메뉴 건너뛰기




Volumn 1267, Issue 1, 2012, Pages 45-52

Indirect selection of implicit mutation protocols

Author keywords

Evolvability; Indirect selection; Mutation rate; Protocols; Simple sequence repeats; Variation

Indexed keywords

ALLELE; ARTICLE; EVOLUTIONARY ADAPTATION; GENE MUTATION; GENETIC SELECTION; HUMAN; MOLECULAR EVOLUTION; MUTATION RATE; NATURAL SELECTION; SIMPLE SEQUENCE REPEAT; TRANSPOSON;

EID: 84865962447     PISSN: 00778923     EISSN: 17496632     Source Type: Book Series    
DOI: 10.1111/j.1749-6632.2012.06615.x     Document Type: Article
Times cited : (11)

References (58)
  • 2
    • 0003668973 scopus 로고
    • John Murray. London (Facsimile edition, p. 1964. Harvard University Press. Cambridge, Massachusetts .)
    • Darwin, C. 1859. On the Origin of Species by Means of Natural Selection. John Murray. London (Facsimile edition, p. 486. 1964. Harvard University Press. Cambridge, Massachusetts .)
    • (1859) On the Origin of Species by Means of Natural Selection , pp. 486
    • Darwin, C.1
  • 3
    • 0007565394 scopus 로고
    • Specific modifiers of eosin eye color in Drosophila melanogaster
    • Bridges, C.B. 1919. Specific modifiers of eosin eye color in Drosophila melanogaster. J. Exp. Zool. 28: 337-384.
    • (1919) J. Exp. Zool , vol.28 , pp. 337-384
    • Bridges, C.B.1
  • 4
    • 0003966570 scopus 로고
    • Eugenics Education Society. London
    • Galton, F. 1909. Essays in Eugenics. Eugenics Education Society. London
    • (1909) Essays in Eugenics
    • Galton, F.1
  • 6
    • 0001119463 scopus 로고
    • Essays on evolution: I. On the effects of selection on mutation rate
    • Sturtevant, A.H. 1937. Essays on evolution: I. On the effects of selection on mutation rate. Q. Rev. Biol. 12: 464-467.
    • (1937) Q. Rev. Biol. , vol.12 , pp. 464-467
    • Sturtevant, A.H.1
  • 8
    • 34447564992 scopus 로고    scopus 로고
    • Mutation rate variation in multicellular eukaryotes: causes and consequences
    • Baer, C.F., M.M. Miyamoto & D.R. Denver 2007. Mutation rate variation in multicellular eukaryotes: causes and consequences. Nat. Rev. Genet. 8: 619-631.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 619-631
    • Baer, C.F.1    Miyamoto, M.M.2    Denver, D.R.3
  • 9
    • 0037358947 scopus 로고    scopus 로고
    • What fraction of mutations reduces fitness?
    • Shaw, R.G., F.H. Shaw & C. Geyer 2003. What fraction of mutations reduces fitness? Evolution 57: 686-689.
    • (2003) Evolution , vol.57 , pp. 686-689
    • Shaw, R.G.1    Shaw, F.H.2    Geyer, C.3
  • 12
    • 0032810843 scopus 로고    scopus 로고
    • Molecular strategies in biological evolution
    • Caporale, L.H. 1999. Molecular strategies in biological evolution. Ann. N.Y. Acad. Sci. 870: xi-xii.
    • (1999) Ann. N.Y. Acad. Sci. , vol.870
    • Caporale, L.H.1
  • 14
    • 0242523875 scopus 로고    scopus 로고
    • Natural Selection and the emergence of a mutation phenotype: an update of the evolutionary synthesis considering mechanisms that affect genome variation
    • Caporale, L.H. 2003. Natural Selection and the emergence of a mutation phenotype: an update of the evolutionary synthesis considering mechanisms that affect genome variation. Annu. Rev. Microbiol. 57: 467-485.
    • (2003) Annu. Rev. Microbiol. , vol.57 , pp. 467-485
    • Caporale, L.H.1
  • 15
    • 4143091655 scopus 로고    scopus 로고
    • Evolvability is a selectable trait
    • Earl, D.J. & M.W. Deem 2004. Evolvability is a selectable trait. Proc. Nat. Acad. Sci. USA 101: 11531-11536.
    • (2004) Proc. Nat. Acad. Sci. USA , vol.101 , pp. 11531-11536
    • Earl, D.J.1    Deem, M.W.2
  • 17
    • 0003668973 scopus 로고
    • John Murray. London (Facsimile edition, 1964. Harvard University Press. Cambridge, Massachusetts.)
    • Darwin, C. 1859. On the Origin of Species by Means of Natural Selection. John Murray. London (Facsimile edition, p. 131. 1964. Harvard University Press. Cambridge, Massachusetts.)
    • (1859) On the Origin of Species by Means of Natural Selection , pp. 131
    • Darwin, C.1
  • 18
    • 35349012160 scopus 로고    scopus 로고
    • Mutation rate variation in eukaryotes: evolutionary implications of site-specific mechanisms
    • doi: 10.1038/nrg2158-c1.
    • King, D.G. & Y. Kashi 2007. Mutation rate variation in eukaryotes: evolutionary implications of site-specific mechanisms. Nature Rev. Genet. 8 doi: 10.1038/nrg2158-c1. http://www.nature.com/nrg/journal/v8/n11/full/nrg2158-c1.html.
    • (2007) Nature Rev. Genet. , vol.8
    • King, D.G.1    Kashi, Y.2
  • 19
    • 0036500834 scopus 로고    scopus 로고
    • Reverse engineering of biological complexity
    • Csete, M.E. & J.C. Doyle 2002. Reverse engineering of biological complexity. Science 295: 1664-1669.
    • (2002) Science , vol.295 , pp. 1664-1669
    • Csete, M.E.1    Doyle, J.C.2
  • 20
    • 33846601376 scopus 로고    scopus 로고
    • Implicit information in eukaryotic pathogens as the basis of antigenic variation
    • In:Lynn H. Caporale, Ed. Oxford University Press. New York.
    • Barry, D.J. 2006. Implicit information in eukaryotic pathogens as the basis of antigenic variation. In: The Implicit Genome. Lynn H. Caporale, Ed.: 91-106. Oxford University Press. New York
    • (2006) The Implicit Genome , pp. 91-106
    • Barry, D.J.1
  • 21
    • 35348952286 scopus 로고    scopus 로고
    • Somatic evolution of antibody genes
    • In: Lynn H. Caporale, Ed. Oxford University Press. New York.
    • Beale, R. & D. Iber 2006. Somatic evolution of antibody genes. In: The Implicit Genome. Lynn H. Caporale, Ed.: 177-190. Oxford University Press. New York
    • (2006) The Implicit Genome , pp. 177-190
    • Beale, R.1    Iber, D.2
  • 22
    • 78149432728 scopus 로고    scopus 로고
    • Variable tandem repeats accelerate evolution of coding and regulatory sequences
    • Gemayel, R., M.D. Vinces, M. Legendre & K.J. Verstrepen 2010. Variable tandem repeats accelerate evolution of coding and regulatory sequences. Annu. Rev. Genet. 44: 445-477.
    • (2010) Annu. Rev. Genet. , vol.44 , pp. 445-477
    • Gemayel, R.1    Vinces, M.D.2    Legendre, M.3    Verstrepen, K.J.4
  • 23
  • 24
    • 33750690617 scopus 로고    scopus 로고
    • Repeats and variation in pathogen selection
    • In: Lynn H. Caporale, Ed.:Oxford University Press. New York.
    • Bayliss, C.D. & E.R. Moxon 2006. Repeats and variation in pathogen selection. In: The Implicit Genome. Lynn H. Caporale, Ed.: 54-76. Oxford University Press. New York
    • (2006) The Implicit Genome , pp. 54-76
    • Bayliss, C.D.1    Moxon, E.R.2
  • 26
    • 0031442734 scopus 로고    scopus 로고
    • Natural variation in a Drosophila clock gene and temperature compensation
    • Sawyer, L.A., J. M. Hennessy, A.A. Peixoto, et al 1997. Natural variation in a Drosophila clock gene and temperature compensation. Science 278: 2117-2120.
    • (1997) Science , vol.278 , pp. 2117-2120
    • Sawyer, L.A.1    Hennessy, J.M.2    Peixoto, A.A.3
  • 27
    • 39649107543 scopus 로고    scopus 로고
    • Clines in clock genes: fine-tuning circadian rhythms to the environment
    • Kyriacou, C.P., A.A. Peixoto, F. Sandrelli, et al 2008. Clines in clock genes: fine-tuning circadian rhythms to the environment. Trends Genet. 24: 124-132.
    • (2008) Trends Genet. , vol.24 , pp. 124-132
    • Kyriacou, C.P.1    Peixoto, A.A.2    Sandrelli, F.3
  • 28
    • 36248998802 scopus 로고    scopus 로고
    • Avian Clock gene polymorphism: evidence for a latitudinal cline in allele frequencies
    • Johnsen, A., A.E. Fidler, S. Kuhn, et al 2007. Avian Clock gene polymorphism: evidence for a latitudinal cline in allele frequencies. Mol. Ecol. 16: 4867-4880.
    • (2007) Mol. Ecol , vol.16 , pp. 4867-4880
    • Johnsen, A.1    Fidler, A.E.2    Kuhn, S.3
  • 29
    • 4644367204 scopus 로고    scopus 로고
    • Positive selection on MMP3 regulation has shaped heart disease risk
    • Rockman, M.V., M.W. Hahn, N. Soranzo, et al 2004. Positive selection on MMP3 regulation has shaped heart disease risk. Current Biol. 14: 1531-1539.
    • (2004) Current Biol , vol.14 , pp. 1531-1539
    • Rockman, M.V.1    Hahn, M.W.2    Soranzo, N.3
  • 30
    • 25144494777 scopus 로고    scopus 로고
    • Intragenic tandem repeats generate functional variability
    • Verstrepen, K.J., A. Jansen, F. Lewitter & G.R. Fink 2005. Intragenic tandem repeats generate functional variability. Nature Genet. 37: 986-990.
    • (2005) Nature Genet. , vol.37 , pp. 986-990
    • Verstrepen, K.J.1    Jansen, A.2    Lewitter, F.3    Fink, G.R.4
  • 31
    • 66349113764 scopus 로고    scopus 로고
    • Unstable tandem repeats in promoters confer transcriptional evolvability
    • Vinces, M.D., M. Legendre, M. Caldara, et al 2009. Unstable tandem repeats in promoters confer transcriptional evolvability. Science 324: 1213-1216.
    • (2009) Science , vol.324 , pp. 1213-1216
    • Vinces, M.D.1    Legendre, M.2    Caldara, M.3
  • 32
    • 0001779824 scopus 로고    scopus 로고
    • Variation and fidelity: The evolution of simple sequence repeats as functional elements in adjustable genes
    • S.P. Wasser, Ed.: Kluwer Academic Publishers. Dordrecht, The Netherlands.
    • King, D.G. & M. Soller 1999. Variation and fidelity: The evolution of simple sequence repeats as functional elements in adjustable genes. In: Evolutionary Theory and Processes: Modern Perspectives. S.P. Wasser, Ed.: 65-82. Kluwer Academic Publishers. Dordrecht, The Netherlands
    • (1999) Evolutionary Theory and Processes: Modern Perspectives , pp. 65-82
    • King, D.G.1    Soller, M.2
  • 33
    • 33646128079 scopus 로고    scopus 로고
    • Tuning knobs in the genome: evolution of simple sequence repeats by indirect selection
    • In: Lynn H. Caporale, Ed.: Oxford University Press. New York.
    • King, D.G., E.N. Trifonov & Y. Kashi 2006. Tuning knobs in the genome: evolution of simple sequence repeats by indirect selection. In: The Implicit Genome. Lynn H. Caporale, Ed.: 77-90. Oxford University Press. New York
    • (2006) The Implicit Genome , pp. 77-90
    • King, D.G.1    Trifonov, E.N.2    Kashi, Y.3
  • 34
    • 35549000153 scopus 로고    scopus 로고
    • Has simple sequence repeat mutability been selected to facilitate evolution?
    • Kashi, Y. & D.G. King 2006. Has simple sequence repeat mutability been selected to facilitate evolution? Isr. J. Ecol. Evol. 52: 331-342.
    • (2006) Isr. J. Ecol. Evol. , vol.52 , pp. 331-342
    • Kashi, Y.1    King, D.G.2
  • 35
    • 34547208016 scopus 로고    scopus 로고
    • Indirect selection for mutability
    • King, D.G. & Y. Kashi 2007. Indirect selection for mutability. Heredity 99: 123-124.
    • (2007) Heredity , vol.99 , pp. 123-124
    • King, D.G.1    Kashi, Y.2
  • 36
    • 33749991391 scopus 로고    scopus 로고
    • The rise, fall and renaissance of microsatellites in eukaryotic genomes
    • Buschiazzo, E. & N.J. Gemmel 2006. The rise, fall and renaissance of microsatellites in eukaryotic genomes. BioEssays 28: 1040-1050.
    • (2006) BioEssays , vol.28 , pp. 1040-1050
    • Buschiazzo, E.1    Gemmel, N.J.2
  • 37
    • 84865981114 scopus 로고    scopus 로고
    • Evolution of simple sequence repeat-mediated phase variation in bacterial genomes
    • This volume.
    • Bayliss, C.D. & M.E. Palmer 2012. Evolution of simple sequence repeat-mediated phase variation in bacterial genomes. Ann. N.Y. Acad. Sci. 1267: 39-44. This volume.
    • (2012) Ann. N.Y. Acad. Sci. , vol.1267 , pp. 39-44
    • Bayliss, C.D.1    Palmer, M.E.2
  • 39
    • 0030003384 scopus 로고    scopus 로고
    • Microsatellite spreading in the human genome: evolutionary mechanisms and structural implications
    • Nadir, E., H. Margalit, T. Gallily & S.A. Ben-Sasson 1996. Microsatellite spreading in the human genome: evolutionary mechanisms and structural implications. Proc. Natl. Acad. Sci. USA 93: 6470-6475.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 6470-6475
    • Nadir, E.1    Margalit, H.2    Gallily, T.3    Ben-Sasson, S.A.4
  • 40
    • 0033084050 scopus 로고    scopus 로고
    • Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley
    • Ramsay, L., M. Macaulay, L. Cardle, et al 1999. Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley. Plant J. 17: 415-425.
    • (1999) Plant J , vol.17 , pp. 415-425
    • Ramsay, L.1    Macaulay, M.2    Cardle, L.3
  • 41
    • 33748936552 scopus 로고    scopus 로고
    • Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes
    • Volff, J.-N. 2006. Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes. BioEssays 28: 913-922.
    • (2006) BioEssays , vol.28 , pp. 913-922
    • Volff, J.-N.1
  • 43
    • 38549146025 scopus 로고    scopus 로고
    • Conserved eukaryotic transposable elements and the evolution of gene regulation
    • Jurka, J. 2007. Conserved eukaryotic transposable elements and the evolution of gene regulation. Cell. Mol. Life Sci. 65: 201-204.
    • (2007) Cell. Mol. Life Sci. , vol.65 , pp. 201-204
    • Jurka, J.1
  • 44
    • 70349339300 scopus 로고    scopus 로고
    • Transposable elements: powerful facilitators of evolution
    • Oliver, K.R. & W.K. Greene 2009. Transposable elements: powerful facilitators of evolution. BioEssays 31: 703-714.
    • (2009) BioEssays , vol.31 , pp. 703-714
    • Oliver, K.R.1    Greene, W.K.2
  • 45
    • 0004039907 scopus 로고    scopus 로고
    • 3rd ed. Sinauer Associates. Sunderland, Massachusetts.
    • Futuyma, D.J. 1998. Evolutionary Biology, 3rd ed.: 769. Sinauer Associates. Sunderland, Massachusetts
    • (1998) Evolutionary Biology , pp. 769
    • Futuyma, D.J.1
  • 46
    • 33845992556 scopus 로고    scopus 로고
    • Conus peptides: biodiversity-based discovery and exogenomics
    • Olivera, B.M. 2006. Conus peptides: biodiversity-based discovery and exogenomics. J. Biol. Chem. 281: 31173-31177.
    • (2006) J. Biol. Chem. , vol.281 , pp. 31173-31177
    • Olivera, B.M.1
  • 47
    • 84865971656 scopus 로고    scopus 로고
    • Adaptive radiation of venomous marine snail lineages and the accelerated evolution of venom peptide genes
    • This volume.
    • Olivera, B.M., M. Watkins, P. Bandyopadhyay, et al 2012. Adaptive radiation of venomous marine snail lineages and the accelerated evolution of venom peptide genes. Ann. N.Y. Acad. Sci. 1267: 61-70. This volume.
    • (2012) Ann. N.Y. Acad. Sci. , vol.1267 , pp. 61-70
    • Olivera, B.M.1    Watkins, M.2    Bandyopadhyay, P.3
  • 48
    • 77958130354 scopus 로고    scopus 로고
    • Gene copy-number polymorphism in nature
    • Schrider, D.R. & M.W. Hahn 2010. Gene copy-number polymorphism in nature. Proc. R. Sci. B. 277: 3213-3221.
    • (2010) Proc. R. Sci. B. , vol.277 , pp. 3213-3221
    • Schrider, D.R.1    Hahn, M.W.2
  • 50
    • 24744452988 scopus 로고    scopus 로고
    • Recombination and speciation
    • Butlin, R.K. 2005. Recombination and speciation. Molec. Ecol. 14: 2621-2635.
    • (2005) Molec. Ecol. , vol.14 , pp. 2621-2635
    • Butlin, R.K.1
  • 51
    • 81355138824 scopus 로고    scopus 로고
    • Recombination rate variation in closely related species
    • Smukowski, C.S. & M.A.F. Noor 2011. Recombination rate variation in closely related species. Heredity 107: 496-508.
    • (2011) Heredity , vol.107 , pp. 496-508
    • Smukowski, C.S.1    Noor, M.A.F.2
  • 52
    • 84860512528 scopus 로고    scopus 로고
    • Evidence of non-random mutation rates suggests an evolutionary risk management strategy
    • Martincorena, I., A.S.N. Seshasayee & N.M. Luscombe 2012. Evidence of non-random mutation rates suggests an evolutionary risk management strategy. Nature 485: 95-98.
    • (2012) Nature , vol.485 , pp. 95-98
    • Martincorena, I.1    Seshasayee, A.S.N.2    Luscombe, N.M.3
  • 53
    • 0019989720 scopus 로고
    • Darwinism and the expansion of evolutionary theory
    • Gould, S.J. 1982. Darwinism and the expansion of evolutionary theory. Science 216: 380-387.
    • (1982) Science , vol.216 , pp. 380-387
    • Gould, S.J.1
  • 54
    • 70349885478 scopus 로고    scopus 로고
    • Heretical DNA sequences?
    • King, D.G. & Y. Kashi 2009. Heretical DNA sequences? Science 326: 229-230.
    • (2009) Science , vol.326 , pp. 229-230
    • King, D.G.1    Kashi, Y.2
  • 55
    • 77952700703 scopus 로고    scopus 로고
    • Conservation of human microsatellites across 450 million years of evolution
    • Buschiazzo, E. & N.J. Gemmel 2010. Conservation of human microsatellites across 450 million years of evolution. Genome Biol. Evol 2: 153-165.
    • (2010) Genome Biol. Evol , vol.2 , pp. 153-165
    • Buschiazzo, E.1    Gemmel, N.J.2
  • 56
    • 56949101938 scopus 로고    scopus 로고
    • UTR dinucleotide simple sequence repeat evolution exhibits recurring patterns including regulatory sequence motif replacements
    • Riley, D.E. & J.N. Krieger 2009. UTR dinucleotide simple sequence repeat evolution exhibits recurring patterns including regulatory sequence motif replacements. Gene 429: 80-86.
    • (2009) Gene , vol.429 , pp. 80-86
    • Riley, D.E.1    Krieger, J.N.2
  • 57
    • 56949108250 scopus 로고    scopus 로고
    • Embryonic nervous system genes predominate in searches for dinucleotide simple sequence repeats flanked by conserved sequences
    • Riley, D.E. & J.N. Krieger 2009. Embryonic nervous system genes predominate in searches for dinucleotide simple sequence repeats flanked by conserved sequences. Gene 429: 74-79.
    • (2009) Gene , vol.429 , pp. 74-79
    • Riley, D.E.1    Krieger, J.N.2
  • 58
    • 33646156702 scopus 로고    scopus 로고
    • An engineering perspective: the implicit protocols
    • In. Lynn H. Caporale, Ed.: Oxford University Press. New York.
    • Doyle, J., M. Csete & L. Caporale 2006. An engineering perspective: the implicit protocols. In The Implicit Genome. Lynn H. Caporale, Ed.: pp. 294-298. Oxford University Press. New York
    • (2006) The Implicit Genome , pp. 294-298
    • Doyle, J.1    Csete, M.2    Caporale, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.