메뉴 건너뛰기




Volumn 7, Issue 8, 2012, Pages

Kinetic modelling of GlmU reactions - prioritization of reaction for therapeutic application

Author keywords

[No Author keywords available]

Indexed keywords

ACYLTRANSFERASE; BACTERIAL ENZYME; ENZYME INHIBITOR; GLUCOSAMINE 1 PHOSPHATE N ACETYLTRANSFERASE; HEXOSE 1 PHOSPHATE URIDYLYLTRANSFERASE; N ACETYLGLUCOSAMINE 1 PHOSPHATE URIDYLYTRANSFERASE; PEPTIDOGLYCAN; UNCLASSIFIED DRUG;

EID: 84865437024     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0043969     Document Type: Article
Times cited : (10)

References (33)
  • 5
    • 82455162549 scopus 로고    scopus 로고
    • Kinetic properties of Mycobacterium tuberculosis bifunctional GlmU
    • Zhou Y, Xin Y, Sha S, Ma Y, (2011) Kinetic properties of Mycobacterium tuberculosis bifunctional GlmU. Archives of Microbiology 193: 751-757.
    • (2011) Archives of Microbiology , vol.193 , pp. 751-757
    • Zhou, Y.1    Xin, Y.2    Sha, S.3    Ma, Y.4
  • 6
    • 0345701347 scopus 로고    scopus 로고
    • Genes required for mycobacterial growth defined by high density mutagenesis
    • Sassetti CM, Boyd DH, Rubin EJ, (2003) Genes required for mycobacterial growth defined by high density mutagenesis. Molecular microbiology 48: 77-84.
    • (2003) Molecular Microbiology , vol.48 , pp. 77-84
    • Sassetti, C.M.1    Boyd, D.H.2    Rubin, E.J.3
  • 7
    • 48349097098 scopus 로고    scopus 로고
    • Expression, essentiality, and a microtiter plate assay for mycobacterial GlmU, the bifunctional glucosamine-1-phosphate acetyltransferase and N-acetylglucosamine-1-phosphate uridyltransferase
    • Zhang W, Jones VC, Scherman MS, Mahapatra S, Crick D, et al. (2008) Expression, essentiality, and a microtiter plate assay for mycobacterial GlmU, the bifunctional glucosamine-1-phosphate acetyltransferase and N-acetylglucosamine-1-phosphate uridyltransferase. International Journal of Biochemistry and Cell Biology 40: 2560-2571.
    • (2008) International Journal of Biochemistry and Cell Biology , vol.40 , pp. 2560-2571
    • Zhang, W.1    Jones, V.C.2    Scherman, M.S.3    Mahapatra, S.4    Crick, D.5
  • 8
    • 0031021873 scopus 로고    scopus 로고
    • Glycolysis in bloodstream form Trypanosoma brucei can be understood in terms of the kinetics of the glycolytic enzymes
    • Bakker BM, Michels PAM, Opperdoes FR, Westerhoff HV, (1997) Glycolysis in bloodstream form Trypanosoma brucei can be understood in terms of the kinetics of the glycolytic enzymes. Journal of Biological Chemistry 272: 3207-3215.
    • (1997) Journal of Biological Chemistry , vol.272 , pp. 3207-3215
    • Bakker, B.M.1    Michels, P.A.M.2    Opperdoes, F.R.3    Westerhoff, H.V.4
  • 10
    • 33748605597 scopus 로고    scopus 로고
    • Kinetic modeling of tricarboxylic acid cycle and glyoxylate bypass in Mycobacterium tuberculosis, and its application to assessment of drug targets
    • Singh VK, Ghosh I, (2006) Kinetic modeling of tricarboxylic acid cycle and glyoxylate bypass in Mycobacterium tuberculosis, and its application to assessment of drug targets. Theoretical Biology and Medical Modelling 3: 27.
    • (2006) Theoretical Biology and Medical Modelling , vol.3 , pp. 27
    • Singh, V.K.1    Ghosh, I.2
  • 11
    • 42949164125 scopus 로고    scopus 로고
    • Formulating genome-scale kinetic models in the post-genome era
    • Jamshidi N, Palsson BØ, (2008) Formulating genome-scale kinetic models in the post-genome era. Molecular Systems Biology 4: 171.
    • (2008) Molecular Systems Biology , vol.4 , pp. 171
    • Jamshidi, N.1    Palsson, B.Ø.2
  • 14
    • 44049087026 scopus 로고    scopus 로고
    • Integrating cybernetic modeling with pathway analysis provides a dynamic, systems-level description of metabolic control
    • Young JD, Henne KL, Morgan JA, Konopka AE, Ramkrishna D, (2008) Integrating cybernetic modeling with pathway analysis provides a dynamic, systems-level description of metabolic control. Biotechnology and bioengineering 100: 542-559.
    • (2008) Biotechnology and Bioengineering , vol.100 , pp. 542-559
    • Young, J.D.1    Henne, K.L.2    Morgan, J.A.3    Konopka, A.E.4    Ramkrishna, D.5
  • 15
    • 75549090213 scopus 로고    scopus 로고
    • KEGG for representation and analysis of molecular networks involving diseases and drugs
    • Kanehisa M, Goto S, Furumichi M, Tanabe M, Hirakawa M, (2010) KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic acids research 38: D355-D360.
    • (2010) Nucleic Acids Research , vol.38
    • Kanehisa, M.1    Goto, S.2    Furumichi, M.3    Tanabe, M.4    Hirakawa, M.5
  • 17
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • Kanehisa M, Goto S, (2000) KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic acids research 28: 27-30.
    • (2000) Nucleic Acids Research , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 18
    • 0030051742 scopus 로고    scopus 로고
    • Acetyltransfer Precedes Uridylyltransfer in the Formation of UDP-N-acetylglucosamine in Separable Active Sites of the Bifunctional GlmU Protein of Escherichia coli†
    • Gehring AM, Lees WJ, Mindiola DJ, Walsh CT, Brown ED, (1996) Acetyltransfer Precedes Uridylyltransfer in the Formation of UDP-N-acetylglucosamine in Separable Active Sites of the Bifunctional GlmU Protein of Escherichia coli†. Biochemistry 35: 579-585.
    • (1996) Biochemistry , vol.35 , pp. 579-585
    • Gehring, A.M.1    Lees, W.J.2    Mindiola, D.J.3    Walsh, C.T.4    Brown, E.D.5
  • 22
    • 0027938707 scopus 로고
    • Copurification of glucosamine-1-phosphate acetyltransferase and N-acetylglucosamine-1-phosphate uridyltransferase activities of Escherichia coli: characterization of the glmU gene product as a bifunctional enzyme catalyzing two subsequent steps in the pathway for UDP-N-acetylglucosamine synthesis
    • Mengin-Lecreulx D, Van Heijenoort J, (1994) Copurification of glucosamine-1-phosphate acetyltransferase and N-acetylglucosamine-1-phosphate uridyltransferase activities of Escherichia coli: characterization of the glmU gene product as a bifunctional enzyme catalyzing two subsequent steps in the pathway for UDP-N-acetylglucosamine synthesis. Journal of bacteriology 176: 5788-5795.
    • (1994) Journal of Bacteriology , vol.176 , pp. 5788-5795
    • Mengin-Lecreulx, D.1    van Heijenoort, J.2
  • 23
    • 2342590693 scopus 로고    scopus 로고
    • Cofactor engineering of intracellular CoA/acetyl-CoA and its effect on metabolic flux redistribution in Escherichia coli
    • Vadali RV, Bennett GN, San KY, (2004) Cofactor engineering of intracellular CoA/acetyl-CoA and its effect on metabolic flux redistribution in Escherichia coli. Metabolic Engineering 6: 133-139.
    • (2004) Metabolic Engineering , vol.6 , pp. 133-139
    • Vadali, R.V.1    Bennett, G.N.2    San, K.Y.3
  • 24
    • 64549142471 scopus 로고    scopus 로고
    • Quantitative analysis of intracellular sugar phosphates and sugar nucleotides in encapsulated streptococci using HPAEC PAD
    • Marcellin E, Nielsen LK, Abeydeera P, Krömer JO, (2009) Quantitative analysis of intracellular sugar phosphates and sugar nucleotides in encapsulated streptococci using HPAEC PAD. Biotechnology Journal 4: 58-63.
    • (2009) Biotechnology Journal , vol.4 , pp. 58-63
    • Marcellin, E.1    Nielsen, L.K.2    Abeydeera, P.3    Krömer, J.O.4
  • 25
    • 68049100110 scopus 로고    scopus 로고
    • Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
    • Bennett BD, Kimball EH, Gao M, Osterhout R, Van Dien SJ, et al. (2009) Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli. Nature chemical biology 5: 593-599.
    • (2009) Nature Chemical Biology , vol.5 , pp. 593-599
    • Bennett, B.D.1    Kimball, E.H.2    Gao, M.3    Osterhout, R.4    van Dien, S.J.5
  • 26
    • 9244225687 scopus 로고    scopus 로고
    • Distribution of thiols in microorganisms: mycothiol is a major thiol in most actinomycetes
    • Newton GL, Arnold K, Price MS, Sherrill C, Delcardayre SB, et al. (1996) Distribution of thiols in microorganisms: mycothiol is a major thiol in most actinomycetes. Journal of bacteriology 178: 1990-1995.
    • (1996) Journal of Bacteriology , vol.178 , pp. 1990-1995
    • Newton, G.L.1    Arnold, K.2    Price, M.S.3    Sherrill, C.4    Delcardayre, S.B.5
  • 27
    • 0024720464 scopus 로고
    • Intracellular PPi concentration is not directly dependent on amount of inorganic pyrophosphatase in Escherichia coli K-12 cells
    • Kukko-Kalske E, Lintunen M, Inen MK, Lahti R, Heinonen J, (1989) Intracellular PPi concentration is not directly dependent on amount of inorganic pyrophosphatase in Escherichia coli K-12 cells. Journal of bacteriology 171: 4498-4500.
    • (1989) Journal of Bacteriology , vol.171 , pp. 4498-4500
    • Kukko-Kalske, E.1    Lintunen, M.2    Inen, M.K.3    Lahti, R.4    Heinonen, J.5
  • 28
    • 0037342537 scopus 로고    scopus 로고
    • The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
    • Hucka M, Finney A, Sauro HM, Bolouri H, Doyle JC, et al. (2003) The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 19: 524-531.
    • (2003) Bioinformatics , vol.19 , pp. 524-531
    • Hucka, M.1    Finney, A.2    Sauro, H.M.3    Bolouri, H.4    Doyle, J.C.5
  • 30
    • 32544443964 scopus 로고    scopus 로고
    • Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology
    • Schmidt H, Jirstrand M, (2006) Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology. Bioinformatics 22: 514-515.
    • (2006) Bioinformatics , vol.22 , pp. 514-515
    • Schmidt, H.1    Jirstrand, M.2
  • 31
    • 0026802334 scopus 로고
    • Metabolic control analysis: a survey of its theoretical and experimental development
    • Fell DA, (1992) Metabolic control analysis: a survey of its theoretical and experimental development. Biochemical Journal 286: 313-330.
    • (1992) Biochemical Journal , vol.286 , pp. 313-330
    • Fell, D.A.1
  • 33
    • 80053567773 scopus 로고    scopus 로고
    • Design and synthesis of novel cell wall inhibitors of Mycobacterium tuberculosis GlmM and GlmU
    • Li Y, Zhou Y, Ma Y, Li X, (2011) Design and synthesis of novel cell wall inhibitors of Mycobacterium tuberculosis GlmM and GlmU. Carbohydrate Research 346: 1714-1720.
    • (2011) Carbohydrate Research , vol.346 , pp. 1714-1720
    • Li, Y.1    Zhou, Y.2    Ma, Y.3    Li, X.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.