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Journal of General Physiology

Volumn 140, Issue 2, 2012, Pages 159-173

A data-driven model of a modal gated ion channel: The inositol 1,4,5-trisphosphate receptor in insect Sf9 cells

(3) Ullah, Ghanim a Mak, Don On Daniel b Pearson, John E a

a LOS ALAMOS NATIONAL LABORATORY (United States)

b UNIVERSITY OF PENNSYLVANIA (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM; INOSITOL 1,4,5 TRISPHOSPHATE; INOSITOL 1,4,5 TRISPHOSPHATE RECEPTOR; LIGAND;

ANIMAL; ARTICLE; BINDING SITE; BIOLOGICAL MODEL; CHANNEL GATING; CHEMISTRY; KINETICS; METABOLISM; PROTEIN CONFORMATION; SF9 CELL; SPODOPTERA;

ANIMALS; BINDING SITES; CALCIUM; INOSITOL 1,4,5-TRISPHOSPHATE; INOSITOL 1,4,5-TRISPHOSPHATE RECEPTORS; ION CHANNEL GATING; KINETICS; LIGANDS; MODELS, NEUROLOGICAL; PROTEIN CONFORMATION; SF9 CELLS; SPODOPTERA;

EID: 84865607039 PISSN: 00221295 EISSN: 15407748 Source Type: Journal
DOI: 10.1085/jgp.201110753 Document Type: Article

Times cited : (37)

References (30)

1
- 0019322674
- Solvent viscosity and protein dynamics
- Beece, D., L. Eisenstein, H. Frauenfelder, D. Good, M.C. Marden, L. Reinisch, A.H. Reynolds, L.B. Sorensen, and K.T. Yue. 1980. Solvent viscosity and protein dynamics. Biochemistry. 19:5147-5157. http://dx.doi.org/10.1021/bi00564a001
- (1980) Biochemistry , vol.19 , pp. 5147-5157
- Beece, D.¹ Eisenstein, L.² Frauenfelder, H.³ Good, D.⁴ Marden, M.C.⁵ Reinisch, L.⁶ Reynolds, A.H.⁷ Sorensen, L.B.⁸ Yue, K.T.⁹

2
- 0032531818
- Calcium-a life and death signal
- Berridge, M.J., M.D. Bootman, and P. Lipp. 1998. Calcium-a life and death signal. Nature. 395:645-648. http://dx.doi.org/10.1038/27094
- (1998) Nature , vol.395 , pp. 645-648
- Berridge, M.J.¹ Bootman, M.D.² Lipp, P.³

3
- 0037069667
- Structure of the inositol 1,4 5-trisphosphate receptor binding core in complex with its ligand
- Bosanac, I., J.R. Alattia, T.K. Mal, J. Chan, S. Talarico, F.K. Tong, K.I. Tong, F. Yoshikawa, T. Furuichi, M. Iwai, et al. 2002. Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand. Nature. 420:696-700. http://dx.doi.org/10.1038/nature01268
- (2002) Nature , vol.420 , pp. 696-700
- Bosanac, I.¹ Alattia, J.R.² Mal, T.K.³ Chan, J.⁴ Talarico, S.⁵ Tong, F.K.⁶ Tong, K.I.⁷ Yoshikawa, F.⁸ Furuichi, T.⁹ Iwai, M.¹⁰

4
- 52549103562
- Academic Press, New York
- Box, G.E.P. 1979. Robustness in the Strategy of Scientific Model Building. Academic Press, New York. 312 pp.
- (1979) Robustness in the Strategy of Scientific Model Building , pp. 312
- Box, G.E.P.¹

5
- 18144410993
- Using independent open-to-closed transitions to simplify aggregated Markov models of ion channel gating kinetics
- Bruno, W.J., J. Yang, and J.E. Pearson. 2005. Using independent open-to-closed transitions to simplify aggregated Markov models of ion channel gating kinetics. Proc. Natl. Acad. Sci. USA. 102:6326-6331. http://dx.doi.org/10.1073/pnas.0409110102
- (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 6326-6331
- Bruno, W.J.¹ Yang, J.² Pearson, J.E.³

6
- 0003757884
- Sixth edition. Brooks/Cole Publishing Company, Pacific Grove, CA
- Cheney, E., and D. Kincaid. 2007. Numerical Mathematics and Computing. Sixth edition. Brooks/Cole Publishing Company, Pacific Grove, CA. 784 pp.
- (2007) Numerical Mathematics and Computing , pp. 784
- Cheney, E.¹ Kincaid, D.²

7
- 0019522622
- On the stochastic properties of single ion channels
- Colquhoun, D., and A.G. Hawkes. 1981. On the stochastic properties of single ion channels. Proc. R. Soc. Lond. B Biol. Sci. 211:205- 235. http://dx.doi.org/10.1098/rspb.1981.0003
- (1981) Proc. R. Soc. Lond. B Biol. Sci , vol.211 , pp. 205-235
- Colquhoun, D.¹ Hawkes, A.G.²

8
- 0037337182
- 2+ release from intracellular stores
- 2+ release from intracellular stores. Biochem. J. 370:621-629. http://dx.doi.org/10.1042/BJ20021289
- (2003) Biochem. J , vol.370 , pp. 621-629
- Dawson, A.P.¹ Lea, E.J.² Irvine, R.F.³

9
- 0026705276
- 2+ concentration
- 2+ concentration. Proc. Natl. Acad. Sci. USA. 89:9895-9899. http://dx.doi.org/10.1073/pnas.89.20.9895
- (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 9895-9899
- De Young, G.W.¹ Keizer, J.²

10
- 0014280059
- New looks and outlooks on physical enzymology
- Eigen, M. 1968. New looks and outlooks on physical enzymology. Q. Rev. Biophys. 1:3-33. http://dx.doi.org/10.1017/S0033583500000445
- (1968) Q. Rev. Biophys , vol.1 , pp. 3-33
- Eigen, M.¹

11
- 34248584090
- 2+ release channels
- 2+ release channels. Physiol. Rev. 87:593-658. http://dx.doi.org/10.1152/physrev.00035.2006
- (2007) Physiol. Rev , vol.87 , pp. 593-658
- Foskett, J.K.¹ White, C.² Cheung, K.H.³ Mak, D.O.D.⁴

12
- 1642393141
- 3 receptor with a luminal calcium binding site: stochastic simulations and analysis
- 3 receptor with a luminal calcium binding site: stochastic simulations and analysis. Cell Calcium. 35:403-413. http://dx.doi.org/10.1016/j.ceca.2003.10.004
- (2004) Cell Calcium , vol.35 , pp. 403-413
- Fraiman, D.¹ Dawson, S.P.²

13
- 0000587771
- On aggregated markov processes
- Fredkin, D., and J.A. Rice. 1986. On aggregated markov processes. J. Appl. Probab. 23:208-214. http://dx.doi.org/10.2307/3214130
- (1986) J. Appl. Probab , vol.23 , pp. 208-214
- Fredkin, D.¹ Rice, J.A.²

14
- 68049137499
- A kinetic model of the inositol trisphosphate receptor based on single-channel data
- Gin, E., M. Falcke, L.E. Wagner II, D.I. Yule, and J. Sneyd. 2009. A kinetic model of the inositol trisphosphate receptor based on single-channel data. Biophys. J. 96:4053-4062. http://dx.doi.org/10.1016/j.bpj.2008.12.3964
- (2009) Biophys. J , vol.96 , pp. 4053-4062
- Gin, E.¹ Falcke, M.² Wagner II, L.E.³ Yule, D.I.⁴ Sneyd, J.⁵

15
- 0032518714
- 3 receptors in permeabilized guinea-pig vascular smooth muscle cells
- 3 receptors in permeabilized guinea-pig vascular smooth muscle cells. J. Physiol. 506:407- 414. http://dx.doi.org/10.1111/j.1469-7793.1998.407bw.x
- (1998) J. Physiol , vol.506 , pp. 407-414
- Hirose, K.¹ Kadowaki, S.² Iino, M.³

16
- 33744905361
- 2+ release
- 2+ release. J. Physiol. 573:645-662. http://dx.doi.org/10.1113/jphysiol.2006.109504
- (2006) J. Physiol , vol.573 , pp. 645-662
- Ionescu, L.¹ Cheung, K.H.² Vais, H.³ Mak, D.O.D.⁴ White, C.⁵ Foskett, J.K.⁶

17
- 36549079005
- 3 receptor calcium release channels
- 3 receptor calcium release channels. J. Gen. Physiol. 130:631-645. http://dx.doi.org/10.1085/jgp.200709859
- (2007) J. Gen. Physiol , vol.130 , pp. 631-645
- Ionescu, L.¹ White, C.² Cheung, K.H.³ Shuai, J.⁴ Parker, I.⁵ Pearson, J.E.⁶ Foskett, J.K.⁷ Mak, D.O.D.⁸

18
- 0242460529
- 3 regulation of InsP3R single-channel gating
- 3 regulation of InsP3R single-channel gating. J. Gen. Physiol. 122:583-603. http://dx.doi.org/10.1085/jgp.200308809
- (2003) J. Gen. Physiol , vol.122 , pp. 583-603
- Mak, D.O.D.¹ McBride, S.M.² Foskett, J.K.³

19
- 35748972650
- 2+ release channels
- 2+ release channels. EMBO Rep. 8:1044-1051. http://dx.doi.org/10.1038/sj.embor.7401087
- (2007) EMBO Rep , vol.8 , pp. 1044-1051
- Mak, D.O.D.¹ Pearson, J.E.² Loong, K.P.C.³ Datta, S.⁴ Fernández-Mongil, M.⁵ Foskett, J.K.⁶

20
- 0030610150
- 2+ safeguards against spontaneous activity
- 2+ safeguards against spontaneous activity. Curr. Biol. 7:510-518. http://dx.doi.org/10.1016/S0960-9822(06)00222-3
- (1997) Curr. Biol , vol.7 , pp. 510-518
- Marchant, J.S.¹ Taylor, C.W.²

21
- 0003868968
- World Scientific Publishing Company, Singapore
- Mcquarrie, A.D.R. 1998. Regression and Time Series Model Selection. World Scientific Publishing Company, Singapore. 455 pp.
- (1998) Regression and Time Series Model Selection , pp. 455
- Mcquarrie, A.D.R.¹

22
- 0030956174
- Maximum likelihood estimation of aggregated Markov processes
- Qin, F., A. Auerbach, and F. Sachs. 1997. Maximum likelihood estimation of aggregated Markov processes. Proc. Biol. Sci. 264:375- 383. http://dx.doi.org/10.1098/rspb.1997.0054
- (1997) Proc. Biol. Sci , vol.264 , pp. 375-383
- Qin, F.¹ Auerbach, A.² Sachs, F.³

23
- 0003839881
- Cambridge University Press, Cambridge
- Redner, S. 2001. A Guide to First-Passage Processes. Cambridge University Press, Cambridge. 312 pp.
- (2001) A Guide to First-Passage Processes , pp. 312
- Redner, S.¹

24
- 34548231038
- 2+ feedback
- 2+ feedback. Biophys. J. 93:1151-1162. http://dx.doi.org/10.1529/biophysj.107.108795
- (2007) Biophys. J , vol.93 , pp. 1151-1162
- Shuai, J.¹ Pearson, J.E.² Foskett, J.K.³ Mak, D.O.D.⁴ Parker, I.⁵

25
- 0037133251
- A dynamic model of the type-2 inositol trisphosphate receptor
- Sneyd, J., and J.F. Dufour. 2002. A dynamic model of the type-2 inositol trisphosphate receptor. Proc. Natl. Acad. Sci. USA. 99:2398- 2403. http://dx.doi.org/10.1073/pnas.032281999
- (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 2398-2403
- Sneyd, J.¹ Dufour, J.F.²

26
- 70349651750
- A simple sequential-binding model for calcium puffs
- Swaminathan, D., G. Ullah, and P. Jung. 2009. A simple sequential-binding model for calcium puffs. Chaos. 19:037109. http://dx.doi.org/10.1063/1.3152227
- (2009) Chaos , vol.19 , pp. 037109
- Swaminathan, D.¹ Ullah, G.² Jung, P.³

27
- 0028125058
- 2+-binding sites along the permeation pathway
- 2+-binding sites along the permeation pathway. Proc. Natl. Acad. Sci. USA. 91:10074-10078. http://dx.doi.org/10.1073/pnas.91.21.10074
- (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 10074-10078
- Swillens, S.¹ Combettes, L.² Champeil, P.³

28
- 0030070012
- 3-sensitive calcium channel kinetics
- 3-sensitive calcium channel kinetics. Biophys. J. 70:246-263. http://dx.doi.org/10.1016/S0006-3495(96)79567-X
- (1996) Biophys. J , vol.70 , pp. 246-263
- Tang, Y.¹ Stephenson, J.L.² Othmer, H.G.³

29
- 84865583328
- Simplification of reversible Markov chains by removal of states with low equilibrium occupancy
- Ullah, G., W.J. Bruno, and J.E. Peason. 2012. Simplification of reversible Markov chains by removal of states with low equilibrium occupancy. J. Thor. Biol. http://dx.doi.org/10.1016/j.jtbi.2012.07.007
- (2012) J. Thor. Biol.
- Ullah, G.¹ Bruno, W.J.² Peason, J.E.³

30
- 33746662922
- On imposing detailed balance in complex reaction mechanisms
- Yang, J., W.J. Bruno, W.S. Hlavacek, and J.E. Pearson. 2006. On imposing detailed balance in complex reaction mechanisms. Biophys. J. 91:1136-1141. http://dx.doi.org/10.1529/biophysj.105.071852
- (2006) Biophys. J , vol.91 , pp. 1136-1141
- Yang, J.¹ Bruno, W.J.² Hlavacek, W.S.³ Pearson, J.E.⁴

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