-
1
-
-
0029146375
-
Expression of the nir and nor genes for denitrification of Pseudomonas aeruginosa requires a novel CRP/FNR-related transcriptional regulator, DNR, in addition to ANR
-
Arai H, Igarashi Y, and Kodama T. Expression of the nir and nor genes for denitrification of Pseudomonas aeruginosa requires a novel CRP/FNR-related transcriptional regulator, DNR, in addition to ANR. FEBS Lett 371:73-76, 1995.
-
(1995)
FEBS Lett
, vol.371
, pp. 73-76
-
-
Arai, H.1
Igarashi, Y.2
Kodama, T.3
-
2
-
-
0035798650
-
Fast coordination changes in cytochrome c do not necessarily imply folding
-
Arcovito A, Gianni S, Brunori M, Travaglini-Allocatelli C, and Bellelli A. Fast coordination changes in cytochrome c do not necessarily imply folding. J Biol Chem 276:41073-41078, 2001.
-
(2001)
J Biol Chem
, vol.276
, pp. 41073-41078
-
-
Arcovito, A.1
Gianni, S.2
Brunori, M.3
Travaglini-Allocatelli, C.4
Bellelli, A.5
-
3
-
-
44949254924
-
An X-ray diffraction and Xray absorption spectroscopy joint study of neuroglobin
-
Arcovito A, Moschetti T, D'Angelo P, Mancini G, Vallone B, Brunori M, and Della Longa S. An X-ray diffraction and Xray absorption spectroscopy joint study of neuroglobin. Arch Biochem Biophys 475:7-13, 2008.
-
(2008)
Arch Biochem Biophys
, vol.475
, pp. 7-13
-
-
Arcovito, A.1
Moschetti, T.2
D'Angelo, P.3
Mancini, G.4
Vallone, B.5
Brunori, M.6
Longa, S.D.7
-
4
-
-
33947313309
-
Structure-based hypothesis on the activation of the CO-sensing transcription factor CooA
-
DOI 10.1107/S0907444906051638, PII S0907444906051638
-
Borjigin M, Li H, Lanz ND, Kerby RL, Roberts GP, and Poulos TL. Structure-based hypothesis on the activation of the CO-sensing transcription factor CooA. Acta Crystallogr D Biol Crystallogr 63:282-287, 2007. (Pubitemid 46438520)
-
(2007)
Acta Crystallographica Section D: Biological Crystallography
, vol.63
, Issue.3
, pp. 282-287
-
-
Borjigin, M.1
Li, H.2
Lanz, N.D.3
Kerby, R.L.4
Roberts, G.P.5
Poulos, T.L.6
-
5
-
-
69949151824
-
The transcription factor DNR from Pseudomonas aeruginosa specifically requires nitric oxide and haem for the activation of a target promoter in Escherichia coli
-
Castiglione N, Rinaldo S, Giardina G, and Cutruzzolà F. The transcription factor DNR from Pseudomonas aeruginosa specifically requires nitric oxide and haem for the activation of a target promoter in Escherichia coli. Microbiology 155:2838-2844, 2009.
-
(2009)
Microbiology
, vol.155
, pp. 2838-2844
-
-
Castiglione, N.1
Rinaldo, S.2
Giardina, G.3
Cutruzzolà, F.4
-
6
-
-
33751337777
-
Insight into heme protein redox potential control and functional aspects of six-coordinate ligand-sensing heme proteins from studies of synthetic heme peptides
-
Cowley AB, Kennedy ML, Silchenko S, Lukat-Rodgers GS, Rodgers KR, and Benson DR. Insight into heme protein redox potential control and functional aspects of six-coordinate ligand-sensing heme proteins from studies of synthetic heme peptides. Inorg Chem 45:9985-10001, 2006.
-
(2006)
Inorg Chem
, vol.45
, pp. 9985-10001
-
-
Cowley, A.B.1
Kennedy, M.L.2
Silchenko, S.3
Lukat-Rodgers, G.S.4
Rodgers, K.R.5
Benson, D.R.6
-
7
-
-
0033438291
-
Polarized X-ray absorption spectroscopy of the low-temperature photoproduct of carbonmonoxy-myoglobin
-
Della Longa S, Arcovito A, Vallone B, Congiu Castellano A, Soldo Y, and Hazemann JL. Polarized x-ray absorption spectroscopy (P-XAS) of photolyzed carbonmonoxymyoglobin. J Synchr Rad 6:1138-1147, 1999. (Pubitemid 129489154)
-
(1999)
Journal of Synchrotron Radiation
, vol.6
, Issue.6
, pp. 1138-1147
-
-
Della Longa, S.1
Arcovito, A.2
Vallone, B.3
Congiu Castellano, A.4
Kahn, R.5
Vicat, J.6
Soldo, Y.7
Hazemann, J.L.8
-
8
-
-
0027333489
-
An x-ray absorption near edge structure spectroscopy study of metal coordination in Co (II)-substituted Carcinus maenas hemocyanin
-
Della Longa S, Bianconi A, Palladino L, Simonelli B, Congiu Castellano A, Borghi E, Barteri M, Beltramini M, Rocco GP, Salvato B, Bubacco L, Magliozzo RS, and Peisach J. An x-ray absorption near edge structure spectroscopy study of metal coordination in Co (II)-substituted Carcinus maenas hemocyanin. Biophys J 65:2680-2691, 1993.
-
(1993)
Biophys J
, vol.65
, pp. 2680-2691
-
-
Della Longa, S.1
Bianconi, A.2
Palladino, L.3
Simonelli, B.4
Congiu Castellano, A.5
Borghi, E.6
Barteri, M.7
Beltramini, M.8
Rocco, G.P.9
Salvato, B.10
Bubacco, L.11
Magliozzo, R.S.12
Peisach, J.13
-
9
-
-
77957325735
-
Reconstruction of the core and extended regulons of global transcription factors
-
Dufour YS, Kiley PJ, and Donohue TJ. Reconstruction of the core and extended regulons of global transcription factors. PLoS Genet 6:e1001027, 2010.
-
(2010)
PLoS Genet
, vol.6
-
-
Dufour, Y.S.1
Kiley, P.J.2
Donohue, T.J.3
-
10
-
-
17144398027
-
The mutation G145S in PrfA, a key virulence regulator of Listeria monocytogenes, increases DNA-binding affinity by stabilizing the HTH motif
-
DOI 10.1111/j.1365-2958.2005.04561.x
-
Eiting M, Hagelüken G, Schubert WD, and Heinz DW. The mutation G145S in PrfA, a key virulence regulator of Listeria monocytogenes, increases DNA-binding affinity by stabilizing the HTH motif. Mol Microbiol 56:433-446, 2005. (Pubitemid 40516782)
-
(2005)
Molecular Microbiology
, vol.56
, Issue.2
, pp. 433-446
-
-
Eiting, M.1
Hageluken, G.2
Schubert, W.-D.3
Heinz, D.W.4
-
11
-
-
67649745795
-
Profound asymmetry in the structure of the cAMP-free cAMP Receptor Protein (CRP) from Mycobacterium tuberculosis
-
Gallagher D, Smith N, Kim S, Robinson H, and Reddy P. Profound asymmetry in the structure of the cAMP-free cAMP Receptor Protein (CRP) from Mycobacterium tuberculosis. J Biol Chem 284:8228-8232, 2009.
-
(2009)
J Biol Chem
, vol.284
, pp. 8228-8232
-
-
Gallagher, D.1
Smith, N.2
Kim, S.3
Robinson, H.4
Reddy, P.5
-
12
-
-
70349334424
-
A dramatic conformational rearrangement is necessary for the activation of DNR from Pseudomonas aeruginosa. Crystal structure of wild-type DNR
-
Giardina G, Rinaldo S, Castiglione N, Caruso M, and Cutruzzolà F. A dramatic conformational rearrangement is necessary for the activation of DNR from Pseudomonas aeruginosa. Crystal structure of wild-type DNR. Proteins 77:174-180, 2009.
-
(2009)
Proteins
, vol.77
, pp. 174-180
-
-
Giardina, G.1
Rinaldo, S.2
Castiglione, N.3
Caruso, M.4
Cutruzzolà, F.5
-
13
-
-
42649125235
-
NO sensing in Pseudomonas aeruginosa: Structure of the transcriptional regulator DNR
-
Giardina G, Rinaldo S, Johnson KA, Di Matteo A, Brunori M, and Cutruzzolà F. NO sensing in Pseudomonas aeruginosa: structure of the transcriptional regulator DNR. J Mol Biol 378:1002-1015, 2008.
-
(2008)
J Mol Biol
, vol.378
, pp. 1002-1015
-
-
Giardina, G.1
Rinaldo, S.2
Johnson, K.A.3
Di Matteo, A.4
Brunori, M.5
Cutruzzolà, F.6
-
14
-
-
0023042546
-
A kinetic description of ligand binding to sperm whale myoglobin
-
Gibson QH, Olson JS, McKinnie RE, and Rohlfs RJ. A kinetic description of ligand binding to sperm whale myoglobin. J Biol Chem 261:10228-10239, 1986.
-
(1986)
J Biol Chem
, vol.261
, pp. 10228-10239
-
-
Gibson, Q.H.1
Olson, J.S.2
McKinnie, R.E.3
Rohlfs, R.J.4
-
15
-
-
10444268892
-
Heme-based sensors: Defining characteristics, recent developments, and regulatory hypotheses
-
DOI 10.1016/j.jinorgbio.2004.11.006, PII S0162013404003502, Heme-Diatomic Interactions, Part 1
-
Gilles-Gonzalez MA and Gonzalez G. Heme-based sensors: defining characteristics, recent developments, and regulatory hypotheses. J Inorg Biochem 99:1-22, 2005. (Pubitemid 39642968)
-
(2005)
Journal of Inorganic Biochemistry
, vol.99
, Issue.1
, pp. 1-22
-
-
Gilles-Gonzalez, M.-A.1
Gonzalez, G.2
-
16
-
-
70350457954
-
Cyclic-di-GMP-binding CRP-like protein: A spectacular new role for a veteran signal transduction actor
-
Gomelsky M. Cyclic-di-GMP-binding CRP-like protein: A spectacular new role for a veteran signal transduction actor. J Bacteriol 191:6785-6787, 2009.
-
(2009)
J Bacteriol
, vol.191
, pp. 6785-6787
-
-
Gomelsky, M.1
-
17
-
-
0034982114
-
Functional versatility in the CRP-FNR superfamily of transcription factors: FNR and FLP
-
DOI 10.1016/S0065-2911(01)44010-0
-
Green J, Scott C, and Guest JR. Functional versatility in the CRP-FNR superfamily of transcription factors: FNR and FLP. Adv Microb Physiol 44:1-34, 2001. (Pubitemid 32500109)
-
(2001)
Advances in Microbial Physiology
, vol.44
, pp. 1-34
-
-
Green, J.1
Scott, C.2
Guest, J.R.3
-
18
-
-
6444245155
-
Anaerobic metabolism and quorum sensing by Pseudomonas aeruginosa biofilms in chronically infected cystic fibrosis airways: Rethinking antibiotic treatment strategies and drug targets
-
DOI 10.1016/S0169-409X(02)00152-7, PII S0169409X02001527
-
Hassett DJ, Cuppoletti J, Trapnell B, Lymar SV, Rowe JJ, Yoon SS, Hilliard GM, Parvatiyar K, Kamani MC, Wozniak DJ, Hwang SH, McDermott TR, and Ochsner UA. Anaerobic metabolism and quorum sensing by Pseudomonas aeruginosa biofilms in chronically infected cystic fibrosis airways: rethinking antibiotic treatment strategies and drug targets. Adv Drug Deliv Rev 54:1425-1443, 2002. (Pubitemid 35375769)
-
(2002)
Advanced Drug Delivery Reviews
, vol.54
, Issue.11
, pp. 1425-1443
-
-
Hassett, D.J.1
Cuppoletti, J.2
Trapnell, B.3
Lymar, S.V.4
Rowe, J.J.5
Yoon, S.S.6
Hilliard, G.M.7
Parvatiyar, K.8
Kamani, M.C.9
Wozniak, D.J.10
Hwang, S.-H.11
McDermott, T.R.12
Ochsner, U.A.13
-
19
-
-
79251600033
-
Hemebinding characteristics of the isolated PAS-B domain of mouse Per2, a transcriptional regulatory factor associated with circadian rhythms
-
Hayasaka K, Kitanishi K, Igarashi J, and Shimizu T. Hemebinding characteristics of the isolated PAS-B domain of mouse Per2, a transcriptional regulatory factor associated with circadian rhythms. Biochim Biophys Acta 1814:326-333, 2011.
-
(2011)
Biochim Biophys Acta
, vol.1814
, pp. 326-333
-
-
Hayasaka, K.1
Kitanishi, K.2
Igarashi, J.3
Shimizu, T.4
-
20
-
-
0015223110
-
Origin of the heme Cotton effects in myoglobin and hemoglobin
-
Hsu MC and Wood RW. Origin of the heme Cotton effects in myoglobin and hemoglobin. J Am Chem Soc 93:3515-3525, 1971.
-
(1971)
J Am Chem Soc
, vol.93
, pp. 3515-3525
-
-
Hsu, M.C.1
Wood, R.W.2
-
21
-
-
49649105752
-
Elucidation of the heme binding site of heme-regulated eukaryotic initiation factor 2alpha kinase and the role of the regulatory motif in heme sensing by spectroscopic and catalytic studies of mutant proteins
-
Igarashi J, Murase M, Iizuka A, Pichierri F, Martinkova M, and Shimizu T. Elucidation of the heme binding site of heme-regulated eukaryotic initiation factor 2alpha kinase and the role of the regulatory motif in heme sensing by spectroscopic and catalytic studies of mutant proteins. J Biol Chem 283:18782-18791, 2008.
-
(2008)
J Biol Chem
, vol.283
, pp. 18782-18791
-
-
Igarashi, J.1
Murase, M.2
Iizuka, A.3
Pichierri, F.4
Martinkova, M.5
Shimizu, T.6
-
22
-
-
13644262078
-
Spectroscopic and redox properties of a CooA homologue from Carboxydothermus hydrogenoformans
-
DOI 10.1074/jbc.M409884200
-
Inagaki S, Masuda C, Akaishi T, Nakajima H, Yoshioka S, Ohta T, Pal B, Kitagawa T, and Aono S. Spectroscopic and redox properties of a CooA homologue from Carboxydothermus hydrogenoformans. J Biol Chem 280:3269-3274, 2005. (Pubitemid 40227482)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.5
, pp. 3269-3274
-
-
Inagaki, S.1
Masuda, C.2
Akaishi, T.3
Nakajima, H.4
Yoshioka, S.5
Ohta, T.6
Pal, B.7
Kitagawa, T.8
Aono, S.9
-
23
-
-
50149095403
-
Arg97 at the heme-distal side of the isolated hemebound PAS domain of a heme-based oxygen sensor from Escherichia coli (Ec DOS) plays critical roles in autoxidation and binding to gases, particularly O2
-
Ishitsuka Y, Araki Y, Tanaka A, Igarashi J, Ito O, and Shimizu T. Arg97 at the heme-distal side of the isolated hemebound PAS domain of a heme-based oxygen sensor from Escherichia coli (Ec DOS) plays critical roles in autoxidation and binding to gases, particularly O2. Biochemistry 47:8874-8884, 2008.
-
(2008)
Biochemistry
, vol.47
, pp. 8874-8884
-
-
Ishitsuka, Y.1
Araki, Y.2
Tanaka, A.3
Igarashi, J.4
Ito, O.5
Shimizu, T.6
-
24
-
-
40449130769
-
Evolution of allostery in the cyclic nucleotide binding module
-
Kannan N, Wu J, Anand GS, Yooseph S, Neuwald AF, Venter JC, and Taylor SS. Evolution of allostery in the cyclic nucleotide binding module. Genome Biol 8:R264, 2007.
-
(2007)
Genome Biol
, vol.8
-
-
Kannan, N.1
Wu, J.2
Anand, G.S.3
Yooseph, S.4
Neuwald, A.F.5
Venter, J.C.6
Taylor, S.S.7
-
25
-
-
0031006612
-
Kinetics of nitric oxide dissociation from five- and six-coordinate nitrosyl hemes and heme proteins, including soluble guanylate cyclase
-
DOI 10.1021/bi970201o
-
Kharitonov VG, Sharma VS, Magde D, and Koesling D. Kinetics of nitric oxide dissociation from five-and six-coordinate nitrosyl hemes and heme proteins, including soluble guanylate cyclase. Biochemistry 36:6814-6818, 1997. (Pubitemid 27242342)
-
(1997)
Biochemistry
, vol.36
, Issue.22
, pp. 6814-6818
-
-
Kharitonov, V.G.1
Sharma, V.S.2
Magde, D.3
Koesling, D.4
-
26
-
-
44949200347
-
Heme-binding characteristics of the isolated PAS-A domain of mouse Per2, a transcriptional regulatory factor associated with circadian rhythms
-
DOI 10.1021/bi7023892
-
Kitanishi K, Igarashi J, Hayasaka K, Hikage N, Saiful I, Yamauchi S, Uchida T, Ishimori K, and Shimizu T. Hemebinding characteristics of the isolated PAS-A domain of mouse Per2, a transcriptional regulatory factor associated with circadian rhythms. Biochemistry 47:6157-6168, 2008. (Pubitemid 351812828)
-
(2008)
Biochemistry
, vol.47
, Issue.23
, pp. 6157-6168
-
-
Kitanishi, K.1
Igarashi, J.2
Hayasaka, K.3
Hikage, N.4
Saiful, I.5
Yamauchi, S.6
Uchida, T.7
Ishimori, K.8
Shimizu, T.9
-
27
-
-
0344153756
-
Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: Exploiting the metabolic spectrum by controlling alternative gene programs
-
DOI 10.1016/S0168-6445(03)00066-4
-
Körner H, Sofia HJ, and Zumft WG. Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. FEMS Microbiol Rev 27:559-592, 2003. (Pubitemid 37456858)
-
(2003)
FEMS Microbiology Reviews
, vol.27
, Issue.5
, pp. 559-592
-
-
Korner, H.1
Sofia, H.J.2
Zumft, W.G.3
-
28
-
-
1342345189
-
Catabolite activator protein: DNA binding and transcription activation
-
DOI 10.1016/j.sbi.2004.01.012
-
Lawson C, Swigon D, Murakami K, Darst S, Berman H, and Ebright R. Catabolite activator protein: DNA binding and transcription activation. Curr Opin Struct Biol 14:10-20, 2004. (Pubitemid 38249587)
-
(2004)
Current Opinion in Structural Biology
, vol.14
, Issue.1
, pp. 10-20
-
-
Lawson, C.L.1
Swigon, D.2
Murakami, K.S.3
Darst, S.A.4
Berman, H.M.5
Ebright, R.H.6
-
29
-
-
67650458070
-
Guanidine hydrochloride-induced unfolding of the three heme coordination states of the CO-sensing transcription factor, CooA
-
Lee AJ, Clark RW, Youn H, Ponter S, and Burstyn JN. Guanidine hydrochloride-induced unfolding of the three heme coordination states of the CO-sensing transcription factor, CooA. Biochemistry 48:6585-6597, 2009.
-
(2009)
Biochemistry
, vol.48
, pp. 6585-6597
-
-
Lee, A.J.1
Clark, R.W.2
Youn, H.3
Ponter, S.4
Burstyn, J.N.5
-
30
-
-
33646765404
-
* alleles encoding effectorindependent proteins and evidence for a haem-based sensing mechanism
-
* alleles encoding effectorindependent proteins and evidence for a haem-based sensing mechanism. Microbiology 152:1461-1470, 2006.
-
(2006)
Microbiology
, vol.152
, pp. 1461-1470
-
-
Lee, Y.Y.1
Shearer, N.2
Spiro, S.3
-
31
-
-
51649098521
-
Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator
-
Levy C, Pike K, Heyes DJ, Joyce MG, Gabor K, Smidt H, Van der Oost J, and Leys D. Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator. Mol Microbiol 70:151-167, 2008.
-
(2008)
Mol Microbiol
, vol.70
, pp. 151-167
-
-
Levy, C.1
Pike, K.2
Heyes, D.J.3
Joyce, M.G.4
Gabor, K.5
Smidt, H.6
Van Der Oost, J.7
Leys, D.8
-
32
-
-
0032078948
-
Transcription activation by Escherichia coli FNR protein: Similarities to, and differences from, the CRP paradigm
-
DOI 10.1093/nar/26.9.2075
-
Li B, Wing H, Lee D, Wu H, and Busby S. Transcription activation by Escherichia coli FNR protein: similarities to, and differences from, the CRP paradigm. Nucleic Acids Res 26:2075-2081, 1998. (Pubitemid 28291748)
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.9
, pp. 2075-2081
-
-
Li, B.1
Wing, H.2
Lee, D.3
Wu, H.-C.4
Busby, S.5
-
33
-
-
79952107782
-
Structural analysis of heme proteins: Implications for design and prediction
-
Li T, Bonkovsky H, and Guo J. Structural analysis of heme proteins: implications for design and prediction. BMC Struct Biol 11-13, 2011.
-
(2011)
BMC Struct Biol
, pp. 11-13
-
-
Li, T.1
Bonkovsky, H.2
Guo, J.3
-
34
-
-
0028773015
-
Crystal structure of chloroplast cytochrome f reveals a novel cytochrome fold and unexpected heme ligation
-
Martinez SE, Huang D, Szczepaniak A, Cramer WA, and Smith JL. Crystal structure of chloroplast cytochrome f reveals a novel cytochrome fold and unexpected heme ligation. Structure 2:95-105, 1994. (Pubitemid 124002012)
-
(1994)
Structure
, vol.2
, Issue.2
, pp. 95-105
-
-
Martinez, S.E.1
Huang, D.2
Szczepaniak, A.3
Cramer, W.A.4
Smith, J.L.5
-
35
-
-
0019463941
-
Structure of catabolite gene activator protein at 2.9 A resolution suggests binding to left-handed B-DNA
-
DOI 10.1038/290744a0
-
McKay DB and Steitz TA. Structure of catabolite gene activator protein at 2.9 A resolution suggests binding to lefthanded B-DNA. Nature 290:744-749, 1981. (Pubitemid 11068041)
-
(1981)
Nature
, vol.290
, Issue.5809
, pp. 744-749
-
-
McKay, D.B.1
Steitz, T.A.2
-
36
-
-
0003785155
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Miller JH. Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 1972, pp. 352-355.
-
(1972)
Experiments in Molecular Genetics
, pp. 352-355
-
-
Miller, J.H.1
-
37
-
-
61349184546
-
The structural basis of gasresponsive transcription by the human nuclear hormone receptor REV-ERBbeta
-
Pardee K, Xu X, Reinking J, Schuetz A, Dong A, Liu S, Zhang R, Tiefenbach J, Lajoie G, Plotnikov A, Botchkarev A, Krause H, and Edwards A. The structural basis of gasresponsive transcription by the human nuclear hormone receptor REV-ERBbeta. PLoS Biol 7:e43, 2009.
-
(2009)
PLoS Biol
, vol.7
-
-
Pardee, K.1
Xu, X.2
Reinking, J.3
Schuetz, A.4
Dong, A.5
Liu, S.6
Zhang, R.7
Tiefenbach, J.8
Lajoie, G.9
Plotnikov, A.10
Botchkarev, A.11
Krause, H.12
Edwards, A.13
-
38
-
-
0029740167
-
Aromatic hydrogen bond in sequence-specific protein DNA recognition
-
DOI 10.1038/nsb1096-837
-
Parkinson G, Gunasekera A, Vojtechovsky J, Zhang X, Kunkel TA, Berman H, and Ebright RH. Aromatic hydrogen bond in sequence-specific protein DNA recognition. Nat Struct Biol 3:837-841, 1996. (Pubitemid 26330632)
-
(1996)
Nature Structural Biology
, vol.3
, Issue.10
, pp. 837-841
-
-
Parkinson, G.1
Gunasekera, A.2
Vojtechovsky, J.3
Zhang, X.4
Kunkel, T.A.5
Berman, H.6
Ebright, R.H.7
-
39
-
-
66349083528
-
Structural basis for cAMP-mediated allosteric control of the catabolite activator protein
-
Popovych N, Tzeng SR, Tonelli M, Ebright RH, and Kalodimos CG. Structural basis for cAMP-mediated allosteric control of the catabolite activator protein. Proc Natl Acad Sci U S A 106:6927-6932, 2009.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 6927-6932
-
-
Popovych, N.1
Tzeng, S.R.2
Tonelli, M.3
Ebright, R.H.4
Kalodimos, C.G.5
-
40
-
-
79952812426
-
Unusual heme-binding PAS domain from YybT family proteins
-
Rao F, Ji Q, Soehano I, and Liang Z. Unusual heme-binding PAS domain from YybT family proteins. J Bacteriol 193:1543-1551, 2011.
-
(2011)
J Bacteriol
, vol.193
, pp. 1543-1551
-
-
Rao, F.1
Ji, Q.2
Soehano, I.3
Liang, Z.4
-
41
-
-
14644401763
-
N-oxide sensing in Pseudomonas aeruginosa: Expression and preliminary characterization of DNR, an FNR-CRP type transcriptional regulator
-
DOI 10.1042/BST0330184
-
Rinaldo S, Giardina G, Brunori M, and Cutruzzola F. N-oxide sensing in Pseudomonas aeruginosa: expression and preliminary characterization of DNR, an FNR-CRP type transcriptional regulator. Biochem Soc Trans 33:184-186, 2005. (Pubitemid 40313796)
-
(2005)
Biochemical Society Transactions
, vol.33
, Issue.1
, pp. 184-186
-
-
Rinaldo, S.1
Giardina, G.2
Brunori, M.3
Cutruzzola, F.4
-
42
-
-
10444220187
-
CooA, a paradigm for gas sensing regulatory proteins
-
DOI 10.1016/j.jinorgbio.2004.10.032, PII S0162013404003393, Heme-Diatomic Interactions, Part 1
-
Roberts GP, Kerby RL, Youn H, and Conrad M. CooA, a paradigm for gas sensing regulatory proteins. J Inorg Biochem 99:280-292, 2005. (Pubitemid 39642982)
-
(2005)
Journal of Inorganic Biochemistry
, vol.99
, Issue.1
, pp. 280-292
-
-
Roberts, G.P.1
Kerby, R.L.2
Youn, H.3
Conrad, M.4
-
43
-
-
0042553279
-
Smoothing and differentiation of data by simplified least squares procedures
-
Savitzky A and Golay M J E. Smoothing and Differentiation of Data by Simplified Least Squares Procedures. Anal Chem 36:1627-1639, 1964.
-
(1964)
Anal Chem
, vol.36
, pp. 1627-1639
-
-
Savitzky, A.1
Golay, M.J.E.2
-
44
-
-
30744469606
-
Slow ligand binding kinetics dominate ferrous hexacoordinate hemoglobin reactivities and reveal differences between plants and other species
-
DOI 10.1021/bi051902l
-
Smagghe BJ, Sarath G, Ross E, Hilbert JL, and Hargrove MS. Slow ligand binding kinetics dominate ferrous hexacoordinate hemoglobin reactivities and reveal differences between plants and other species. Biochemistry 45:561-570, 2006. (Pubitemid 43100421)
-
(2006)
Biochemistry
, vol.45
, Issue.2
, pp. 561-570
-
-
Smagghe, B.J.1
Sarath, G.2
Ross, E.3
Hilbert, J.-L.4
Hargrove, M.S.5
-
45
-
-
75749117906
-
The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors
-
Tao F, He YW, Wu DH, Swarup S, and Zhang LH. The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors. J Bacteriol 192:1020-1029, 2010.
-
(2010)
J Bacteriol
, vol.192
, pp. 1020-1029
-
-
Tao, F.1
He, Y.W.2
Wu, D.H.3
Swarup, S.4
Zhang, L.H.5
-
46
-
-
70450191983
-
Dynamic activation of an allosteric regulatory protein
-
Tzeng SR and Kalodimos CG. Dynamic activation of an allosteric regulatory protein. Nature 462:368-372, 2009.
-
(2009)
Nature
, vol.462
, pp. 368-372
-
-
Tzeng, S.R.1
Kalodimos, C.G.2
-
47
-
-
34547631100
-
Nitrate sensing and metabolism modulate motility, biofilm formation, and virulence in Pseudomonas aeruginosa
-
DOI 10.1128/IAI.00201-07
-
Van Alst NE, Picardo KF, Iglewski BH, and Haidaris CG. Nitrate sensing and metabolism modulate motility, biofilm formation, and virulence in Pseudomonas aeruginosa. Infect Immun 75:3780-3790, 2007. (Pubitemid 47206275)
-
(2007)
Infection and Immunity
, vol.75
, Issue.8
, pp. 3780-3790
-
-
Van Alst, N.E.1
Picardo, K.F.2
Iglewski, B.H.3
Haidaris, C.G.4
-
48
-
-
0035091010
-
Nitric oxide signaling and transcriptional control of denitrification genes in Pseudomonas stutzeri
-
DOI 10.1128/JB.183.8.2516-2526.2001
-
Vollack KU and Zumft WG. Nitric oxide signaling and transcriptional control of denitrification genes in Pseudomonas stutzeri. J Bacteriol 183:2516-2526, 2001. (Pubitemid 32249760)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.8
, pp. 2516-2526
-
-
Vollack, K.-U.1
Zumft, W.G.2
-
49
-
-
69249241732
-
Structural overview on the allosteric activation of cyclic AMP receptor protein
-
Won H, Lee Y, Lee S, and Lee B. Structural overview on the allosteric activation of cyclic AMP receptor protein. Biochim Biophys Acta 1794:1299-1308, 2009.
-
(2009)
Biochim Biophys Acta
, vol.1794
, pp. 1299-1308
-
-
Won, H.1
Lee, Y.2
Lee, S.3
Lee, B.4
-
50
-
-
14844355242
-
Two heme binding sites are involved in the regulated degradation of the bacterial iron response regulator (Irr) protein
-
DOI 10.1074/jbc.M411664200
-
Yang J, Ishimori K, and O'Brian MR. Two heme binding sites are involved in the regulated degradation of the bacterial iron response regulator (Irr) protein. J Biol Chem 280:7671-7676, 2005. (Pubitemid 40352575)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.9
, pp. 7671-7676
-
-
Yang, J.1
Ishimori, K.2
O'Brian, M.R.3
-
51
-
-
76149085834
-
X-ray absorption spectroscopy
-
Yano J and Yachandra VK. X-ray absorption spectroscopy. Photosynth Res 102:241-254, 2009.
-
(2009)
Photosynth Res
, vol.102
, pp. 241-254
-
-
Yano, J.1
Yachandra, V.K.2
-
52
-
-
0347777343
-
Pseudomonas aeruginosa anaerobic respiration in biofilms: Relationships to cystic fibrosis pathogenesis
-
DOI 10.1016/S1534-5807(02)00295-2
-
Yoon SS, Hennigan RF, Hilliard GM, Ochsner UA, Parvatiyar K, Kamani MC, Allen HL, DeKievit TR, Gardner PR, Schwab U, Rowe JJ, Iglewski BH, McDermott TR, Mason RP, Wozniak DJ, Hancock RE, Parsek MR, Noah TL, Boucher RC, and Hassett DJ. Pseudomonas aeruginosa anaerobic respiration in biofilms: relationships to cystic fibrosis pathogenesis. Dev Cell 3:593-603, 2002. (Pubitemid 35252267)
-
(2002)
Developmental Cell
, vol.3
, Issue.4
, pp. 593-603
-
-
Yoon, S.S.1
Hennigan, R.F.2
Hilliard, G.M.3
Ochsner, U.A.4
Parvatiyar, K.5
Kamani, M.C.6
Allen, H.L.7
DeKievit, T.R.8
Gardner, P.R.9
Schwab, U.10
Rowe, J.J.11
Iglewski, B.H.12
McDermott, T.R.13
Mason, R.P.14
Wozniak, D.J.15
Hancock, R.E.W.16
Parsek, M.R.17
Noah, T.L.18
Boucher, R.C.19
Hassett, D.J.20
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