-
1
-
-
0031008228
-
The ATP synthase - A splendid molecular machine
-
Boyer PD (1997) The ATP synthase - A splendid molecular machine. Annu Rev Biochem 66:717-749.
-
(1997)
Annu Rev Biochem
, vol.66
, pp. 717-749
-
-
Boyer, P.D.1
-
3
-
-
66249132322
-
Torque generation and elastic power transmission in the rotary F(O)F(1)-ATPase
-
Junge W, Sielaff H, Engelbrecht S (2009) Torque generation and elastic power transmission in the rotary F(O)F(1)-ATPase. Nature 459:364-370.
-
(2009)
Nature
, vol.459
, pp. 364-370
-
-
Junge, W.1
Sielaff, H.2
Engelbrecht, S.3
-
6
-
-
77950599731
-
Chemo-mechanical coupling in F(1)-ATPase revealed by catalytic site occupancy during catalysis
-
Shimo-Kon R, et al. (2010) Chemo-mechanical coupling in F(1)-ATPase revealed by catalytic site occupancy during catalysis. Biophys J 98:1227-1236.
-
(2010)
Biophys J
, vol.98
, pp. 1227-1236
-
-
Shimo-Kon, R.1
-
8
-
-
33645796449
-
Catalytic and mechanical cycles in F-ATP synthases. Fourth in the Cycles Review Series
-
Dimroth P, von Ballmoos C, Meier T (2006) Catalytic and mechanical cycles in F-ATP synthases. Fourth in the Cycles Review Series. EMBO Rep 7:276-282.
-
(2006)
EMBO Rep
, vol.7
, pp. 276-282
-
-
Dimroth, P.1
Von Ballmoos, C.2
Meier, T.3
-
10
-
-
0037055972
-
Coupling proton movements to c-ring rotation in F(1)F(o) ATP synthase: Aqueous access channels and helix rotations at the a-c interface
-
Fillingame RH, Angevine CM, Dmitriev OY (2002) Coupling proton movements to c-ring rotation in F(1)F(o) ATP synthase: Aqueous access channels and helix rotations at the a-c interface. Biochim Biophys Acta 1555:29-36.
-
(2002)
Biochim Biophys Acta
, vol.1555
, pp. 29-36
-
-
Fillingame, R.H.1
Angevine, C.M.2
Dmitriev, O.Y.3
-
11
-
-
77955505962
-
Essential arginine residue of the F(o)-a subunit in F(o)F(1)-ATP synthase has a role to prevent the proton shortcut without c-ring rotation in the F(o) proton channel
-
Mitome N, et al. (2010) Essential arginine residue of the F(o)-a subunit in F(o)F(1)-ATP synthase has a role to prevent the proton shortcut without c-ring rotation in the F(o) proton channel. Biochem J 430:171-177.
-
(2010)
Biochem J
, vol.430
, pp. 171-177
-
-
Mitome, N.1
-
12
-
-
0030715561
-
ATP synthase: An electrochemical transducer with rotatory mechanics
-
Junge W, Lill H, Engelbrecht S (1997) ATP synthase: An electrochemical transducer with rotatory mechanics. Trends Biochem Sci 22:420-423.
-
(1997)
Trends Biochem Sci
, vol.22
, pp. 420-423
-
-
Junge, W.1
Lill, H.2
Engelbrecht, S.3
-
13
-
-
1542289939
-
Insights into the molecular mechanism of rotation in the Fo sector of ATP synthase
-
Aksimentiev A, Balabin IA, Fillingame RH, Schulten K (2004) Insights into the molecular mechanism of rotation in the Fo sector of ATP synthase. Biophys J 86:1332-1344.
-
(2004)
Biophys J
, vol.86
, pp. 1332-1344
-
-
Aksimentiev, A.1
Balabin, I.A.2
Fillingame, R.H.3
Schulten, K.4
-
14
-
-
0034036511
-
An electrostatic mechanism closely reproducing observed behavior in the bacterial flagellar motor
-
Walz D, Caplan SR (2000) An electrostatic mechanism closely reproducing observed behavior in the bacterial flagellar motor. Biophys J 78:626-651.
-
(2000)
Biophys J
, vol.78
, pp. 626-651
-
-
Walz, D.1
Caplan, S.R.2
-
15
-
-
0027970177
-
0 ATP synthases suggested by double mutants of the a subunit
-
0 ATP synthases suggested by double mutants of the a subunit. J Biol Chem 269:30364-30369.
-
(1994)
J Biol Chem
, vol.269
, pp. 30364-30369
-
-
Vik, S.B.1
Antonio, B.J.2
-
16
-
-
0033609081
-
Energy transduction in the sodium F-ATPase of Propionigenium modestum
-
Dimroth P, Wang H, Grabe M, Oster G (1999) Energy transduction in the sodium F-ATPase of Propionigenium modestum. Proc Natl Acad Sci USA 96:4924-4929.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 4924-4929
-
-
Dimroth, P.1
Wang, H.2
Grabe, M.3
Oster, G.4
-
17
-
-
16644375462
-
Torque generation by the Fo motor of the sodium ATPase
-
Xing J, Wang H, von Ballmoos C, Dimroth P, Oster G (2004) Torque generation by the Fo motor of the sodium ATPase. Biophys J 87:2148-2163.
-
(2004)
Biophys J
, vol.87
, pp. 2148-2163
-
-
Xing, J.1
Wang, H.2
Von Ballmoos, C.3
Dimroth, P.4
Oster, G.5
-
18
-
-
66149107139
-
Simulating the electrostatic guidance of the vectorial translocations in hexameric helicases and translocases
-
Liu H, Shi Y, Chen XS, Warshel A (2009) Simulating the electrostatic guidance of the vectorial translocations in hexameric helicases and translocases. Proc Natl Acad Sci USA 106:7449-7454.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 7449-7454
-
-
Liu, H.1
Shi, Y.2
Chen, X.S.3
Warshel, A.4
-
19
-
-
80053391759
-
Capturing the essence of folding and functions of biomolecules using coarse-grained models
-
Hyeon C, Thirumalai D (2011) Capturing the essence of folding and functions of biomolecules using coarse-grained models. Nat Commun 2:487.
-
(2011)
Nat Commun
, vol.2
, pp. 487
-
-
Hyeon, C.1
Thirumalai, D.2
-
21
-
-
77951241004
-
Multiscale simulations of protein landscapes: Using coarsegrained models as reference potentials to full explicit models
-
Messer BM, et al. (2010) Multiscale simulations of protein landscapes: Using coarsegrained models as reference potentials to full explicit models. Proteins 78:1212-1227.
-
(2010)
Proteins
, vol.78
, pp. 1212-1227
-
-
Messer, B.M.1
-
22
-
-
0033581879
-
Structural changes linked to proton translocation by subunit c of the ATP synthase
-
Rastogi VK, Girvin ME (1999) Structural changes linked to proton translocation by subunit c of the ATP synthase. Nature 402:263-268.
-
(1999)
Nature
, vol.402
, pp. 263-268
-
-
Rastogi, V.K.1
Girvin, M.E.2
-
23
-
-
78649327875
-
Microscopic rotary mechanism of ion translocation in the F(o) complex of ATP synthases
-
Pogoryelov D, et al. (2010) Microscopic rotary mechanism of ion translocation in the F(o) complex of ATP synthases. Nat Chem Biol 6:891-899.
-
(2010)
Nat Chem Biol
, vol.6
, pp. 891-899
-
-
Pogoryelov, D.1
-
24
-
-
0242657369
-
Mechanics of coupling proton movements to c-ring rotation in ATP synthase
-
Fillingame RH, Angevine CM, Dmitriev OY (2003) Mechanics of coupling proton movements to c-ring rotation in ATP synthase. FEBS Lett 555:29-34.
-
(2003)
FEBS Lett
, vol.555
, pp. 29-34
-
-
Fillingame, R.H.1
Angevine, C.M.2
Dmitriev, O.Y.3
-
25
-
-
0035451052
-
What are the dielectric "constants" of proteins and how to validate electrostatic models?
-
Schutz CN, Warshel A (2001) What are the dielectric "constants" of proteins and how to validate electrostatic models? Proteins 44:400-417.
-
(2001)
Proteins
, vol.44
, pp. 400-417
-
-
Schutz, C.N.1
Warshel, A.2
-
27
-
-
33745685012
-
Using a charging coordinate in studies of ionization induced partial unfolding
-
Kato M, Warshel A (2006) Using a charging coordinate in studies of ionization induced partial unfolding. J Phys Chem B 110:11566-11570.
-
(2006)
J Phys Chem B
, vol.110
, pp. 11566-11570
-
-
Kato, M.1
Warshel, A.2
-
28
-
-
0345255628
-
Aqueous access pathways in subunit a of rotary ATP synthase extend to both sides of the membrane
-
Angevine CM, Herold KA, Fillingame RH (2003) Aqueous access pathways in subunit a of rotary ATP synthase extend to both sides of the membrane. Proc Natl Acad Sci USA 100:13179-13183.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 13179-13183
-
-
Angevine, C.M.1
Herold, K.A.2
Fillingame, R.H.3
-
30
-
-
33748456949
-
The barrier for proton transport in aquaporins as a challenge for electrostatic models: The role of protein relaxation in mutational calculations
-
Kato M, Pisliakov AV, Warshel A (2006) The barrier for proton transport in aquaporins as a challenge for electrostatic models: The role of protein relaxation in mutational calculations. Proteins 64:829-844.
-
(2006)
Proteins
, vol.64
, pp. 829-844
-
-
Kato, M.1
Pisliakov, A.V.2
Warshel, A.3
-
31
-
-
2942675081
-
The proton-driven rotor of ATP synthase: Ohmic conductance (10 fS), and absence of voltage gating
-
Feniouk BA, et al. (2004) The proton-driven rotor of ATP synthase: Ohmic conductance (10 fS), and absence of voltage gating. Biophys J 86:4094-4109.
-
(2004)
Biophys J
, vol.86
, pp. 4094-4109
-
-
Feniouk, B.A.1
-
32
-
-
0018504783
-
Conversion of light energy to electrostatic energy in the proton pump of Halobacterium halobium
-
Warshel A (1979) Conversion of light energy to electrostatic energy in the proton pump of Halobacterium halobium. Photochem Photobiol 30:285.
-
(1979)
Photochem Photobiol
, vol.30
, pp. 285
-
-
Warshel, A.1
-
33
-
-
0000467270
-
Electrostatic basis of structure-function correlation in proteins
-
Warshel A (1981) Electrostatic basis of structure-function correlation in proteins. Acc Chem Res 14:284-290.
-
(1981)
Acc Chem Res
, vol.14
, pp. 284-290
-
-
Warshel, A.1
-
34
-
-
79751528117
-
Exploration of the cytochrome c oxidase pathway puzzle and examination of the origin of elusive mutational effects
-
Chakrabarty S, Namslauer I, Brzezinski P, Warshel A (2011) Exploration of the cytochrome c oxidase pathway puzzle and examination of the origin of elusive mutational effects. Biochim Biophys Acta 1807:413-426.
-
(2011)
Biochim Biophys Acta
, vol.1807
, pp. 413-426
-
-
Chakrabarty, S.1
Namslauer, I.2
Brzezinski, P.3
Warshel, A.4
-
35
-
-
12344277810
-
Realistic simulations of proton transport along the gramicidin channel: Demonstrating the importance of solvation effects
-
Braun-Sand S, Burykin A, Chu ZT, Warshel A (2005) Realistic simulations of proton transport along the gramicidin channel: Demonstrating the importance of solvation effects. J Phys Chem B 109:583-592.
-
(2005)
J Phys Chem B
, vol.109
, pp. 583-592
-
-
Braun-Sand, S.1
Burykin, A.2
Chu, Z.T.3
Warshel, A.4
-
36
-
-
79951503523
-
Renormalizing SMD: The renormalization approach and its use in long time simulations and accelerated PMF calculations of macromolecules
-
Dryga A, Warshel A (2010) Renormalizing SMD: The renormalization approach and its use in long time simulations and accelerated PMF calculations of macromolecules. J Phys Chem B 114:12720-12728.
-
(2010)
J Phys Chem B
, vol.114
, pp. 12720-12728
-
-
Dryga, A.1
Warshel, A.2
-
38
-
-
84866274097
-
Capturing the energetics of water insertion in biological systems: The water flooding approach
-
in press
-
Chakrabarty S, Warshel A (2012) Capturing the energetics of water insertion in biological systems: The water flooding approach. Proteins, in press.
-
(2012)
Proteins
-
-
Chakrabarty, S.1
Warshel, A.2
-
40
-
-
70350453758
-
Enzyme millisecond conformational dynamics do not catalyze the chemical step
-
Pisliakov AV, Cao J, Kamerlin SC, Warshel A (2009) Enzyme millisecond conformational dynamics do not catalyze the chemical step. Proc Natl Acad Sci USA 106:17359-17364.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 17359-17364
-
-
Pisliakov, A.V.1
Cao, J.2
Kamerlin, S.C.3
Warshel, A.4
|