Denaturing gradient gel electrophoresis and barcoded pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples

Applied and Environmental Microbiology

Volumn 78, Issue 16, 2012, Pages 5520-5528

  Pires, Ana C C ^a   Cleary, Daniel F R ^a   Almeida, Adelaide ^a   Cunha, Ângela ^a   Dealtry, Simone ^b   Mendonça Hagler, Leda C S ^c   Smalla, Kornelia ^b   Gomes, Newton C M ^a  

^a UNIVERSITY OF AVEIRO   (Portugal)

^b INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^c FEDERAL UNIVERSITY OF RIO DE JANEIRO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA GENE; ARCHAEA; ARCHAEAL; DENATURING GRADIENT GEL ELECTROPHORESES (DGGE); LAGUNCULARIA RACEMOSA; MANGROVE SEDIMENTS; MANGROVE SPECIES; MANGROVE TREE; MICROHABITATS; NUTRIENT CYCLE; PYROSEQUENCING; SEDIMENT FLUX; STRUCTURAL DIFFERENCES;

ELECTROPHORESIS; GENES; MICROORGANISMS; NUTRIENTS; RNA; SEDIMENTOLOGY; SEDIMENTS;

SOILS;

ARCHAEAL DNA; ARCHAEAL RNA; RIBOSOME DNA; RNA 16S;

BACTERIUM; ELECTROKINESIS; FUNGUS; MANGROVE; NUTRIENT CYCLING; OPEN OCEAN; RHIZOSPHERE; SAMPLING; SPECIES DIVERSITY; SPECIES RICHNESS;

ARCHAEON; ARTICLE; BIODIVERSITY; BRAZIL; CHEMISTRY; CLASSIFICATION; CLUSTER ANALYSIS; COMBRETACEAE; DENATURING GRADIENT GEL ELECTROPHORESIS; DNA BARCODING; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT ROOT; RHIZOPHORACEAE; RHIZOSPHERE; RNA GENE; SEQUENCE HOMOLOGY;

ARCHAEA; BIODIVERSITY; BRAZIL; CLUSTER ANALYSIS; COMBRETACEAE; DENATURING GRADIENT GEL ELECTROPHORESIS; DNA BARCODING, TAXONOMIC; DNA, ARCHAEAL; DNA, RIBOSOMAL; GENES, RRNA; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT ROOTS; RHIZOPHORACEAE; RHIZOSPHERE; RNA, ARCHAEAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

BRAZIL; RIO DE JANEIRO [BRAZIL];

ARCHAEA; FUNGI; LAGUNCULARIA RACEMOSA; RHIZOPHORA MANGLE; RHIZOPHORACEAE;

EID: 84866146323     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00386-12     Document Type: Article

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