메뉴 건너뛰기




Volumn 12, Issue 6, 2012, Pages 625-636

Transcriptional regulation of fermentative and respiratory metabolism in Saccharomyces cerevisiae industrial bakers' strains

Author keywords

Bakers' yeast biomass; Catabolite derepressed mutant; Fermentation respiration regulation; Macroarray analysis

Indexed keywords

GLYOXYLIC ACID;

EID: 84865279954     PISSN: 15671356     EISSN: 15671364     Source Type: Journal    
DOI: 10.1111/j.1567-1364.2012.00813.x     Document Type: Article
Times cited : (17)

References (49)
  • 1
    • 33947493105 scopus 로고    scopus 로고
    • Hxk2 regulates the phosphorylation state of Mig1 and therefore its nucleocytoplasmic distribution
    • Ahuatzi D, Riera A, Pelaez R, Herrero P & Moreno F (2007) Hxk2 regulates the phosphorylation state of Mig1 and therefore its nucleocytoplasmic distribution. J Biol Chem 282: 4485-4493.
    • (2007) J Biol Chem , vol.282 , pp. 4485-4493
    • Ahuatzi, D.1    Riera, A.2    Pelaez, R.3    Herrero, P.4    Moreno, F.5
  • 3
    • 0031454272 scopus 로고    scopus 로고
    • Stress tolerance: the key to effective strains of industrial baker's yeast
    • Attfield PV (1997) Stress tolerance: the key to effective strains of industrial baker's yeast. Nat Biotechnol 15: 1351-1357.
    • (1997) Nat Biotechnol , vol.15 , pp. 1351-1357
    • Attfield, P.V.1
  • 4
    • 0037295310 scopus 로고    scopus 로고
    • The S. cerevisiae HAP complex, a key regulator of mitochondrial function, coordinates nuclear and mitochondrial gene expression
    • Buschlen S, Amillet JM, Guiard B, Fournier A, Marcireau C & Bolotin-Fukuhara M (2003) The S. cerevisiae HAP complex, a key regulator of mitochondrial function, coordinates nuclear and mitochondrial gene expression. Comp Funct Genomics 4: 37-46.
    • (2003) Comp Funct Genomics , vol.4 , pp. 37-46
    • Buschlen, S.1    Amillet, J.M.2    Guiard, B.3    Fournier, A.4    Marcireau, C.5    Bolotin-Fukuhara, M.6
  • 5
    • 0029586580 scopus 로고
    • Variability of the physiological features and of the nuclear and mitochondrial genomes of bakers' yeasts
    • Codon AC & Benitez T (1995) Variability of the physiological features and of the nuclear and mitochondrial genomes of bakers' yeasts. Syst Appl Microbiol 18: 343-352.
    • (1995) Syst Appl Microbiol , vol.18 , pp. 343-352
    • Codon, A.C.1    Benitez, T.2
  • 6
    • 0028891110 scopus 로고
    • Factors which affect the frequency of sporulation and tetrad formation in Saccharomyces cerevisiae baker's yeasts
    • Codon AC, Gasent-Ramirez JM & Benitez T (1995) Factors which affect the frequency of sporulation and tetrad formation in Saccharomyces cerevisiae baker's yeasts. Appl Environ Microbiol 61: 630-638.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 630-638
    • Codon, A.C.1    Gasent-Ramirez, J.M.2    Benitez, T.3
  • 7
    • 1842410122 scopus 로고    scopus 로고
    • Chromosomal reorganization during meiosis of Saccharomyces cerevisiae baker's yeasts
    • Codon AC, Benitez T & Korhola M (1997) Chromosomal reorganization during meiosis of Saccharomyces cerevisiae baker's yeasts. Curr Genet 32: 247-259.
    • (1997) Curr Genet , vol.32 , pp. 247-259
    • Codon, A.C.1    Benitez, T.2    Korhola, M.3
  • 8
    • 0031951769 scopus 로고    scopus 로고
    • Chromosomal polymorphism and adaptation to specific industrial environments of Saccharomyces strains
    • Codon AC, Benitez T & Korhola M (1998) Chromosomal polymorphism and adaptation to specific industrial environments of Saccharomyces strains. Appl Microbiol Biotechnol 49: 154-163.
    • (1998) Appl Microbiol Biotechnol , vol.49 , pp. 154-163
    • Codon, A.C.1    Benitez, T.2    Korhola, M.3
  • 9
    • 0037438912 scopus 로고    scopus 로고
    • New Saccharomyces cerevisiae baker's yeast displaying enhanced resistance to freezing
    • Codon AC, Rincon AM, Moreno-Mateos MA et al. (2003) New Saccharomyces cerevisiae baker's yeast displaying enhanced resistance to freezing. J Agric Food Chem 51: 483-491.
    • (2003) J Agric Food Chem , vol.51 , pp. 483-491
    • Codon, A.C.1    Rincon, A.M.2    Moreno-Mateos, M.A.3
  • 10
    • 1542350073 scopus 로고    scopus 로고
    • Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study
    • Daran-Lapujade P, Jansen ML, Daran JM, van Gulik W, de Winde JH & Pronk JT (2004) Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study. J Biol Chem 279: 9125-9138.
    • (2004) J Biol Chem , vol.279 , pp. 9125-9138
    • Daran-Lapujade, P.1    Jansen, M.L.2    Daran, J.M.3    van Gulik, W.4    de Winde, J.H.5    Pronk, J.T.6
  • 11
    • 0036078271 scopus 로고    scopus 로고
    • Activation of Ras cascade increases the mitochondrial enzyme content of respiratory competent yeast
    • Dejean L, Beauvoit B, Bunoust O, Guerin B & Rigoulet M (2002) Activation of Ras cascade increases the mitochondrial enzyme content of respiratory competent yeast. Biochem Biophys Res Commun 293: 1383-1388.
    • (2002) Biochem Biophys Res Commun , vol.293 , pp. 1383-1388
    • Dejean, L.1    Beauvoit, B.2    Bunoust, O.3    Guerin, B.4    Rigoulet, M.5
  • 12
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi JL, Iyer VR & Brown PO (1997) Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
    • (1997) Science , vol.278 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 14
    • 0038665162 scopus 로고    scopus 로고
    • Genome-wide expression analyses: metabolic adaptation of Saccharomyces cerevisiae to high sugar stress
    • Erasmus DJ, van der Merwe GK & van Vuuren HJ (2003) Genome-wide expression analyses: metabolic adaptation of Saccharomyces cerevisiae to high sugar stress. FEMS Yeast Res 3: 375-399.
    • (2003) FEMS Yeast Res , vol.3 , pp. 375-399
    • Erasmus, D.J.1    van der Merwe, G.K.2    van Vuuren, H.J.3
  • 15
    • 38949161446 scopus 로고    scopus 로고
    • Different requirements of the SWI/SNF complex for robust nucleosome displacement at promoters of heat shock factor and Msn2- and Msn4-regulated heat shock genes
    • Erkina TY, Tschetter PA & Erkine AM (2008) Different requirements of the SWI/SNF complex for robust nucleosome displacement at promoters of heat shock factor and Msn2- and Msn4-regulated heat shock genes. Mol Cell Biol 28: 1207-1217.
    • (2008) Mol Cell Biol , vol.28 , pp. 1207-1217
    • Erkina, T.Y.1    Tschetter, P.A.2    Erkine, A.M.3
  • 16
    • 0037472534 scopus 로고    scopus 로고
    • Metabolic flux analysis of RQ-controlled microaerobic ethanol production by Saccharomyces cerevisiae
    • Franzen CJ (2003) Metabolic flux analysis of RQ-controlled microaerobic ethanol production by Saccharomyces cerevisiae. Yeast 20: 117-132.
    • (2003) Yeast , vol.20 , pp. 117-132
    • Franzen, C.J.1
  • 17
    • 0036891750 scopus 로고    scopus 로고
    • The sensing of nutritional status and the relationship to filamentous growth in Saccharomyces cerevisiae
    • Gagiano M, Bauer FF & Pretorius IS (2002) The sensing of nutritional status and the relationship to filamentous growth in Saccharomyces cerevisiae. FEMS Yeast Res 2: 433-470.
    • (2002) FEMS Yeast Res , vol.2 , pp. 433-470
    • Gagiano, M.1    Bauer, F.F.2    Pretorius, I.S.3
  • 18
    • 44849104320 scopus 로고    scopus 로고
    • The early steps of glucose signalling in yeast
    • Gancedo JM (2008) The early steps of glucose signalling in yeast. FEMS Microbiol Rev 32: 673-704.
    • (2008) FEMS Microbiol Rev , vol.32 , pp. 673-704
    • Gancedo, J.M.1
  • 19
    • 0035808454 scopus 로고    scopus 로고
    • The transcriptional activator Cat8p provides a major contribution to the reprogramming of carbon metabolism during the diauxic shift in Saccharomyces cerevisiae
    • Haurie V, Perrot M, Mini T, Jeno P, Sagliocco F & Boucherie H (2001) The transcriptional activator Cat8p provides a major contribution to the reprogramming of carbon metabolism during the diauxic shift in Saccharomyces cerevisiae. J Biol Chem 276: 76-85.
    • (2001) J Biol Chem , vol.276 , pp. 76-85
    • Haurie, V.1    Perrot, M.2    Mini, T.3    Jeno, P.4    Sagliocco, F.5    Boucherie, H.6
  • 20
    • 70350512903 scopus 로고    scopus 로고
    • Identity of the growth-limiting nutrient strongly affects storage carbohydrate accumulation in anaerobic chemostat cultures of Saccharomyces cerevisiae
    • Hazelwood LA, Walsh MC, Luttik MA, Daran-Lapujade P, Pronk JT & Daran JM (2009) Identity of the growth-limiting nutrient strongly affects storage carbohydrate accumulation in anaerobic chemostat cultures of Saccharomyces cerevisiae. Appl Environ Microbiol 75: 6876-6885.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 6876-6885
    • Hazelwood, L.A.1    Walsh, M.C.2    Luttik, M.A.3    Daran-Lapujade, P.4    Pronk, J.T.5    Daran, J.M.6
  • 21
    • 77950214581 scopus 로고    scopus 로고
    • Lessons on longevity from budding yeast
    • Kaeberlein M (2010) Lessons on longevity from budding yeast. Nature 464: 513-519.
    • (2010) Nature , vol.464 , pp. 513-519
    • Kaeberlein, M.1
  • 22
    • 67149094723 scopus 로고    scopus 로고
    • Genome-wide fitness and expression profiling implicate Mga2 in adaptation to hydrogen peroxide
    • Kelley R & Ideker T (2009) Genome-wide fitness and expression profiling implicate Mga2 in adaptation to hydrogen peroxide. PLoS Genet 5: e1000488.
    • (2009) PLoS Genet , vol.5
    • Kelley, R.1    Ideker, T.2
  • 23
    • 70350443611 scopus 로고    scopus 로고
    • Systems-level engineering of nonfermentative metabolism in yeast
    • Kennedy CJ, Boyle PM, Waks Z & Silver PA (2009) Systems-level engineering of nonfermentative metabolism in yeast. Genetics 183: 385-397.
    • (2009) Genetics , vol.183 , pp. 385-397
    • Kennedy, C.J.1    Boyle, P.M.2    Waks, Z.3    Silver, P.A.4
  • 26
    • 1942505365 scopus 로고    scopus 로고
    • Overexpression of HAP4 in glucose-derepressed yeast cells reveals respiratory control of glucose-regulated genes
    • Lascaris R, Piwowarski J, van der Spek H, Teixeira de Mattos J, Grivell L & Blom J (2004) Overexpression of HAP4 in glucose-derepressed yeast cells reveals respiratory control of glucose-regulated genes. Microbiology 150: 929-934.
    • (2004) Microbiology , vol.150 , pp. 929-934
    • Lascaris, R.1    Piwowarski, J.2    van der Spek, H.3    Teixeira de Mattos, J.4    Grivell, L.5    Blom, J.6
  • 28
    • 0037020260 scopus 로고    scopus 로고
    • Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae
    • Piper MD, Daran-Lapujade P, Bro C, Regenberg B, Knudsen S, Nielsen J & Pronk JT (2002) Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae. J Biol Chem 277: 37001-37008.
    • (2002) J Biol Chem , vol.277 , pp. 37001-37008
    • Piper, M.D.1    Daran-Lapujade, P.2    Bro, C.3    Regenberg, B.4    Knudsen, S.5    Nielsen, J.6    Pronk, J.T.7
  • 29
    • 0343484970 scopus 로고    scopus 로고
    • Stress response and expression patterns in wine fermentations of yeast genes induced at the diauxic shift
    • Puig S & Perez-Ortin JE (2000) Stress response and expression patterns in wine fermentations of yeast genes induced at the diauxic shift. Yeast 16: 139-148.
    • (2000) Yeast , vol.16 , pp. 139-148
    • Puig, S.1    Perez-Ortin, J.E.2
  • 30
    • 0029112344 scopus 로고
    • The expression of a specific 2-deoxyglucose-6P phosphatase prevents catabolite repression mediated by 2-deoxyglucose in yeast
    • Randez-Gil F, Prieto JA & Sanz P (1995) The expression of a specific 2-deoxyglucose-6P phosphatase prevents catabolite repression mediated by 2-deoxyglucose in yeast. Curr Genet 28: 101-107.
    • (1995) Curr Genet , vol.28 , pp. 101-107
    • Randez-Gil, F.1    Prieto, J.A.2    Sanz, P.3
  • 31
    • 0033152146 scopus 로고    scopus 로고
    • Engineering baker's yeast: room for improvement
    • Randez-Gil F, Sanz P & Prieto JA (1999) Engineering baker's yeast: room for improvement. Trends Biotechnol 17: 237-244.
    • (1999) Trends Biotechnol , vol.17 , pp. 237-244
    • Randez-Gil, F.1    Sanz, P.2    Prieto, J.A.3
  • 32
    • 77951245389 scopus 로고    scopus 로고
    • Snf1 dependence of peroxisomal gene expression is mediated by Adr1
    • Ratnakumar S & Young ET (2010) Snf1 dependence of peroxisomal gene expression is mediated by Adr1. J Biol Chem 285: 10703-10714.
    • (2010) J Biol Chem , vol.285 , pp. 10703-10714
    • Ratnakumar, S.1    Young, E.T.2
  • 34
    • 0035461430 scopus 로고    scopus 로고
    • Improved properties of baker's yeast mutants resistant to 2-deoxy-D-glucose
    • Rincon AM, Codon AC, Castrejon F & Benitez T (2001) Improved properties of baker's yeast mutants resistant to 2-deoxy-D-glucose. Appl Environ Microbiol 67: 4279-4285.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4279-4285
    • Rincon, A.M.1    Codon, A.C.2    Castrejon, F.3    Benitez, T.4
  • 35
    • 79961218716 scopus 로고    scopus 로고
    • Transcriptional responses of Saccharomyces cerevisiae to shift from respiratory and respirofermentative to fully fermentative metabolism
    • Rintala E, Jouhten P, Toivari M, Wiebe MG, Maaheimo H, Penttilä M, Ruohonen L (2011) Transcriptional responses of Saccharomyces cerevisiae to shift from respiratory and respirofermentative to fully fermentative metabolism. OMICS 15: 461-476.
    • (2011) OMICS , vol.15 , pp. 461-476
    • Rintala, E.1    Jouhten, P.2    Toivari, M.3    Wiebe, M.G.4    Maaheimo, H.5    Penttilä, M.6    Ruohonen, L.7
  • 36
    • 33746060530 scopus 로고    scopus 로고
    • Transcriptome profiling of Saccharomyces cerevisiae during a transition from fermentative to glycerol-based respiratory growth reveals extensive metabolic and structural remodeling
    • Roberts GG & Hudson AP (2006) Transcriptome profiling of Saccharomyces cerevisiae during a transition from fermentative to glycerol-based respiratory growth reveals extensive metabolic and structural remodeling. Mol Genet Genomics 276: 170-186.
    • (2006) Mol Genet Genomics , vol.276 , pp. 170-186
    • Roberts, G.G.1    Hudson, A.P.2
  • 37
    • 0036272099 scopus 로고    scopus 로고
    • Gene expression analysis of cold and freeze stress in Baker's yeast
    • Rodriguez-Vargas S, Estruch F & Randez-Gil F (2002) Gene expression analysis of cold and freeze stress in Baker's yeast. Appl Environ Microbiol 68: 3024-3030.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3024-3030
    • Rodriguez-Vargas, S.1    Estruch, F.2    Randez-Gil, F.3
  • 38
    • 33746323958 scopus 로고    scopus 로고
    • Analysis of the genomic response of a wine yeast to rehydration and inoculation
    • Rossignol T, Postaire O, Storai J & Blondin B (2006) Analysis of the genomic response of a wine yeast to rehydration and inoculation. Appl Microbiol Biotechnol 71: 699-712.
    • (2006) Appl Microbiol Biotechnol , vol.71 , pp. 699-712
    • Rossignol, T.1    Postaire, O.2    Storai, J.3    Blondin, B.4
  • 40
    • 38349159600 scopus 로고    scopus 로고
    • Physiological and transcriptional characterization of Saccharomyces cerevisiae strains with modified expression of catabolic regulators
    • Schuurmans JM, Boorsma A, Lascaris R, Hellingwerf KJ & Teixeira de Mattos MJ (2008) Physiological and transcriptional characterization of Saccharomyces cerevisiae strains with modified expression of catabolic regulators. FEMS Yeast Res 8: 26-34.
    • (2008) FEMS Yeast Res , vol.8 , pp. 26-34
    • Schuurmans, J.M.1    Boorsma, A.2    Lascaris, R.3    Hellingwerf, K.J.4    Teixeira de Mattos, M.J.5
  • 41
    • 67651037266 scopus 로고    scopus 로고
    • Stress-tolerance of baker's-yeast (Saccharomyces cerevisiae) cells: stress-protective molecules and genes involved in stress tolerance
    • Shima J & Takagi H (2009) Stress-tolerance of baker's-yeast (Saccharomyces cerevisiae) cells: stress-protective molecules and genes involved in stress tolerance. Biotechnol Appl Biochem 53: 155-164.
    • (2009) Biotechnol Appl Biochem , vol.53 , pp. 155-164
    • Shima, J.1    Takagi, H.2
  • 42
    • 33747151594 scopus 로고    scopus 로고
    • Regulation of respiratory growth by Ras: the glyoxylate cycle mutant, cit2Delta, is suppressed by RAS2
    • Swiegers JH, Pretorius IS & Bauer FF (2006) Regulation of respiratory growth by Ras: the glyoxylate cycle mutant, cit2Delta, is suppressed by RAS2. Curr Genet 50: 161-171.
    • (2006) Curr Genet , vol.50 , pp. 161-171
    • Swiegers, J.H.1    Pretorius, I.S.2    Bauer, F.F.3
  • 43
    • 12844281816 scopus 로고    scopus 로고
    • Two-dimensional transcriptome analysis in chemostat cultures. Combinatorial effects of oxygen availability and macronutrient limitation in Saccharomyces cerevisiae
    • Tai SL, Boer VM, Daran-Lapujade P, Walsh MC, de Winde JH, Daran JM & Pronk JT (2005) Two-dimensional transcriptome analysis in chemostat cultures. Combinatorial effects of oxygen availability and macronutrient limitation in Saccharomyces cerevisiae. J Biol Chem 280: 437-447.
    • (2005) J Biol Chem , vol.280 , pp. 437-447
    • Tai, S.L.1    Boer, V.M.2    Daran-Lapujade, P.3    Walsh, M.C.4    de Winde, J.H.5    Daran, J.M.6    Pronk, J.T.7
  • 46
    • 74549132460 scopus 로고    scopus 로고
    • Transcriptional regulation of nonfermentable carbon utilization in budding yeast
    • Turcotte B, Liang XB, Robert F & Soontorngun N (2010) Transcriptional regulation of nonfermentable carbon utilization in budding yeast. FEMS Yeast Res 10: 2-13.
    • (2010) FEMS Yeast Res , vol.10 , pp. 2-13
    • Turcotte, B.1    Liang, X.B.2    Robert, F.3    Soontorngun, N.4
  • 48
    • 8144226244 scopus 로고    scopus 로고
    • Microarrays-status and prospects
    • Venkatasubbarao S (2004) Microarrays-status and prospects. Trends Biotechnol 22: 630-637.
    • (2004) Trends Biotechnol , vol.22 , pp. 630-637
    • Venkatasubbarao, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.