X-ray absorption spectroscopy

Photosynthesis Research

Volumn 102, Issue 2, 2009, Pages 241-254

  Yano, Junko ^a   Yachandra, Vittal K ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

EXAFS; Manganese cluster; Oxygen evolution; Photosystem II; Water oxidation; X ray dichroism; X ray spectroscopy; XANES

Indexed keywords

MANGANESE;

CHEMISTRY; CRYSTALLIZATION; METHODOLOGY; PHOTOSYSTEM II; QUANTUM THEORY; REVIEW; X RAY ABSORPTION SPECTROSCOPY;

CRYSTALLIZATION; MANGANESE; PHOTOSYSTEM II PROTEIN COMPLEX; QUANTUM THEORY; X-RAY ABSORPTION SPECTROSCOPY;

EID: 76149085834     PISSN: 01668595     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11120-009-9473-8     Document Type: Review

References (40)

1. Cinco RM, Robblee JH, Rompel A, Fernandez C, Yachandra VK, Sauer K, Klein MP (1998) Strontium EXAFS reveals the proximity of calcium to the manganese cluster of oxygen-evolving photosystem II. J Phys Chem B 102: 8248-8256.
2. Cinco RM, Rompel A, Visser H, Aromi G, Christou G, Sauer K, Klein MP, Yachandra VK (1999) Comparison of the manganese cluster in oxygen-evolving photosystem II with distorted cubane manganese compounds through X-ray absorption spectroscopy. Inorg Chem 38: 5988-5998.
3. Cinco RM, Holman KLM, Robblee JH, Yano J, Pizarro SA, Bellacchio E, Sauer K, Yachandra VK (2002) Calcium EXAFS establishes the Mn-Ca cluster in the oxygen-evolving complex of photosystem II. Biochemistry 41: 12928-12933.
4. 4Ca cluster of the oxygen-evolving complex determined using polarized strontium EXAFS of photosystem II membranes. Biochemistry 43: 13271-13282.
5. Corbett MC, Latimer MJ, Poulos TL, Sevrioukova IF, Hodgson KO, Hedman B (2007) Photoreduction of the active site of the metalloprotein putidaredoxin by synchrotron radiation. Acta Crystallogr Sect D 63: 951-960.
6. Dau H, Andrews JC, Roelofs TA, Latimer MJ, Liang W, Yachandra VK, Sauer K, Klein MP (1995) Structural consequences of ammonia binding to the manganese cluster of the photosynthetic oxygen-evolving complex: an X-ray absorption study of isotropic and oriented photosystem II particles. Biochemistry 34: 5274-5287.
7. Eisenberger P, Brown GS (1979) Study of disordered systems by EXAFS: limitations. Solid State Commun 29: 481-484.
8. Eisenberger P, Kincaid BM (1978) EXAFS: new horizons in structure determinations. Science 200: 1441-1447.
9. Flank AM, Weininger M, Mortenson LE, Cramer SP (1986) Single-crystal EXAFS of nitrogenase. J Am Chem Soc 108: 1049.
10. George GN, Prince RC, Cramer SP (1989) The manganese site of the photosynthetic water-splitting enzyme. Science 243: 789-791.
11. George GN, Cramer SP, Frey TG, Prince RC (1993) X-ray absorption spectroscopy of oriented cytochrome oxidase. Biochim Biophys Acta 1142: 240-252.
12. George GN, Pickering IJ, Kisker C (1999) X-ray absorption spectroscopy of chicken sulfite oxidase crystals. Inorg Chem 38: 2539.
13. 2 formation tracked by time-resolved X-ray experiments. Science 310: 1019-1021.
14. --reconstituted oxygen-evolving photosystem II: evidence from X-ray absorption spectroscopy at the Br K-edge. Biochemistry 45: 13101-13107.
15. Koningsberger DC, Prins R (eds) (1988) X-ray absorption: principles, applications, techniques of EXAFS, SEXAFS and XANES. Wiley, New York.
16. Latimer MJ, DeRose VJ, Mukerji I, Yachandra VK, Sauer K, Klein MP (1995) Evidence for the proximity of calcium to the manganese cluster of photosystem II: determination by X-ray absorption spectroscopy. Biochemistry 34: 10898-10909.
17. Lytle FW, Sayers DE, Stern EA (1989) Report of the international workshop on standards and criteria in X-ray absorption-spectroscopy (1988), Brookhaven National Laboratory. Physica B 158: 701-722.
18. 3 transition: implications for the mechanism of photosynthetic water oxidation. J Am Chem Soc 123: 7804-7820.
19. Mukerji I, Andrews JC, Derose VJ, Latimer MJ, Yachandra VK, Sauer K, Klein MP (1994) Orientation of the oxygen-evolving manganese complex in a photosystem-II membrane preparation: an X-ray-absorption spectroscopy study. Biochemistry 33: 9712-9721.
20. Penner-Hahn JE (1998) Structural characterization of the Mn site in the photosynthetic oxygen-evolving complex. Struct Bond 90: 1-36.
21. Pickering IJ, George GN (1995) Polarized X-ray-absorption spectroscopy of cupric chloride dihydrate. Inorg Chem 34: 3142-3152.
22. Pizarro SA, Glatzel P, Visser H, Robblee JH, Christou G, Bergmann U, Yachandra VK (2004) Mn oxidation states in tri- and tetra-nuclear Mn compounds structurally relevant to photosystem II: Mn K-edge X-ray absorption and Kβ X-ray emission spectroscopy studies. Phys Chem Chem Phys 6: 4864-4870.
23. 4Ca cluster in plant photosystem II membranes studied by polarized range-extended X-ray absorption spectroscopy. J Biol Chem 282: 7198-7208.
24. 4Ca cluster and the mechanism of photosynthetic water splitting. Proc Natl Acad Sci USA 105: 1879-1884.
25. Rehr JJ, Albers RC (2000) Theoretical approaches to X-ray absorption fine structure. Rev Mod Phys 72: 621-654.
26. Sauer K, Yano J, Yachandra VK (2008) X-ray spectroscopy of the photosynthetic oxygen-evolving complex. Coord Chem Rev 252: 318-335.
27. Sayers DE, Stern EA, Lytle F (1971) New technique for investigating noncrystalline structures: Fourier analysis of the extended X-ray-absorption fine structure. Phys Rev Lett 27: 1204-1207.
28. Scott RA, Eidsness MK (1988) The use of X-ray absorption spectroscopy for detection of metal-metal interactions. Application to copper-containing enzymes. Comments Inorg Chem 7: 235-267.
29. Scott RA, Hahn JE, Doniach S, Freeman HC, Hodgson KO (1982) Polarized X-ray absorption spectra of oriented plastocyanin single crystals. Investigation of methionine-copper coordination. J Am Chem Soc 104: 5364-5369.
30. Shulman RG, Yafet Y, Eisenberger P, Blumberg WE (1976) Observation and interpretation of X-ray absorption edges in iron compounds and proteins. Proc Natl Acad Sci USA 73: 1384-1388.
31. Teo BK (1986) EXAFS: basic principles and data analysis. Springer, Berlin.
32. Visser H, Anxolabehere-Mallart E, Bergmann U, Glatzel P, Robblee JH, Cramer SP, Girerd JJ, Sauer K, Klein MP, Yachandra VK (2001) Mn K-edge XANES and Kβ XES studies of two Mn-oxo binuclear complexes: investigation of three different oxidation states relevant to the oxygen-evolving complex of photosystem II. J Am Chem Soc 123: 7031-7039.
33. Yachandra VK (2005) The catalytic manganese-cluster: organization of the metal ions. In: Wydrzynski T, Satoh S (eds) Photosystem II: the light-driven water: plastoquinone oxidoreductase. Springer, Dordrecht, pp 235-260.
34. Yachandra VK, Sauer K, Klein MP (1996) Manganese cluster in photosynthesis: where plants oxidize water to dioxygen. Chem Rev 96: 2927-2950.
35. 4Ca cluster in photosystem II. Photosynth Res 92: 289-303.
36. 4Ca cluster from X-ray spectroscopy. Inorg Chem 47: 1711-1726.
37. 4Ca cluster. J Am Chem Soc 127: 14974-14975.
38. 4Ca complex in photosystem II crystals: a case study for metallo-protein X-ray crystallography. Proc Natl Acad Sci USA 102: 12047-12052.
39. 4Ca cluster. Science 314: 821-825.
40. Yano J, Robblee J, Pushkar Y, Marcus MA, Bendix J, Workman JM, Collins TJ, Solomon EI, George SD, Yachandra VK (2007) Polarized X-ray absorption spectroscopy of single-crystal Mn(V) complexes relevant to the oxygen-evolving complex of photosystem II. J Am Chem Soc 129: 12989-13000.