Genetic diversity and similarity in the Barbarea vulgaris complex (Brassicaceae)

Nordic Journal of Botany

Volumn 30, Issue 4, 2012, Pages 506-512

  Toneatto, Fiorello ^a   Hauser, Thure P ^a   Nielsen, Jens Kvist ^a   Ørgaard, Marian ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

BEETLE; CLUSTER ANALYSIS; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; GENETIC MARKER; HERB; PLANT-HERBIVORE INTERACTION; POLYMORPHISM; POPULATION STRUCTURE; RELATEDNESS; TAXONOMY;

DENMARK;

EID: 84865326024     PISSN: 0107055X     EISSN: 17561051     Source Type: Journal    
DOI: 10.1111/j.1756-1051.2012.01546.x     Document Type: Article

References (45)

1. Agerbirk N. et al. 2001. Seasonal variation in leaf glucosinolates and insect resistance in two types of Barbarea vulgaris ssp. arcuata. - Phytochemistry 58: 91-100.
2. Agerbirk N. et al. 2003. Glucosinolates, flea beetle resistance, and leaf pubescence as taxonomic characters in the genus Barbarea (Brassicaceae). - Phytochemistry 63: 69-80.
3. Allen G. C. et al. 2006. A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide. - Nat. Prot. 1: 2320-2325.
4. Al-Shehbaz I. A. 1988. The genera of Arabideae (Cruciferae; Brassicaceae) in the southeastern United States. - J. Arn. Arbor. 69: 85-166.
5. Al-Shehbaz I. A. and Peng C. I. 2000. The genus Barbarea (Brassicaceae) in Taiwan. - Bot. Bull. Acad. Sin. 41: 237-242.
6. Al-Shehbaz I. A. et al. 2006. Systematics and phylogeny of the Brassicaceae (Cruciferae): an overview. - Plant Syst. Evol. 259: 89-120.
7. Ball P. W. et al. 1993. Barbarea R. Br. - In: Tutin T. G. et al. (eds), Flora Europaea, Cambridge University Press, Cambridge, pp. 342-343.
8. Bryant D. and Moulton V. 2004. Neighbor-net: an agglomerative method for the construction of phylogenetic networks. - Mol. Biol. Evol. 21: 255-265.
9. Bush N. A. 1939. Barbarea Beck. - In: Komarov V. L. (ed.), Flora SSSR. Israel program for scientific translations, 1970, 8: 99-102.
10. Couvreur T. L. P. et al. 2010. Molecular phylogenetics, temporal diversification and principles of evolution in the mustard family (Brassicaceae). - Mol. Biol. Evol. 27: 55-71.
11. Gort G. et al. 2006. Fragment length distributions and collision probabilities for AFLP markers. - Biometrics 62: 1107-1115.
12. Guillot G. et al. 2008. Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface. - Bioinformatics 24: 1406.
13. Hegi G. 1958. Illustrierte Flora von Mittel-Europa. - Carl Hauser Verlag.
14. Hennig C. and Hausdorf B. 2008. Prabclus: functions for clustering of presence-absence and abundance data. - R package ver. 2, 1-2.
15. Hewson H. J. 1982. Brassicaceae. - In: Briggs B. G. et al. (eds), Flora of Australia. Austr. Govt Publ. Serv., Canberra, pp. 231-357.
16. Huson D. H. and Bryant D. 2006. Application of phylogenetic networks in evolutionary studies. - Mol. Biol. Evol. 23: 254-267.
17. Ihaka R. and Gentleman R. 1996. R: a language for data analysis and graphics. - J. Comput. Graph. Stat. 5: 299-314.
18. Jensen J. 1985. Brassicaceae. - In: Hansen K. (ed.), Dansk Feltflora, Gyldendal, pp. 225-252.
19. Karrenberg S. and Favre A. 2008. Genetic and ecological differentiation in the hybridizing campions Silene dioica and S. latifolia. - Evolution 62: 763-773.
20. Koch M. et al. 2003. Molecular systematics, evolution, and population biology in the mustard family (Brassicaceae). - Ann. Miss. Bot. Gard. 90: 151-171.
21. Kruskal J. 1964. Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. - Psychometrika 29: 1-27.
22. Kuzina V. et al. 2009. Identification of defense compounds in Barbarea vulgaris against the herbivore Phyllotreta nemorum by an ecometabolomic approach. - Plant Physiol. 151: 1977-1990.
23. Kuzina V. et al. 2011. Barbarea vulgaris linkage map and quantitative trait loci for saponins, glucosinolates, hairiness and resistance to the herbivore Phyllotreta nemorum. - Phytochemistry 72: 188-198.
24. Lyshede O. 2012. Brassicaceae. - In: Frederiksen et al. (eds), Dansk Flora, Gyldendal, Copenhagen, pp. 421-454.
25. Mabberly D. J. 1997. The plant book. - Cambridge Univ. Press.
26. MacDonald M. A. and Cavers P. B. 1991. The biology of Canadian weeds: 97. Barbarea vulgaris R. Br. - Can. J. Plant Sci. 71: 149-166.
27. Marhold K. and Lihová J. 2006. Polyploidy, hybridization and reticulate evolution: lessons from the Brassicaceae. - Plant Syst. Evol. 259: 143-174.
28. Milne R. I. and Abbott R. J. 2008. Reproductive isolation among two interfertile Rhododendron species: low frequency of post F1 hybrid genotypes in alpine hybrid zones. - Mol. Ecol. 17: 1108-1121.
29. Mueller U. G. and Wolfenbarger L. L. R. 1999. AFLP genotyping and fingerprinting. - Trends Ecol. Evol. 14: 389-394.
30. Ørgaard M. and Linde-Laursen I. 2007. Cytogenetics of Danish species of Barbarea (Brassicaceae): chromocentres, chromosomes and rDNA sites. - Hereditas 144: 159-170.
31. Ørgaard M. and Linde-Laursen I. 2008. Meiotic analysis of Danish species of Barbarea (Brassicaceae) using FISH: chromosome numbers and rDNA sites. - Hereditas 145: 215-219.
32. Raymond M. and Rousset F. 1995. GENEPOP, ver. 3.2: a population genetics software for exact tests and ecumenicism. - J. Hered. 86: 248-249.
33. Rich T. and Dalby C. 1991. Crucifers of Great Britain and Ireland. - Bot. Soc. British Isles London.
34. Rieseberg L. H. 1997. Hybrid origins of plant species. - Annu. Rev. Ecol. Syst. 28: 359.
35. Saitou N. and Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. - Mol. Biol. Evol. 4: 406.
36. Smouse P. and Peakall R. 1999. Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. - Heredity 82: 561-573.
37. Stace C. 1997. New Flora of the British Isles, 2nd ed. Cambridge Univ. Press, pp. 243-281.
38. Teulat B. et al. 2000. An analysis of genetic diversity in coconut (Cocos nucifera) populations from across the geographic range using sequence-tagged microsatellites (SSRs) and AFLPs. - TAG 100: 764-771.
39. Toneatto F. et al. 2010. Genetic and sexual separation between insect resistant and susceptible Barbarea vulgaris plants in Denmark. - Mol. Ecol. 19: 3456-3465.
40. Vos P. et al. 1995. AFLP: a new technique for DNA fingerprinting. - Nucl. Acids Res. 23: 4407-4414.
41. Warwick S. I. and Al-Shehbaz I. A. 2006. Brassicaceae: chromosome number index and database on CD-rom. - Plant Syst. Evol. 259: 237-248.
42. Warwick S. I. and Sauder C. A. 2005. Phylogeny of tribe Brassiceae (Brassicaceae) based on chloroplast restriction site polymorphisms and nuclear ribosomal internal transcribed spacer and chloroplast trnL intron sequences. - Can. J. Bot. 83: 467-483.
43. Warwick S. I. et al. 2007. Phylogenetic relationships in the tribes Anchonieae, Chorisporeae, Euclidieae, and Hesperideae (Brassicaceae) based on nuclear ribosomal ITS sequences. - Ann. Miss. Bot. Gard. 94: 56-78.
44. Warwick S. I. et al. 2008. Phylogenetic relationships in the tribe Alysseae (Brassicaceae) based on nuclear ribosomal ITS sequences. - Bot.-Bot. 86: 315-336.
45. Warwick S. I. et al. 2010. Closing the gaps: phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS. - Plant Syst. Evol. 285: 209-232.