메뉴 건너뛰기




Volumn 102, Issue 9, 2012, Pages 867-877

Characterizing heterogeneity of disease incidence in a spatial hierarchy: A case study from a decade of observations of fusarium head blight of wheat

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOLOGICAL MODEL; FUSARIUM; MICROBIOLOGY; PHYSIOLOGY; PLANT DISEASE; STATISTICAL MODEL; TIME; WHEAT;

EID: 84865429052     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-11-11-0323     Document Type: Article
Times cited : (15)

References (66)
  • 1
    • 84985524322 scopus 로고
    • Some models for overdispersed binomial data
    • Anderson, D. A. 1988. Some models for overdispersed binomial data. Aust. J. Stat. 30:125-148.
    • (1988) Aust. J. Stat. , vol.30 , pp. 125-148
    • Anderson, D.A.1
  • 3
    • 21244480589 scopus 로고    scopus 로고
    • Variance partitioning in multilevel logistic models that exhibit overdispersion
    • Browne, W. J., Subramanian, S. V., Jones, K., and Goldstein, H. 2005. Variance partitioning in multilevel logistic models that exhibit overdispersion. J. R. Stat. Soc. A 168:599-613.
    • (2005) J. R. Stat. Soc. A , vol.168 , pp. 599-613
    • Browne, W.J.1    Subramanian, S.V.2    Jones, K.3    Goldstein, H.4
  • 4
    • 1842845200 scopus 로고    scopus 로고
    • Influence of cropping system on Fusarium head blight and mycotoxin levels in winter wheat
    • Champeil, A. Fourbet, J. F., Doré. T., and Rossignol, L. 2004. Influence of cropping system on Fusarium head blight and mycotoxin levels in winter wheat. Crop Prot. 23:531-537.
    • (2004) Crop Prot. , vol.23 , pp. 531-537
    • Champeil, A.1    Fourbet, J.F.2    Doré., T.3    Rossignol, L.4
  • 6
    • 0028301622 scopus 로고
    • The intraclass correlation coefficient: Distribution-free definition and test
    • Commenges, D., and Jacqmin, H. 1994. The intraclass correlation coefficient: distribution-free definition and test. Biometrics 50:517-526.
    • (1994) Biometrics , vol.50 , pp. 517-526
    • Commenges, D.1    Jacqmin, H.2
  • 7
    • 18044368560 scopus 로고    scopus 로고
    • Spatial patterns of Fusarium head blight in New York wheat fields suggests role of airborne inoculum
    • Online publication. doi:10.1094/PHP-2003-0418-01-RS
    • Del Ponte, E. M., Shah, M., and Bergstrom, G. C. 2003. Spatial patterns of Fusarium head blight in New York wheat fields suggests role of airborne inoculum. Plant Health Progress. Online publication. doi:10.1094/PHP-2003-0418- 01-RS
    • (2003) Plant Health Progress
    • Del Ponte, E.M.1    Shah, M.2    Bergstrom, G.C.3
  • 8
    • 0035913210 scopus 로고    scopus 로고
    • The use of multilevel models to evaluate sources of variation in reproductive performance in dairy cattle in Reunion Island
    • Dohoo, I. R., Tillard, E., Stryhn, H., and Faye, B. 2001. The use of multilevel models to evaluate sources of variation in reproductive performance in dairy cattle in Reunion Island. Prev. Vet. Med. 50:127- 144.
    • (2001) Prev. Vet. Med. , vol.50 , pp. 127-144
    • Dohoo, I.R.1    Tillard, E.2    Stryhn, H.3    Faye, B.4
  • 9
    • 0027286249 scopus 로고
    • Modifying the t test for assessing the correlation between two spatial processes
    • Dutilleul, P., Clifford, P., Richardson, S., and Hemon, D. 1993. Modifying the t test for assessing the correlation between two spatial processes. Biometrics 49:305-314.
    • (1993) Biometrics , vol.49 , pp. 305-314
    • Dutilleul, P.1    Clifford, P.2    Richardson, S.3    Hemon, D.4
  • 11
    • 77449131310 scopus 로고    scopus 로고
    • The intracluster correlation coefficient in cluster randomized trials: A review of definitions
    • Eldridge, S. M., Ukoumunne, O. C., and Carlin, J. B. 2009. The intracluster correlation coefficient in cluster randomized trials: A review of definitions. Int. Stat. Rev. 77:378-394.
    • (2009) Int. Stat. Rev. , vol.77 , pp. 378-394
    • Eldridge, S.M.1    Ukoumunne, O.C.2    Carlin, J.B.3
  • 12
    • 1042298109 scopus 로고    scopus 로고
    • Partitioning variation in multilevel models
    • Goldstein, H., Browne, W., and Rasbash, J. 2002. Partitioning variation in multilevel models. Underst. Stat. 1:223-231.
    • (2002) Underst. Stat. , vol.1 , pp. 223-231
    • Goldstein, H.1    Browne, W.2    Rasbash, J.3
  • 13
    • 33846331654 scopus 로고    scopus 로고
    • Size, shape and intensity of aggregation of take-all disease during natural epidemics in second wheat crops
    • Gosme, M., Willocquet, L., and Lucas, P. 2007. Size, shape and intensity of aggregation of take-all disease during natural epidemics in second wheat crops. Plant Pathol. 56:87-96.
    • (2007) Plant Pathol. , vol.56 , pp. 87-96
    • Gosme, M.1    Willocquet, L.2    Lucas, P.3
  • 14
    • 15944405745 scopus 로고    scopus 로고
    • Modelling habitat associations with fingernail clam (family: Sphaeriidae) counts at multiple spatial scales using hierarchical count models
    • Gray, B. R., Haro, R. J., Rogala, J. T., and Sauer, J. S. 2005. Modelling habitat associations with fingernail clam (family: Sphaeriidae) counts at multiple spatial scales using hierarchical count models. Freshwater Biol. 50:715-729.
    • (2005) Freshwater Biol. , vol.50 , pp. 715-729
    • Gray, B.R.1    Haro, R.J.2    Rogala, J.T.3    Sauer, J.S.4
  • 15
  • 16
    • 51849089277 scopus 로고    scopus 로고
    • Agronomic and economic responses of spring wheat to management of Fusarium head blight
    • Hollingsworth, C. R., Motteberg, C. D., Wiersma, J. V., and Atkinson, L. M. 2008. Agronomic and economic responses of spring wheat to management of Fusarium head blight. Plant Dis. 92:1339-1348.
    • (2008) Plant Dis. , vol.92 , pp. 1339-1348
    • Hollingsworth, C.R.1    Motteberg, C.D.2    Wiersma, J.V.3    Atkinson, L.M.4
  • 17
    • 0028995222 scopus 로고
    • Some methods allowing for aggregated patterns of disease incidence in the analysis of data from designed experiments
    • Hughes, G., and Madden, L. V. 1995. Some methods allowing for aggregated patterns of disease incidence in the analysis of data from designed experiments. Plant Pathol. 44:927-943.
    • (1995) Plant Pathol. , vol.44 , pp. 927-943
    • Hughes, G.1    Madden, L.V.2
  • 18
    • 0030024781 scopus 로고    scopus 로고
    • Cluster sampling for disease incidence data
    • Hughes, G., Madden, L. V., and Munkvold, G. P. 1996. Cluster sampling for disease incidence data. Phytopathology 86:132-137.
    • (1996) Phytopathology , vol.86 , pp. 132-137
    • Hughes, G.1    Madden, L.V.2    Munkvold, G.P.3
  • 19
    • 4544339327 scopus 로고    scopus 로고
    • Daamen's incidence- severity relationship revisited
    • Hughes, G., McRoberts, N., and Madden, L. V. 2004. Daamen's incidence- severity relationship revisited. Eur. J. Plant Pathol. 110:759-761.
    • (2004) Eur. J. Plant Pathol. , vol.110 , pp. 759-761
    • Hughes, G.1    McRoberts, N.2    Madden, L.V.3
  • 20
    • 0030943329 scopus 로고    scopus 로고
    • Relationships between disease incidence at two levels in a spatial hierarchy
    • Hughes, G., McRoberts, N., Madden, L. V., and Gottwald, T. R. 1997. Relationships between disease incidence at two levels in a spatial hierarchy. Phytopathology 87:542-550.
    • (1997) Phytopathology , vol.87 , pp. 542-550
    • Hughes, G.1    McRoberts, N.2    Madden, L.V.3    Gottwald, T.R.4
  • 21
    • 0031813451 scopus 로고    scopus 로고
    • Application of the logistic-normal-binomial distribution to the analysis of Eutypa dieback disease incidence
    • Hughes, G., Munkvold, G. P., and Samita, S. 1998. Application of the logistic-normal-binomial distribution to the analysis of Eutypa dieback disease incidence. Int. J. Pest Manage. 44:35-42.
    • (1998) Int. J. Pest Manage. , vol.44 , pp. 35-42
    • Hughes, G.1    Munkvold, G.P.2    Samita, S.3
  • 22
    • 0031873785 scopus 로고    scopus 로고
    • Analysis of patterns of pineapple mealybug wilt disease in Sri Lanka
    • Hughes, G., and Samita, S. 1998. Analysis of patterns of pineapple mealybug wilt disease in Sri Lanka. Plant Dis. 82:885-890.
    • (1998) Plant Dis. , vol.82 , pp. 885-890
    • Hughes, G.1    Samita, S.2
  • 23
    • 33646692461 scopus 로고    scopus 로고
    • Mixed model prediction and small area estimation
    • Jiang, J., and Lahiri, P. 2006. Mixed model prediction and small area estimation. Test 15:1-96.
    • (2006) Test , vol.15 , pp. 1-96
    • Jiang, J.1    Lahiri, P.2
  • 24
    • 79955406253 scopus 로고    scopus 로고
    • Tillage, crop rotation, and hybrid effects on residue and corn anthracnose occurrence in Wisconsin
    • Jirak-Peterson, J. C., and Esker, P. D. 2011. Tillage, crop rotation, and hybrid effects on residue and corn anthracnose occurrence in Wisconsin. Plant Dis. 95:601-610.
    • (2011) Plant Dis. , vol.95 , pp. 601-610
    • Jirak-Peterson, J.C.1    Esker, P.D.2
  • 25
    • 47749090885 scopus 로고    scopus 로고
    • Accuracy of Laplace approximation for discrete response mixed models
    • Joe, H. 2008. Accuracy of Laplace approximation for discrete response mixed models. Comput. Stat. Data Anal. 52:5066-5074.
    • (2008) Comput. Stat. Data Anal. , vol.52 , pp. 5066-5074
    • Joe, H.1
  • 26
    • 84865412790 scopus 로고    scopus 로고
    • Large-sample theory
    • Springer, New York
    • Keener, R. W. 2010. Large-sample theory. Pages 129-149 in: Theoretical Statistics. Springer, New York.
    • (2010) Theoretical Statistics , pp. 129-149
    • Keener, R.W.1
  • 27
    • 84857073815 scopus 로고    scopus 로고
    • The spread of a released clone of Gibberella zeae from different amounts of infested corn residue
    • Keller, M. D., Thomason, W. E., and Schmale, D. G., III. 2011. The spread of a released clone of Gibberella zeae from different amounts of infested corn residue. Plant Dis. 95:1458-1464.
    • (2011) Plant Dis. , vol.95 , pp. 1458-1464
    • Keller, M.D.1    Thomason, W.E.2    Schmale Iii, D.G.3
  • 28
    • 0004202330 scopus 로고
    • John Wiley & Sons, New York
    • Kish, L. 1965. Survey Sampling. John Wiley & Sons, New York.
    • (1965) Survey Sampling
    • Kish, L.1
  • 30
    • 77955630513 scopus 로고    scopus 로고
    • Relationship between yearly fluctuations in Fusarium head blight intensity and environmental variables: A window-pane analysis
    • Kriss, A. B., Paul, P. A., and Madden, L. V. 2010. Relationship between yearly fluctuations in Fusarium head blight intensity and environmental variables: a window-pane analysis. Phytopathology 100:784-797.
    • (2010) Phytopathology , vol.100 , pp. 784-797
    • Kriss, A.B.1    Paul, P.A.2    Madden, L.V.3
  • 31
    • 84855501613 scopus 로고    scopus 로고
    • Variability in Fusarium head blight epidemics in relation to global climate fluctuations as represented by the El Niño Southern Oscillation and other atmospheric patterns
    • Kriss, A. B., Paul, P. A., and Madden, L. V. 2012. Variability in Fusarium head blight epidemics in relation to global climate fluctuations as represented by the El Niño Southern Oscillation and other atmospheric patterns. Phytopathology 102:55-64.
    • (2012) Phytopathology , vol.102 , pp. 55-64
    • Kriss, A.B.1    Paul, P.A.2    Madden, L.V.3
  • 33
    • 0029175126 scopus 로고
    • Plant disease incidence: Distributions, heterogeneity, and temporal analysis
    • Madden, L. V., and Hughes, G. 1995. Plant disease incidence: Distributions, heterogeneity, and temporal analysis. Annu. Rev. Phytopathol. 33:529- 564.
    • (1995) Annu. Rev. Phytopathol. , vol.33 , pp. 529-564
    • Madden, L.V.1    Hughes, G.2
  • 34
    • 0032697504 scopus 로고    scopus 로고
    • Sampling for plant disease incidence
    • Madden, L. V., and Hughes, G. 1999. Sampling for plant disease incidence. Phytopathology 89:1088-1103.
    • (1999) Phytopathology , vol.89 , pp. 1088-1103
    • Madden, L.V.1    Hughes, G.2
  • 36
    • 51249163628 scopus 로고
    • Spatial pattern analysis of the incidence of aster yellows disease in lettuce
    • Madden, L. V., Nault, L. R., Murral, D. J., and Apelt, M. R. 1995. Spatial pattern analysis of the incidence of aster yellows disease in lettuce. Res. Popul. Ecol. 37:279-289.
    • (1995) Res. Popul. Ecol. , vol.37 , pp. 279-289
    • Madden, L.V.1    Nault, L.R.2    Murral, D.J.3    Apelt, M.R.4
  • 37
    • 0036189316 scopus 로고    scopus 로고
    • Evaluation of generalized linear mixed models for analyzing disease incidence data obtained in designed experiments
    • Madden, L. V., Turechek, W. W., and Nita, M. 2002. Evaluation of generalized linear mixed models for analyzing disease incidence data obtained in designed experiments. Plant Dis. 86:316-325.
    • (2002) Plant Dis. , vol.86 , pp. 316-325
    • Madden, L.V.1    Turechek, W.W.2    Nita, M.3
  • 38
    • 0442309433 scopus 로고    scopus 로고
    • Generalized linear models
    • McCulloch, C. E. 2000. Generalized linear models. J. Am. Stat. Assoc. 95:1320-1324.
    • (2000) J. Am. Stat. Assoc. , vol.95 , pp. 1320-1324
    • McCulloch, C.E.1
  • 39
    • 0031241306 scopus 로고    scopus 로고
    • A comparison of different models for assessing variations in the sero-prevalence of infectious bovine rhinotracheitis by farm, area and district in Kenya
    • McDermott, J. J., Kadohira, M., O'Callaghan, C. J., and Shoukri, M. M. 1997. A comparison of different models for assessing variations in the sero-prevalence of infectious bovine rhinotracheitis by farm, area and district in Kenya. Prev. Vet. Med. 32:219-234.
    • (1997) Prev. Vet. Med. , vol.32 , pp. 219-234
    • McDermott, J.J.1    Kadohira, M.2    O'Callaghan, C.J.3    Shoukri, M.M.4
  • 40
    • 0000323737 scopus 로고
    • A unified approach to mixed linear models
    • McLean, R. A, Sanders, W. L., and Stroup, W. W. 1991. A unified approach to mixed linear models. Am. Stat. 45:54-64.
    • (1991) Am. Stat. , vol.45 , pp. 54-64
    • McLean, R.A.1    Sanders, W.L.2    Stroup, W.W.3
  • 41
    • 1842290404 scopus 로고    scopus 로고
    • Scab of wheat and barley: A re-emerging disease of devastating impact
    • McMullen, M., Jones, R., and Gallenberg, D. 1997. Scab of wheat and barley: A re-emerging disease of devastating impact. Plant Dis. 81:1340- 1348.
    • (1997) Plant Dis. , vol.81 , pp. 1340-1348
    • McMullen, M.1    Jones, R.2    Gallenberg, D.3
  • 42
    • 0000845731 scopus 로고
    • Approximation of sampling variances and confidence intervals for maximum likelihood estimates of variance components
    • Meyer, K., and Hill, W. G. 1992. Approximation of sampling variances and confidence intervals for maximum likelihood estimates of variance components. J. Anim. Breed. Genet. 109:264-280.
    • (1992) J. Anim. Breed. Genet. , vol.109 , pp. 264-280
    • Meyer, K.1    Hill, W.G.2
  • 44
    • 53349128921 scopus 로고    scopus 로고
    • Detecting spatial hot spots in landscape ecology
    • Nelson, T. A., and Boots, B. Detecting spatial hot spots in landscape ecology. Ecography 31:556-566.
    • Ecography , vol.31 , pp. 556-566
    • Nelson, T.A.1    Boots, B.2
  • 45
    • 47649115166 scopus 로고    scopus 로고
    • Variation in disease incidence of Phomopsis cane and leaf spot of grape in commercial vineyards in Ohio
    • Nita, M., Ellis, M. A., and Madden, L. V. 2008. Variation in disease incidence of Phomopsis cane and leaf spot of grape in commercial vineyards in Ohio. Plant Dis. 92:1053-1061.
    • (2008) Plant Dis. , vol.92 , pp. 1053-1061
    • Nita, M.1    Ellis, M.A.2    Madden, L.V.3
  • 46
    • 35748982644 scopus 로고    scopus 로고
    • Epidemiology of Fusarium head blight on small-grain cereals
    • Osborne, L. E., and Stein, J. M. 2007. Epidemiology of Fusarium head blight on small-grain cereals. Int. J. Food Microbiol. 119:103-108.
    • (2007) Int. J. Food Microbiol. , vol.119 , pp. 103-108
    • Osborne, L.E.1    Stein, J.M.2
  • 47
    • 23944518877 scopus 로고    scopus 로고
    • Relationships between incidence and severity of Fusarium head blight on winter wheat in Ohio
    • Paul, P. A., El-Allaf, S. Lipps, P. E., and Madden, L. V. 2005. Relationships between incidence and severity of Fusarium head blight on winter wheat in Ohio. Phytopathology 95:1049-1060.
    • (2005) Phytopathology , vol.95 , pp. 1049-1060
    • Paul, P.A.1    El-Allaf, S.2    Lipps, P.E.3    Madden, L.V.4
  • 48
    • 0032830785 scopus 로고    scopus 로고
    • Analysing disease incidence data from designed experiments by generalized linear mixed models
    • Piepho, H.-P. 1999. Analysing disease incidence data from designed experiments by generalized linear mixed models. Plant Pathol. 48:668-674.
    • (1999) Plant Pathol , vol.48 , pp. 668-674
    • Piepho, H.-P.1
  • 49
    • 33645565987 scopus 로고    scopus 로고
    • Efficient Laplacian and adaptive Gaussian quadrature algorithms for multilevel generalized linear mixed models
    • Pinheiro, J. C., and Chao, E. C. 2006. Efficient Laplacian and adaptive Gaussian quadrature algorithms for multilevel generalized linear mixed models. J. Comput. Graph. Stat. 15:58-81.
    • (2006) J. Comput. Graph. Stat. , vol.15 , pp. 58-81
    • Pinheiro, J.C.1    Chao, E.C.2
  • 51
    • 77950035264 scopus 로고    scopus 로고
    • Maximum likelihood for generalized linear models with nested random effects via high-order, multivariate Laplace approximation
    • Raudenbush, S. W., Yang, M.-L., and Yosef, M. 2000. Maximum likelihood for generalized linear models with nested random effects via high-order, multivariate Laplace approximation. J. Comput. Graph. Stat. 9:141-157.
    • (2000) J. Comput. Graph. Stat. , vol.9 , pp. 141-157
    • Raudenbush, S.W.1    Yang, M.-L.2    Yosef, M.3
  • 53
    • 0344097409 scopus 로고    scopus 로고
    • Estimating intraclass correlation for binary data
    • Ridout, M. S., Demétrio, C. G. B., and Firth, D. 1999. Estimating intraclass correlation for binary data. Biometrics 55:137-148.
    • (1999) Biometrics , vol.55 , pp. 137-148
    • Ridout, M.S.1    Demétrio, C.G.B.2    Firth, D.3
  • 54
    • 0042403790 scopus 로고    scopus 로고
    • On the correspondence between population-averaged models and a class of clusterspecific models for correlated binary data
    • Sashegyi, A. I., Brown, K. S., and Farrell, P. J. 2001. On the correspondence between population-averaged models and a class of clusterspecific models for correlated binary data. Stat. Prob. Lett. 52:135-144.
    • (2001) Stat. Prob. Lett. , vol.52 , pp. 135-144
    • Sashegyi, A.I.1    Brown, K.S.2    Farrell, P.J.3
  • 59
    • 10044254876 scopus 로고    scopus 로고
    • Some applications of generalized linear latent and mixed models in epidemiology: Repeated measures, measurement error and multilevel modeling
    • Skrondal, A., and Rabe-Hesketh, S. 2003. Some applications of generalized linear latent and mixed models in epidemiology: Repeated measures, measurement error and multilevel modeling. Nor. Epidemiol. 13:265-278.
    • (2003) Nor. Epidemiol. , vol.13 , pp. 265-278
    • Skrondal, A.1    Rabe-Hesketh, S.2
  • 60
    • 0030442550 scopus 로고    scopus 로고
    • Within-tree variability of mountain birch leaves causes variation in performance for Epirrita autumnata larvae
    • Suomela, J. 1996. Within-tree variability of mountain birch leaves causes variation in performance for Epirrita autumnata larvae. Vegetatio 127:77-83.
    • (1996) Vegetatio , vol.127 , pp. 77-83
    • Suomela, J.1
  • 61
    • 0035475306 scopus 로고    scopus 로고
    • Effect of scale on plant disease incidence and heterogeneity in a spatial hierarchy
    • Turechek, W. W., and Madden, L. V. 2001. Effect of scale on plant disease incidence and heterogeneity in a spatial hierarchy. Ecol. Model. 144:77- 95.
    • (2001) Ecol. Model. , vol.144 , pp. 77-95
    • Turechek, W.W.1    Madden, L.V.2
  • 62
    • 0035865954 scopus 로고    scopus 로고
    • Bayesian methods of analysis for cluster randomized trials with binary outcome data
    • Turner, R. M., Omar, R. Z., and Thompson, S. G. 2001. Bayesian methods of analysis for cluster randomized trials with binary outcome data. Stat. Med. 20:453-472.
    • (2001) Stat. Med. , vol.20 , pp. 453-472
    • Turner, R.M.1    Omar, R.Z.2    Thompson, S.G.3
  • 63
    • 33646266730 scopus 로고    scopus 로고
    • Constructing intervals for the intracluster correlation coefficient using Bayesian modeling, and application in cluster randomized trials
    • Turner, R. M., Omar, R. Z., and Thompson, S. G. 2006. Constructing intervals for the intracluster correlation coefficient using Bayesian modeling, and application in cluster randomized trials. Stat. Med. 25:1443- 1456.
    • (2006) Stat. Med. , vol.25 , pp. 1443-1456
    • Turner, R.M.1    Omar, R.Z.2    Thompson, S.G.3
  • 65
    • 18044382335 scopus 로고    scopus 로고
    • Meso- and microscale patterns of Fusarium head blight in spring wheat fields in Minnesota
    • Wilhelm, K. P., and Jones, R. K. 2005. Meso- and microscale patterns of Fusarium head blight in spring wheat fields in Minnesota. Plant Dis. 89:474-479.
    • (2005) Plant Dis. , vol.89 , pp. 474-479
    • Wilhelm, K.P.1    Jones, R.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.