메뉴 건너뛰기




Volumn 9, Issue , 2012, Pages

Viral metagenomic analysis of bushpigs (Potamochoerus larvatus) in Uganda identifies novel variants of Porcine parvovirus 4 and Torque teno sus virus 1 and 2

Author keywords

[No Author keywords available]

Indexed keywords

AGRICULTURAL LAND; ARTICLE; BLOOD SAMPLING; ENDOGENOUS RETROVIRUS; HEPATITIS C VIRUS; METAGENOMICS; NATIONAL PARK; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PORCINE PARVOVIRUS; PORCINE PARVOVIRUS 4; POTAMOCHOERUS LARVATUS; PYROSEQUENCING; SCLEROTINIA; SWINE; TORQUE TENO SUS VIRUS 1; TORQUE TENO SUS VIRUS 2; TORQUE TENO VIRUS; UGANDA; UNINDEXED SEQUENCE; VIRUS IDENTIFICATION;

EID: 84865960969     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-9-192     Document Type: Article
Times cited : (25)

References (29)
  • 1
    • 84866363633 scopus 로고    scopus 로고
    • Livestock and Global Change Special Feature: Current drivers and future directions of global livestock disease dynamics
    • Livestock and Global Change Special Feature: Current drivers and future directions of global livestock disease dynamics. Perry BD, Grace D, Sones K, Proc Natl Acad Sci USA 2011
    • (2011) Proc Natl Acad Sci USA
    • Perry, B.D.1    Grace, D.2    Sones, K.3
  • 2
    • 0034695526 scopus 로고    scopus 로고
    • Emerging infectious diseases of wildlife-threats to biodiversity and human health
    • 10.1126/science.287.5452.443 10642539
    • Emerging infectious diseases of wildlife-threats to biodiversity and human health. Daszak P, Cunningham AA, Hyatt AD, Science 2000 287 443 449 10.1126/science.287.5452.443 10642539
    • (2000) Science , vol.287 , pp. 443-449
    • Daszak, P.1    Cunningham, A.A.2    Hyatt, A.D.3
  • 4
    • 83455228523 scopus 로고    scopus 로고
    • Viral metagenomics as an emerging and powerful tool in veterinary medicine
    • 10.1080/01652176.2011.604971 22029881
    • Viral metagenomics as an emerging and powerful tool in veterinary medicine. Blomström A-L, Vet Q 2011 31 107 114 10.1080/01652176.2011.604971 22029881
    • (2011) Vet Q , vol.31 , pp. 107-114
    • Blomström, A.-L.1
  • 5
    • 77951134860 scopus 로고    scopus 로고
    • Metagenomics for the discovery of novel human viruses
    • 10.2217/fmb.09.120 20143943
    • Metagenomics for the discovery of novel human viruses. Tang P, Chiu C, Future Microbiol 2010 5 177 189 10.2217/fmb.09.120 20143943
    • (2010) Future Microbiol , vol.5 , pp. 177-189
    • Tang, P.1    Chiu, C.2
  • 6
    • 33947607974 scopus 로고    scopus 로고
    • Viral metagenomics
    • DOI 10.1002/rmv.532
    • Viral metagenomics. Delwart EL, Rev Med Virol 2007 17 115 131 10.1002/rmv.532 17295196 (Pubitemid 46480595)
    • (2007) Reviews in Medical Virology , vol.17 , Issue.2 , pp. 115-131
    • Delwart, E.L.1
  • 7
    • 77951025337 scopus 로고    scopus 로고
    • Role of wild suids in the epidemiology of African swine fever
    • 10.1007/s10393-009-0248-7 19915917
    • Role of wild suids in the epidemiology of African swine fever. Jori F, Bastos AD, EcoHealth 2009 6 296 310 10.1007/s10393-009-0248-7 19915917
    • (2009) EcoHealth , vol.6 , pp. 296-310
    • Jori, F.1    Bastos, A.D.2
  • 8
    • 0042195112 scopus 로고    scopus 로고
    • Parvovirus host range, cell tropism and evolution
    • DOI 10.1016/S1369-5274(03)00083-3
    • Parvovirus host range, cell tropism and evolution. Hueffer K, Parrish CR, Curr Opin Microbiol 2003 6 392 398 10.1016/S1369-5274(03)00083-3 12941411 (Pubitemid 37075359)
    • (2003) Current Opinion in Microbiology , vol.6 , Issue.4 , pp. 392-398
    • Hueffer, K.1    Parrish, C.R.2
  • 9
    • 0034596118 scopus 로고    scopus 로고
    • The effect of porcine parvovirus and porcine reproductive and respiratory syndrome virus on porcine reproductive performance
    • DOI 10.1016/S0378-4320(00)00135-4, PII S0378432000001354
    • The effect of porcine parvovirus and porcine reproductive and respiratory syndrome virus on porcine reproductive performance. Mengeling WL, Lager KM, Vorwald AC, Anim Reprod Sci 2000 60-61 199 210 22921266 (Pubitemid 30397793)
    • (2000) Animal Reproduction Science , vol.60-61 , pp. 199-210
    • Mengeling, W.L.1    Lager, K.M.2    Vorwald, A.C.3
  • 10
    • 50549098375 scopus 로고    scopus 로고
    • Identification of novel porcine and bovine parvoviruses closely related to human parvovirus 4
    • 10.1099/vir.0.2008/000380-0 18632954
    • Identification of novel porcine and bovine parvoviruses closely related to human parvovirus 4. Lau SK, Woo PC, Tse H, Fu CT, Au WK, Chen XC, Tsoi HW, Tsang TH, Chan JS, Tsang DN, et al. J Gen Virol 2008 89 1840 1848 10.1099/vir.0.2008/000380-0 18632954
    • (2008) J Gen Virol , vol.89 , pp. 1840-1848
    • Lau, S.K.1    Woo, P.C.2    Tse, H.3    Fu, C.T.4    Au, W.K.5    Chen, X.C.6    Tsoi, H.W.7    Tsang, T.H.8    Chan, J.S.9    Tsang, D.N.10
  • 11
    • 70350241322 scopus 로고    scopus 로고
    • Detection of a novel porcine boca-like virus in the background of porcine circovirus type 2 induced postweaning multisystemic wasting syndrome
    • 10.1016/j.virusres.2009.09.006 19748534
    • Detection of a novel porcine boca-like virus in the background of porcine circovirus type 2 induced postweaning multisystemic wasting syndrome. Blomström AL, Belak S, Fossum C, McKillen J, Allan G, Wallgren P, Berg M, Virus Res 2009 146 125 129 10.1016/j.virusres.2009.09.006 19748534
    • (2009) Virus Res , vol.146 , pp. 125-129
    • Blomström, A.L.1    Belak, S.2    Fossum, C.3    McKillen, J.4    Allan, G.5    Wallgren, P.6    Berg, M.7
  • 12
    • 77951976293 scopus 로고    scopus 로고
    • Identification and molecular cloning of a novel porcine parvovirus
    • 10.1007/s00705-010-0646-8 20339886
    • Identification and molecular cloning of a novel porcine parvovirus. Cheung AK, Wu G, Wang D, Bayles DO, Lager KM, Vincent AL, Arch Virol 2010 155 801 806 10.1007/s00705-010-0646-8 20339886
    • (2010) Arch Virol , vol.155 , pp. 801-806
    • Cheung, A.K.1    Wu, G.2    Wang, D.3    Bayles, D.O.4    Lager, K.M.5    Vincent, A.L.6
  • 13
    • 78449254394 scopus 로고    scopus 로고
    • Detection of a novel porcine parvovirus, PPV4, in Chinese swine herds
    • 10.1186/1743-422X-7-333 21092136
    • Detection of a novel porcine parvovirus, PPV4, in Chinese swine herds. Huang L, Zhai SL, Cheung AK, Zhang HB, Long JX, Yuan SS, Virol J 2010 7 333 10.1186/1743-422X-7-333 21092136
    • (2010) Virol J , vol.7 , pp. 333
    • Huang, L.1    Zhai, S.L.2    Cheung, A.K.3    Zhang, H.B.4    Long, J.X.5    Yuan, S.S.6
  • 14
  • 15
    • 58349104793 scopus 로고    scopus 로고
    • TT viruses in animals
    • 10.1007/978-3-540-70972-5-3 19230556
    • TT viruses in animals. Okamoto H, Curr Top Microbiol Immunol 2009 331 35 52 10.1007/978-3-540-70972-5-3 19230556
    • (2009) Curr Top Microbiol Immunol , vol.331 , pp. 35-52
    • Okamoto, H.1
  • 16
    • 77955278889 scopus 로고    scopus 로고
    • Studies of porcine circovirus type 2, porcine boca-like virus and torque teno virus indicate the presence of multiple viral infections in postweaning multisystemic wasting syndrome pigs
    • 10.1016/j.virusres.2010.06.004 20542066
    • Studies of porcine circovirus type 2, porcine boca-like virus and torque teno virus indicate the presence of multiple viral infections in postweaning multisystemic wasting syndrome pigs. Blomström AL, Belak S, Fossum C, Fuxler L, Wallgren P, Berg M, Virus Res 2010 152 59 64 10.1016/j.virusres.2010. 06.004 20542066
    • (2010) Virus Res , vol.152 , pp. 59-64
    • Blomström, A.L.1    Belak, S.2    Fossum, C.3    Fuxler, L.4    Wallgren, P.5    Berg, M.6
  • 17
    • 59049102112 scopus 로고    scopus 로고
    • Retrospective study on swine Torque teno virus genogroups 1 and 2 infection from 1985 to 2005 in Spain
    • 10.1016/j.vetmic.2008.08.002 18814975
    • Retrospective study on swine Torque teno virus genogroups 1 and 2 infection from 1985 to 2005 in Spain. Segales J, Martinez-Guino L, Cortey M, Navarro N, Huerta E, Sibila M, Pujols J, Kekarainen T, Vet Microbiol 2009 134 199 207 10.1016/j.vetmic.2008.08.002 18814975
    • (2009) Vet Microbiol , vol.134 , pp. 199-207
    • Segales, J.1    Martinez-Guino, L.2    Cortey, M.3    Navarro, N.4    Huerta, E.5    Sibila, M.6    Pujols, J.7    Kekarainen, T.8
  • 18
    • 84857020744 scopus 로고    scopus 로고
    • First time molecular detection and phylogenetic relationships of torque teno sus virus 1 and 2 in domestic pigs in Uganda: Further evidence for a global distribution
    • 10.1186/1743-422X-9-39 22336096
    • First time molecular detection and phylogenetic relationships of torque teno sus virus 1 and 2 in domestic pigs in Uganda: further evidence for a global distribution. Brink M, Stahl K, Masembe C, Okurut AR, Berg M, Blomstrom AL, Virol J 2012 9 39 10.1186/1743-422X-9-39 22336096
    • (2012) Virol J , vol.9 , pp. 39
    • Brink, M.1    Stahl, K.2    Masembe, C.3    Okurut, A.R.4    Berg, M.5    Blomstrom, A.L.6
  • 19
    • 33750972604 scopus 로고    scopus 로고
    • Torque teno virus (TTV) is highly prevalent in the European wild boar (Sus scrofa)
    • DOI 10.1016/j.vetmic.2006.07.022, PII S0378113506002951
    • Torque teno virus (TTV) is highly prevalent in the European wild boar (Sus scrofa). Martinez L, Kekarainen T, Sibila M, Ruiz-Fons F, Vidal D, Gortazar C, Segales J, Vet Microbiol 2006 118 223 229 10.1016/j.vetmic.2006.07.022 16959441 (Pubitemid 44750499)
    • (2006) Veterinary Microbiology , vol.118 , Issue.3-4 , pp. 223-229
    • Martinez, L.1    Kekarainen, T.2    Sibila, M.3    Ruiz-Fons, F.4    Vidal, D.5    Gortazar, C.6    Segales, J.7
  • 20
    • 79951579078 scopus 로고    scopus 로고
    • Genetic variability and phylogeny of Torque teno sus virus 1 (TTSuV1) and 2 (TTSuV2) based on complete genomes
    • 10.1016/j.vetmic.2010.08.013 20833485
    • Genetic variability and phylogeny of Torque teno sus virus 1 (TTSuV1) and 2 (TTSuV2) based on complete genomes. Cortey M, Macera L, Segales J, Kekarainen T, Vet Microbiol 2011 148 125 131 10.1016/j.vetmic.2010.08.013 20833485
    • (2011) Vet Microbiol , vol.148 , pp. 125-131
    • Cortey, M.1    MacEra, L.2    Segales, J.3    Kekarainen, T.4
  • 22
    • 79953071149 scopus 로고    scopus 로고
    • Distinctive differences in long terminal repeat sequences between gamma1 endogenous retroviruses of African and Eurasian suid species
    • 10.1016/j.meegid.2011.01.010 21256982
    • Distinctive differences in long terminal repeat sequences between gamma1 endogenous retroviruses of African and Eurasian suid species. Do Nascimento FF, Gongora J, Tristem M, Lowden S, Moran C, Infect Genet Evol 2011 11 686 693 10.1016/j.meegid.2011.01.010 21256982
    • (2011) Infect Genet Evol , vol.11 , pp. 686-693
    • Do Nascimento, F.F.1    Gongora, J.2    Tristem, M.3    Lowden, S.4    Moran, C.5
  • 23
    • 79956267317 scopus 로고    scopus 로고
    • Evolution of endogenous retroviruses in the Suidae: Evidence for different viral subpopulations in African and Eurasian host species
    • 10.1186/1471-2148-11-139 21609472
    • Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species. Do Nascimento FF, Gongora J, Charleston M, Tristem M, Lowden S, Moran C, BMC Evol Biol 2011 11 139 10.1186/1471-2148-11-139 21609472
    • (2011) BMC Evol Biol , vol.11 , pp. 139
    • Do Nascimento, F.F.1    Gongora, J.2    Charleston, M.3    Tristem, M.4    Lowden, S.5    Moran, C.6
  • 25
    • 78650057997 scopus 로고    scopus 로고
    • Detection of a novel astrovirus in brain tissue of mink suffering from shaking mink syndrome by use of viral metagenomics
    • 10.1128/JCM.01040-10 20926705
    • Detection of a novel astrovirus in brain tissue of mink suffering from shaking mink syndrome by use of viral metagenomics. Blomström AL, Widen F, Hammer AS, Belak S, Berg M, J Clin Microbiol 2010 48 4392 4396 10.1128/JCM.01040-10 20926705
    • (2010) J Clin Microbiol , vol.48 , pp. 4392-4396
    • Blomström, A.L.1    Widen, F.2    Hammer, A.S.3    Belak, S.4    Berg, M.5
  • 26
    • 33947215475 scopus 로고    scopus 로고
    • CAMERA: A community resource for metagenomics
    • DOI 10.1371/journal.pbio.0050075
    • CAMERA: a community resource for metagenomics. Seshadri R, Kravitz SA, Smarr L, Gilna P, Frazier M, PLoS Biol 2007 5 75 10.1371/journal.pbio.0050075 17355175 (Pubitemid 46422964)
    • (2007) PLoS Biology , vol.5 , Issue.3 , pp. 0394-0397
    • Seshadri, R.1    Kravitz, S.A.2    Smarr, L.3    Gilna, P.4    Frazier, M.5
  • 28
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Hall T, Nucleic Acids Symp Ser 1999 41 95 98
    • (1999) Nucleic Acids Symp ser , vol.41 , pp. 95-98
    • Hall, T.1
  • 29
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Tamura K, Dudley J, Nei M, Kumar S, Mol Biol Evol 2007 24 1596 1599 10.1093/molbev/msm092 17488738 (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.