, growth rate, and survival in budding yeast
-
Olsen B, Murakami CJ, Kaeberlein M. YODA: software to facilitate high-throughput analysis of chronological life span, growth rate, and survival in budding yeast. BMC Bioinformatics 2010;11:141.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 141
-
-
Olsen, B.1
Murakami, C.J.2
Kaeberlein, M.3
|