메뉴 건너뛰기




Volumn 12, Issue , 2012, Pages

Metagenomic and geochemical characterization of pockmarked sediments overlaying the Troll petroleum reservoir in the North Sea

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC HYDROCARBON; METHANE;

EID: 84866004891     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-12-203     Document Type: Article
Times cited : (26)

References (77)
  • 1
    • 0001730917 scopus 로고
    • Pockmarks on the scotian shelf
    • 10.1130/0016-7606(1970)81[3141:POTSS]2.0.CO;2
    • Pockmarks on the Scotian Shelf. King LH, Maclean B, GSA Bull 1970 81 3141 10.1130/0016-7606(1970)81[3141:POTSS]2.0.CO;2
    • (1970) GSA Bull , vol.81 , pp. 3141
    • King, L.H.1    MacLean, B.2
  • 2
    • 20444396627 scopus 로고    scopus 로고
    • Complex pockmarks with carbonate-ridges off mid-Norway: Products of sediment degassing
    • DOI 10.1016/j.margeo.2005.04.005, PII S0025322705001180
    • Complex pockmarks with carbonate-ridges off mid-Norway: Products of sediment degassing. Hovland M, Svensen H, Forsberg CF, Johansen H, Fichler C, Fosså JH, Jonsson R, Rueslåtten H, Mar Geol 2005 218 191 206 10.1016/j.margeo.2005.04.005 (Pubitemid 40801816)
    • (2005) Marine Geology , vol.218 , Issue.1-4 , pp. 191-206
    • Hovland, M.1    Svensen, H.2    Forsberg, C.F.3    Johansen, H.4    Fichler, C.5    Fossa, J.H.6    Jonsson, R.7    Rueslatten, H.8
  • 3
    • 34548510578 scopus 로고    scopus 로고
    • Mega-pockmarks and linear pockmark trains on the West African continental margin
    • DOI 10.1016/j.margeo.2007.05.002, PII S0025322707001417
    • Mega-pockmarks and linear pockmark trains on the West African continental margin. Pilcher R, Argent J, Mar Geol 2007 244 15 32 10.1016/j.margeo.2007.05. 002 (Pubitemid 47379706)
    • (2007) Marine Geology , vol.244 , Issue.1-4 , pp. 15-32
    • Pilcher, R.1    Argent, J.2
  • 4
    • 0008859997 scopus 로고
    • Modern biogenic gas-generated craters (sea-floor "pockmarks") on the Bering Shelf, Alaska
    • 10.1130/0016-7606(1979)90 <1144:MBGCSP>2.0.CO;2
    • Modern biogenic gas-generated craters (sea-floor "pockmarks") on the Bering Shelf, Alaska. Nelson H, Thor DR, Sandstrom MW, Kvenvolden KA, GSA Bull 1979 90 1144 1152 10.1130/0016-7606(1979)90<1144:MBGCSP>2.0.CO;2
    • (1979) GSA Bull , vol.90 , pp. 1144-1152
    • Nelson, H.1    Thor, D.R.2    Sandstrom, M.W.3    Kvenvolden, K.A.4
  • 5
    • 79960303138 scopus 로고    scopus 로고
    • More than a century of bathymetric observations and present-day shallow sediment characterization in Belfast Bay, Maine, USA: Implications for pockmark field longevity
    • 10.1007/s00367-011-0228-0
    • More than a century of bathymetric observations and present-day shallow sediment characterization in Belfast Bay, Maine, USA: implications for pockmark field longevity. Brothers LL, Kelley JT, Belknap DF, Barnhardt WA, Andrews BD, Maynard ML, Geo-Mar Lett 2011 31 237 248 10.1007/s00367-011-0228-0
    • (2011) Geo-Mar Lett , vol.31 , pp. 237-248
    • Brothers, L.L.1    Kelley, J.T.2    Belknap, D.F.3    Barnhardt, W.A.4    Andrews, B.D.5    Maynard, M.L.6
  • 6
    • 49749144797 scopus 로고    scopus 로고
    • Biogeochemical processes and microbial diversity of the Gullfaks and Tommeliten methane seeps (Northern North Sea)
    • 10.5194/bg-5-1127-2008
    • Biogeochemical processes and microbial diversity of the Gullfaks and Tommeliten methane seeps (Northern North Sea). Wegener G, Shovitri M, Knittel K, Niemann H, Hovland M, Boetius A, Biogeosciences 2008 5 1127 1144 10.5194/bg-5-1127-2008
    • (2008) Biogeosciences , vol.5 , pp. 1127-1144
    • Wegener, G.1    Shovitri, M.2    Knittel, K.3    Niemann, H.4    Hovland, M.5    Boetius, A.6
  • 9
    • 80053527163 scopus 로고    scopus 로고
    • A metagenomic study of methanotrophic microorganisms in Coal Oil Point seep sediments
    • 10.1186/1471-2180-11-221 21970369
    • A metagenomic study of methanotrophic microorganisms in Coal Oil Point seep sediments. Håvelsrud OE, Haverkamp T, Kristensen T, Jakobsen K, Rike AG, BMC Microbiol 2011 11 221 10.1186/1471-2180-11-221 21970369
    • (2011) BMC Microbiol , vol.11 , pp. 221
    • Håvelsrud, O.E.1    Haverkamp, T.2    Kristensen, T.3    Jakobsen, K.4    Rike, A.G.5
  • 10
    • 4444370893 scopus 로고    scopus 로고
    • Reverse methanogenesis: Testing the hypothesis with environmental genomics
    • DOI 10.1126/science.1100025
    • Reverse methanogenesis: Testing the hypothesis with environmental genomics. Hallam SJ, Putnam N, Preston CM, Detter JC, Rokhsar D, Richardson PM, DeLong EF, Science 2004 305 1457 1462 10.1126/science.1100025 15353801 (Pubitemid 39167664)
    • (2004) Science , vol.305 , Issue.5689 , pp. 1457-1462
    • Hallam, S.J.1    Putnam, N.2    Preston, C.M.3    Detter, J.C.4    Rokhsar, D.5    Richardson, P.H.6    DeLong, E.F.7
  • 11
    • 12244272161 scopus 로고    scopus 로고
    • Diversity and distribution of methanotrophic archaea at cold seeps
    • DOI 10.1128/AEM.71.1.467-479.2005
    • Diversity and distribution of methanotrophic archaea at cold seeps. Knittel K, Lösekann T, Boetius A, Kort R, Amann R, Appl Environ Microbiol 2005 71 467 479 10.1128/AEM.71.1.467-479.2005 15640223 (Pubitemid 40116303)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.1 , pp. 467-479
    • Knittel, K.1    Losekann, T.2    Boetius, A.3    Kort, R.4    Amann, R.5
  • 12
    • 70349559191 scopus 로고    scopus 로고
    • Anaerobic oxidation of methane: Progress with an unknown process
    • 10.1146/annurev.micro.61.080706.093130 19575572
    • Anaerobic oxidation of methane: Progress with an unknown process. Knittel K, Boetius A, Annu Rev Microbiol 2009 63 311 334 10.1146/annurev.micro.61. 080706.093130 19575572
    • (2009) Annu Rev Microbiol , vol.63 , pp. 311-334
    • Knittel, K.1    Boetius, A.2
  • 14
    • 67949089516 scopus 로고    scopus 로고
    • Pockmarks: Refuges for marine benthic biodiversity
    • 10.4319/lo.2009.54.5.1776
    • Pockmarks: Refuges for marine benthic biodiversity. Webb KE, Barnes DKA, Planke S, Limnol Oceanogr 2009 54 1776 1788 10.4319/lo.2009.54.5.1776
    • (2009) Limnol Oceanogr , vol.54 , pp. 1776-1788
    • Webb, K.E.1    Barnes, D.K.A.2    Planke, S.3
  • 16
    • 77951498138 scopus 로고    scopus 로고
    • Unit-pockmarks and their potential significance for predicting fluid flow
    • 10.1016/j.marpetgeo.2010.02.005
    • Unit-pockmarks and their potential significance for predicting fluid flow. Hovland M, Heggland R, De Vries MH, Tjelta TI, Mar Pet Geol 2010 27 1190 1199 10.1016/j.marpetgeo.2010.02.005
    • (2010) Mar Pet Geol , vol.27 , pp. 1190-1199
    • Hovland, M.1    Heggland, R.2    De Vries, M.H.3    Tjelta, T.I.4
  • 17
    • 0031077877 scopus 로고    scopus 로고
    • Petroleum migration, alteration, and remigration within Troll field, Norwegian North Sea
    • Petroleum migration, alteration, and remigration within Troll field, Norwegian North Sea. Horstad I, Larter SR, AAPG Bull 1997 81 222 248
    • (1997) AAPG Bull , vol.81 , pp. 222-248
    • Horstad, I.1    Larter, S.R.2
  • 19
    • 0030620740 scopus 로고    scopus 로고
    • Light hydrocarbon gases in shallow sediments in the northern north sea
    • DOI 10.1016/S0025-3227(96)00081-3, PII S0025322796000813
    • Light hydrocarbon gases in shallow sediments in the northern North Sea. Brekke T, Lønne O, Ohm SE, Mar Geol 1997 137 81 108 10.1016/S0025- 3227(96)00081-3 (Pubitemid 27165109)
    • (1997) Marine Geology , vol.137 , Issue.1-2 , pp. 81-108
    • Brekke, T.1    Lonne, O.2    Ohm, S.E.3
  • 20
    • 34249936102 scopus 로고    scopus 로고
    • Obligate oil-degrading marine bacteria
    • DOI 10.1016/j.copbio.2007.04.006, PII S0958166907000559, Energy biotechnology / Environmental biotechnology
    • Obligate oil-degrading marine bacteria. Yakimov MM, Timmis KN, Golyshin PN, Curr Opin Biotechnol 2007 18 257 266 10.1016/j.copbio.2007.04.006 17493798 (Pubitemid 46880285)
    • (2007) Current Opinion in Biotechnology , vol.18 , Issue.3 , pp. 257-266
    • Yakimov, M.M.1    Timmis, K.N.2    Golyshin, P.N.3
  • 21
    • 33645994824 scopus 로고    scopus 로고
    • Marine microorganisms make a meal of oil
    • 10.1038/nrmicro1348 16489346
    • Marine microorganisms make a meal of oil. Head IM, Jones DM, Röling WFM, Nat Rev Microbiol 2006 4 173 182 10.1038/nrmicro1348 16489346
    • (2006) Nat Rev Microbiol , vol.4 , pp. 173-182
    • Head, I.M.1    Jones, D.M.2    Röling, W.F.M.3
  • 22
    • 77954405374 scopus 로고    scopus 로고
    • Microbial community structure of a heavy fuel oil-degrading marine consortium: Linking microbial dynamics with polycyclic aromatic hydrocarbon utilization
    • 20528986
    • Microbial community structure of a heavy fuel oil-degrading marine consortium: linking microbial dynamics with polycyclic aromatic hydrocarbon utilization. Vila J, Nieto JM, Mertens J, Springael D, Grifoll M, FEMS Microbiol Ecol 2010 73 349 362 20528986
    • (2010) FEMS Microbiol Ecol , vol.73 , pp. 349-362
    • Vila, J.1    Nieto, J.M.2    Mertens, J.3    Springael, D.4    Grifoll, M.5
  • 23
    • 72949106034 scopus 로고    scopus 로고
    • Novel Alkane Hydroxylase Gene (alkB) Diversity in Sediments Associated with Hydrocarbon Seeps in the Timor Sea, Australia
    • 10.1128/AEM.01370-09 19820158
    • Novel Alkane Hydroxylase Gene (alkB) Diversity in Sediments Associated with Hydrocarbon Seeps in the Timor Sea, Australia. Wasmund K, Burns KA, Kurtböke DI, Bourne DG, Appl Environ Microbiol 2009 75 7391 7398 10.1128/AEM.01370-09 19820158
    • (2009) Appl Environ Microbiol , vol.75 , pp. 7391-7398
    • Wasmund, K.1    Burns, K.A.2    Kurtböke, D.I.3    Bourne, D.G.4
  • 24
    • 33748324500 scopus 로고    scopus 로고
    • Prokaryotic diversity and metabolically active microbial populations in sediments from an active mud volcano in the Gulf of Mexico
    • DOI 10.1111/j.1462-2920.2006.01063.x
    • Prokaryotic diversity and metabolically active microbial populations in sediments from an active mud volcano in the Gulf of Mexico. Martinez RJ, Mills HJ, Story S, Sobecky PA, Environ Microbiol 2006 8 1783 1796 10.1111/j.1462-2920. 2006.01063.x 16958759 (Pubitemid 44326470)
    • (2006) Environmental Microbiology , vol.8 , Issue.10 , pp. 1783-1796
    • Martinez, R.J.1    Mills, H.J.2    Story, S.3    Sobecky, P.A.4
  • 26
    • 77954834592 scopus 로고    scopus 로고
    • Average genome size: A potential source of bias in comparative metagenomics
    • 10.1038/ismej.2010.29 20336158
    • Average genome size: a potential source of bias in comparative metagenomics. Beszteri B, Temperton B, Frickenhaus S, Giovannoni SJ, ISME J 2010 4 1075 1077 10.1038/ismej.2010.29 20336158
    • (2010) ISME J , vol.4 , pp. 1075-1077
    • Beszteri, B.1    Temperton, B.2    Frickenhaus, S.3    Giovannoni, S.J.4
  • 27
    • 50049129957 scopus 로고    scopus 로고
    • Reorganization and monophyly of the genus Rickettsiella: All in good time
    • 10.1128/AEM.00446-08 18695072
    • Reorganization and monophyly of the genus Rickettsiella: All in good time. Leclerque A, Cordaux R, Bouchon D, Appl Environ Microbiol 2008 74 5263 5264 10.1128/AEM.00446-08 18695072
    • (2008) Appl Environ Microbiol , vol.74 , pp. 5263-5264
    • Leclerque, A.1    Cordaux, R.2    Bouchon, D.3
  • 28
    • 77951945504 scopus 로고    scopus 로고
    • Identifying biologically relevant differences between metagenomic communities
    • 10.1093/bioinformatics/btq041 20130030
    • Identifying biologically relevant differences between metagenomic communities. Parks DH, Beiko RG, Bioinformatics 2010 26 715 721 10.1093/bioinformatics/btq041 20130030
    • (2010) Bioinformatics , vol.26 , pp. 715-721
    • Parks, D.H.1    Beiko, R.G.2
  • 30
    • 0031777276 scopus 로고    scopus 로고
    • Psychroflexus torquis gen. nov., sp. nov., a psychrophilic species from Antarctic sea ice, and reclassification of Flavobacterium gondwanense as Psychroflexus gondwanense gen. nov., comb. nov
    • Psychroflexus torquis gen. nov., sp. nov., a psychrophilic species from Antarctic sea ice, and reclassification of Flavobacterium gondwanense (Dobson et al. 1993) as Psychroflexus gondwanense gen. nov., comb. nov. Bowman JP, McCammon SA, Lewis T, Skerratt JH, Brown JL, Nichols DS, McMeekin TA, Microbiology-Uk 1998 144 1601 1609 10.1099/00221287-144-6-1601 (Pubitemid 28284537)
    • (1998) Microbiology , vol.144 , Issue.6 , pp. 1601-1609
    • Bowman, J.P.1    McCammon, S.A.2    Lewis, T.3    Skerratt, J.H.4    Brown, J.L.5    Nichols, D.S.6    McMeekin, T.A.7
  • 32
    • 77649174627 scopus 로고    scopus 로고
    • Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group
    • 10.1111/j.1462-2920.2009.02083.x 19878267
    • Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group. Meyerdierks A, Kube M, Kostadinov I, Teeling H, Glöckner FO, Reinhardt R, Amann R, Environ Microbiol 2010 12 422 439 10.1111/j.1462-2920.2009.02083.x 19878267
    • (2010) Environ Microbiol , vol.12 , pp. 422-439
    • Meyerdierks, A.1    Kube, M.2    Kostadinov, I.3    Teeling, H.4    Glöckner, F.O.5    Reinhardt, R.6    Amann, R.7
  • 35
    • 0031019834 scopus 로고    scopus 로고
    • 1 biosynthesis
    • Gene cluster for dissimilatory nitrite reductase (nir) from Pseudomonas aeruginosa: Sequencing and identification of a locus for heme d(1) biosynthesis. Kawasaki S, Arai H, Kodama T, Igarashi Y, J Bacteriol 1997 179 235 242 8982003 (Pubitemid 26428486)
    • (1997) Journal of Bacteriology , vol.179 , Issue.1 , pp. 235-242
    • Kawasaki, S.1    Arai, H.2    Kodama, T.3    Igarashi, Y.4
  • 36
    • 33744520321 scopus 로고    scopus 로고
    • Cytochromes P450 as versatile biocatalysts
    • DOI 10.1016/j.jbiotec.2006.01.026, PII S016816560600085X
    • Cytochromes P450 as versatile biocatalysts. Bernhardt R, J Biotechnol 2006 124 128 145 10.1016/j.jbiotec.2006.01.026 16516322 (Pubitemid 43816140)
    • (2006) Journal of Biotechnology , vol.124 , Issue.1 , pp. 128-145
    • Bernhardt, R.1
  • 37
    • 0347130086 scopus 로고    scopus 로고
    • Cultivation and Growth Characteristics of a Diverse Group of Oligotrophic Marine Gammaproteobacteria
    • DOI 10.1128/AEM.70.1.432-440.2004
    • Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria. Cho JC, Giovannoni SJ, Appl Environ Microbiol 2004 70 432 440 10.1128/AEM.70.1.432-440.2004 14711672 (Pubitemid 38090234)
    • (2004) Applied and Environmental Microbiology , vol.70 , Issue.1 , pp. 432-440
    • Cho, J.-C.1    Giovannoni, S.J.2
  • 38
    • 70350052417 scopus 로고    scopus 로고
    • Ammonia oxidation kinetics determine niche separation of nitrifying archaea and bacteria
    • 10.1038/nature08465 19794413
    • Ammonia oxidation kinetics determine niche separation of nitrifying archaea and bacteria. Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA, Nature 2009 461 976 U234 10.1038/nature08465 19794413
    • (2009) Nature , vol.461
    • Martens-Habbena, W.1    Berube, P.M.2    Urakawa, H.3    De La Torre, J.R.4    Stahl, D.A.5
  • 39
    • 0001052468 scopus 로고
    • The uptake of inorganic nutrients by heterotrophic bacteria
    • 10.1007/BF00166816
    • The uptake of inorganic nutrients by heterotrophic bacteria. Kirchman DL, Microb Ecol 1994 28 255 271 10.1007/BF00166816
    • (1994) Microb Ecol , vol.28 , pp. 255-271
    • Kirchman, D.L.1
  • 40
    • 61449202999 scopus 로고    scopus 로고
    • Bacterial degradation of aromatic compounds
    • 10.3390/ijerph6010278 19440284
    • Bacterial degradation of aromatic compounds. Seo JS, Keum YS, Li QX, Int J Environ Res Public Health 2009 6 278 309 10.3390/ijerph6010278 19440284
    • (2009) Int J Environ Res Public Health , vol.6 , pp. 278-309
    • Seo, J.S.1    Keum, Y.S.2    Li, Q.X.3
  • 41
    • 84859619916 scopus 로고    scopus 로고
    • Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill
    • Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill. Redmond MC, Valentine DL, Proc Natl Acad Sci U S A 2011
    • (2011) Proc Natl Acad Sci U S A
    • Redmond, M.C.1    Valentine, D.L.2
  • 42
    • 0025180428 scopus 로고
    • Microbial degradation of hydrocarbons in the environment
    • 2215423
    • Microbial degradation of hydrocarbons in the environment. Leahy JG, Colwell RR, Microbiol Rev 1990 54 305 315 2215423
    • (1990) Microbiol Rev , vol.54 , pp. 305-315
    • Leahy, J.G.1    Colwell, R.R.2
  • 44
    • 77649303058 scopus 로고    scopus 로고
    • Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep
    • 10.1371/journal.pone.0008735 20090945
    • Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep. Lloyd KG, Albert DB, Biddle JF, Chanton JP, Pizarro O, Teske A, PLoS One 2010 5 8735 10.1371/journal.pone.0008735 20090945
    • (2010) PLoS One , vol.5 , pp. 58735
    • Lloyd, K.G.1    Albert, D.B.2    Biddle, J.F.3    Chanton, J.P.4    Pizarro, O.5    Teske, A.6
  • 45
    • 79958053971 scopus 로고    scopus 로고
    • Microbial Ecology of the Dark Ocean above, at, and below the Seafloor
    • 10.1128/MMBR.00039-10 21646433
    • Microbial Ecology of the Dark Ocean above, at, and below the Seafloor. Orcutt BN, Sylvan JB, Knab NJ, Edwards KJ, Microbiol Mol Biol Rev 2011 75 361 422 10.1128/MMBR.00039-10 21646433
    • (2011) Microbiol Mol Biol Rev , vol.75 , pp. 361-422
    • Orcutt, B.N.1    Sylvan, J.B.2    Knab, N.J.3    Edwards, K.J.4
  • 47
    • 76149137256 scopus 로고    scopus 로고
    • Bacterial and archaeal communities in the surface sediment from the northern slope of the South China Sea
    • 19946953
    • Bacterial and archaeal communities in the surface sediment from the northern slope of the South China Sea. Liao L, Xu XW, Wang CS, Zhang DS, Wu M, J Zhejiang Univ Sci B 2009 10 890 901 19946953
    • (2009) J Zhejiang Univ Sci B , vol.10 , pp. 890-901
    • Liao, L.1    Xu, X.W.2    Wang, C.S.3    Zhang, D.S.4    Wu, M.5
  • 49
    • 0030620735 scopus 로고    scopus 로고
    • Alteration of natural gas during leakage from a North Sea salt diapir field
    • DOI 10.1016/S0025-3227(96)00080-1, PII S0025322796000801
    • Alteration of natural gas during leakage from a North Sea salt diapir field. Clayton CJ, Hay SJ, Baylis SA, Dipper B, Mar Geol 1997 137 69 80 10.1016/S0025-3227(96)00080-1 (Pubitemid 27165108)
    • (1997) Marine Geology , vol.137 , Issue.1-2 , pp. 69-80
    • Clayton, C.J.1    Hay, S.J.2    Baylis, S.A.3    Dipper, B.4
  • 50
    • 0034437363 scopus 로고    scopus 로고
    • Metabolism of alkylbenzenes, alkanes, and other hydrocarbons in anaerobic bacteria
    • DOI 10.1023/A:1011122631799
    • Metabolism of alkylbenzenes, alkanes, and other hydrocarbons in anaerobic bacteria. Spormann AM, Widdel F, Biodegradation 2000 11 85 105 10.1023/A:1011122631799 11440245 (Pubitemid 32544603)
    • (2000) Biodegradation , vol.11 , Issue.2-3 , pp. 85-105
    • Spormann, A.M.1    Widdel, F.2
  • 51
    • 79957985337 scopus 로고    scopus 로고
    • Anaerobic degradation of non-substituted aromatic hydrocarbons
    • 10.1016/j.copbio.2011.02.009 21398107
    • Anaerobic degradation of non-substituted aromatic hydrocarbons. Meckenstock RU, Mouttaki H, Curr Opin Biotechnol 2011 22 406 414 10.1016/j.copbio.2011.02.009 21398107
    • (2011) Curr Opin Biotechnol , vol.22 , pp. 406-414
    • Meckenstock, R.U.1    Mouttaki, H.2
  • 54
    • 79959289950 scopus 로고    scopus 로고
    • The Thaumarchaeota: An emerging view of their phylogeny and ecophysiology
    • 10.1016/j.mib.2011.04.007 21546306
    • The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Pester M, Schleper C, Wagner M, Curr Opin Microbiol 2011 14 300 306 10.1016/j.mib.2011.04.007 21546306
    • (2011) Curr Opin Microbiol , vol.14 , pp. 300-306
    • Pester, M.1    Schleper, C.2    Wagner, M.3
  • 55
    • 77956095401 scopus 로고    scopus 로고
    • Ammonia oxidation: Different niches for bacteria and archaea?
    • 10.1038/ismej.2010.111 20631805
    • Ammonia oxidation: different niches for bacteria and archaea? Schleper C, ISME J 2010 4 1092 1094 10.1038/ismej.2010.111 20631805
    • (2010) ISME J , vol.4 , pp. 1092-1094
    • Schleper, C.1
  • 56
    • 79953023347 scopus 로고    scopus 로고
    • Beyond the calvin cycle: Autotrophic carbon fixation in the ocean
    • Carlson CA, Giovannoni SJ Annual Review of Marine Science
    • Beyond the Calvin Cycle: Autotrophic Carbon Fixation in the Ocean. Hügler M, Sievert SM, Ann Rev Mar Sci. Volume 3., Carlson CA, Giovannoni SJ, 2011 261 289 Annual Review of Marine Science
    • (2011) Ann Rev Mar Sci. Volume 3. , pp. 261-289
    • Hügler, M.1    Sievert, S.M.2
  • 58
    • 34547588704 scopus 로고    scopus 로고
    • KAAS: An automatic genome annotation and pathway reconstruction server
    • 10.1093/nar/gkm321 17526522
    • KAAS: an automatic genome annotation and pathway reconstruction server. Moriya Y, Itoh M, Okuda S, Yoshizawa AC, Kanehisa M, Nucleic Acids Res 2007 35 182 W185 10.1093/nar/gkm321 17526522
    • (2007) Nucleic Acids Res , vol.35
    • Moriya, Y.1    Itoh, M.2    Okuda, S.3    Yoshizawa, A.C.4    Kanehisa, M.5
  • 60
    • 84873613850 scopus 로고    scopus 로고
    • Norwegian High-Throughput Sequencing Centre (NSC)
    • Norwegian High-Throughput Sequencing Centre (NSC), http://www.sequencing. uio.no
  • 61
    • 79952422304 scopus 로고    scopus 로고
    • Quality control and preprocessing of metagenomic datasets
    • 10.1093/bioinformatics/btr026 21278185
    • Quality control and preprocessing of metagenomic datasets. Schmieder R, Edwards R, Bioinformatics 2011 27 863 864 10.1093/bioinformatics/btr026 21278185
    • (2011) Bioinformatics , vol.27 , pp. 863-864
    • Schmieder, R.1    Edwards, R.2
  • 63
    • 77950645212 scopus 로고    scopus 로고
    • Artificial and natural duplicates in pyrosequencing reads of metagenomic data
    • Artificial and natural duplicates in pyrosequencing reads of metagenomic data. Niu BF, Fu LM, Sun SL, Li WZ, BMC Bioinforma 2010 11
    • (2010) BMC Bioinforma , vol.11
    • Niu, B.F.1    Fu, L.M.2    Sun, S.L.3    Li, W.Z.4
  • 64
    • 33847280283 scopus 로고    scopus 로고
    • Prediction of effective genome size in metagenomic samples
    • DOI 10.1186/gb-2007-8-1-r10
    • Prediction of effective genome size in metagenomic samples. Raes J, Korbel JO, Lercher MJ, von Mering C, Bork P, Genome Biol 2007 8 10 10.1186/gb-2007-8-1-r10 17224063 (Pubitemid 351910992)
    • (2007) Genome Biology , vol.8 , Issue.1
    • Raes, J.1    Korbel, J.O.2    Lercher, M.J.3    Von Mering, C.4    Bork, P.5
  • 66
    • 84873609787 scopus 로고    scopus 로고
    • Bioportal, http://www.bioportal.uio.no
    • Bioportal1
  • 68
    • 33847702910 scopus 로고    scopus 로고
    • MEGAN analysis of metagenomic data
    • DOI 10.1101/gr.5969107
    • MEGAN analysis of metagenomic data. Huson DH, Auch AF, Qi J, Schuster SC, Genome Res 2007 17 377 386 10.1101/gr.5969107 17255551 (Pubitemid 46376747)
    • (2007) Genome Research , vol.17 , Issue.3 , pp. 377-386
    • Huson, D.H.1    Auch, A.F.2    Qi, J.3    Schuster, S.C.4
  • 70
    • 84873609516 scopus 로고    scopus 로고
    • WebMGA, http://weizhong-lab.ucsd.edu/metagenomic-analysis
    • Webmga1
  • 71
    • 80052606131 scopus 로고    scopus 로고
    • WebMGA: A customizable web server for fast metagenomic sequence analysis
    • WebMGA: a customizable web server for fast metagenomic sequence analysis. Wu ST, Zhu ZW, Fu LM, Niu BF, Li WZ, BMC Genomics 2011 12
    • (2011) BMC Genomics , vol.12
    • Wu, S.T.1    Zhu, Z.W.2    Fu, L.M.3    Niu, B.F.4    Li, W.Z.5
  • 72
    • 84873608998 scopus 로고    scopus 로고
    • MG-RAST, http://metagenomics.anl.gov/v2
    • Mg-Rast1
  • 75
    • 84873613769 scopus 로고    scopus 로고
    • The R Project for Statistical Computing
    • The R Project for Statistical Computing, http://www.r-project.org
  • 77
    • 84855199947 scopus 로고    scopus 로고
    • R Development Core Team: R Vienna, Austria: R Foundation for Statistical Computing
    • R Development Core Team: R, A language and environment for statistical computing Vienna, Austria: R Foundation for Statistical Computing 2011
    • (2011) A Language and Environment for Statistical Computing


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.