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Volumn 39, Issue 8, 2012, Pages 1219-1226

Red recombinase assisted gene replacement in Klebsiella pneumoniae

Author keywords

Gene replacement; Klebsiella pneumoniae; Red recombinase

Indexed keywords

DIHYDROXYACETONE KINASE II; DNA FRAGMENT; PLASMID DNA; PROTEIN KINASE; RECOMBINASE; RED RECOMBINASE; UNCLASSIFIED DRUG;

EID: 84865179697     PISSN: 13675435     EISSN: 14765535     Source Type: Journal    
DOI: 10.1007/s10295-012-1117-x     Document Type: Article
Times cited : (53)

References (28)
  • 1
    • 77954860039 scopus 로고    scopus 로고
    • Debottlenecking the 1,3-propanediol pathway by metabolic engineering
    • 20362657 10.1016/j.biotechadv.2010.03.003 1:CAS:528:DC%2BC3cXmtFantr0%3D
    • E Celinska 2010 Debottlenecking the 1,3-propanediol pathway by metabolic engineering Biotechnol Adv 28 4 519 530 20362657 10.1016/j.biotechadv.2010.03. 003 1:CAS:528:DC%2BC3cXmtFantr0%3D
    • (2010) Biotechnol Adv , vol.28 , Issue.4 , pp. 519-530
    • Celinska, E.1
  • 2
    • 0034668869 scopus 로고    scopus 로고
    • A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans
    • 11071951 10.1093/nar/28.22.e97 1:STN:280:DC%2BD3M%2FktFWhsQ%3D%3D
    • MK Chaveroche JM Ghigo C d'Enfert 2000 A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans Nucleic Acids Res 28 22 e97 11071951 10.1093/nar/28.22.e97 1:STN:280:DC%2BD3M%2FktFWhsQ%3D%3D
    • (2000) Nucleic Acids Res , vol.28 , Issue.22 , pp. 97
    • Chaveroche, M.K.1    Ghigo, J.M.2    D'Enfert, C.3
  • 3
    • 0029065955 scopus 로고
    • Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant
    • 7789817 10.1016/0378-1119(95)00193-A 1:CAS:528:DyaK2MXmvFClsb8%3D
    • PP Cherepanov W Wackernagel 1995 Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant Gene 158 1 9 14 7789817 10.1016/0378-1119(95) 00193-A 1:CAS:528:DyaK2MXmvFClsb8%3D
    • (1995) Gene , vol.158 , Issue.1 , pp. 9-14
    • Cherepanov, P.P.1    Wackernagel, W.2
  • 5
    • 0142059349 scopus 로고    scopus 로고
    • A rapid and simple method for inactivating chromosomal genes in Yersinia
    • DOI 10.1016/S0928-8244(03)00181-0
    • A Derbise B Lesic D Dacheux JM Ghigo E Carniel 2003 A rapid and simple method for inactivating chromosomal genes in Yersinia FEMS Immunol Med Microbiol 38 2 113 116 13129645 10.1016/S0928-8244(03)00181-0 1:CAS:528: DC%2BD3sXnt1Gmsro%3D (Pubitemid 37297836)
    • (2003) FEMS Immunology and Medical Microbiology , vol.38 , Issue.2 , pp. 113-116
    • Derbise, A.1    Lesic, B.2    Dacheux, D.3    Ghigo, J.M.4    Carniel, E.5
  • 6
    • 50849136478 scopus 로고    scopus 로고
    • Antibiotic marker modifications of [lambda] Red and FLP helper plasmids, pKD46 and pCP20, for inactivation of chromosomal genes using PCR products in multidrug-resistant strains
    • 18619499 10.1016/j.mimet.2008.06.010 1:CAS:528:DC%2BD1cXhtV2jtrzN
    • B Doublet G Douard H Targant D Meunier JY Madec A Cloeckaert 2008 Antibiotic marker modifications of [lambda] Red and FLP helper plasmids, pKD46 and pCP20, for inactivation of chromosomal genes using PCR products in multidrug-resistant strains J Microbiol Methods 75 2 359 361 18619499 10.1016/j.mimet.2008.06.010 1:CAS:528:DC%2BD1cXhtV2jtrzN
    • (2008) J Microbiol Methods , vol.75 , Issue.2 , pp. 359-361
    • Doublet, B.1    Douard, G.2    Targant, H.3    Meunier, D.4    Madec, J.Y.5    Cloeckaert, A.6
  • 8
    • 48249088509 scopus 로고    scopus 로고
    • Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice
    • 18654632 10.1371/journal.pgen.1000141
    • DE Fouts HL Tyler RT DeBoy S Daugherty Q Ren JH Badger AS Durkin H Huot S Shrivastava S Kothari 2008 Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice PLoS Genet 4 7 e1000141 18654632 10.1371/journal.pgen.1000141
    • (2008) PLoS Genet , vol.4 , Issue.7 , pp. 1000141
    • Fouts, D.E.1    Tyler, H.L.2    Deboy, R.T.3    Daugherty, S.4    Ren, Q.5    Badger, J.H.6    Durkin, A.S.7    Huot, H.8    Shrivastava, S.9    Kothari, S.10
  • 9
    • 77249146349 scopus 로고    scopus 로고
    • Consequences of cps mutation of Klebsiella pneumoniae on 1,3-propanediol fermentation
    • 19936735 10.1007/s00253-009-2342-8 1:CAS:528:DC%2BC3cXit1amsbo%3D
    • NN Guo ZM Zheng YL Mai HJ Liu DH Liu 2010 Consequences of cps mutation of Klebsiella pneumoniae on 1,3-propanediol fermentation Appl Microbiol Biotechnol 86 2 701 707 19936735 10.1007/s00253-009-2342-8 1:CAS:528:DC%2BC3cXit1amsbo%3D
    • (2010) Appl Microbiol Biotechnol , vol.86 , Issue.2 , pp. 701-707
    • Guo, N.N.1    Zheng, Z.M.2    Mai, Y.L.3    Liu, H.J.4    Liu, D.H.5
  • 10
  • 11
    • 48349134931 scopus 로고    scopus 로고
    • Isolation and characterization of microorganisms able to produce 1,3-propanediol under aerobic conditions
    • 10.1007/s11274-008-9665-y 1:CAS:528:DC%2BD1cXptVektbs%3D
    • J Hao R Lin Z Zheng H Liu D Liu 2008 Isolation and characterization of microorganisms able to produce 1,3-propanediol under aerobic conditions World J Microbiol Biotechnol 24 9 1731 1740 10.1007/s11274-008-9665-y 1:CAS:528:DC%2BD1cXptVektbs%3D
    • (2008) World J Microbiol Biotechnol , vol.24 , Issue.9 , pp. 1731-1740
    • Hao, J.1    Lin, R.2    Zheng, Z.3    Liu, H.4    Liu, D.5
  • 12
    • 77954689166 scopus 로고    scopus 로고
    • Inactivation of dhaD and dhaK abolishes by-product accumulation during 1,3-propanediol production in Klebsiella pneumoniae
    • 10.1007/s10295-010-0714-9
    • YT Horng KC Chang TC Chou CJ Yu CC Chien YH Wei PC Soo 2010 Inactivation of dhaD and dhaK abolishes by-product accumulation during 1,3-propanediol production in Klebsiella pneumoniae J Ind Microbiol Biotechnol 37 1 10 10.1007/s10295-010-0714-9
    • (2010) J Ind Microbiol Biotechnol , vol.37 , pp. 1-10
    • Horng, Y.T.1    Chang, K.C.2    Chou, T.C.3    Yu, C.J.4    Chien, C.C.5    Wei, Y.H.6    Soo, P.C.7
  • 13
    • 79952694448 scopus 로고    scopus 로고
    • Microbial 2,3-butanediol production: A state-of - The-art review
    • 21272631 10.1016/j.biotechadv.2011.01.007 1:CAS:528:DC%2BC3MXjs1WgtL4%3D
    • X Ji H Huang P Ouyang 2011 Microbial 2,3-butanediol production: a state-of-the-art review Biotechnol Adv 29 351 364 21272631 10.1016/j.biotechadv. 2011.01.007 1:CAS:528:DC%2BC3MXjs1WgtL4%3D
    • (2011) Biotechnol Adv , vol.29 , pp. 351-364
    • Ji, X.1    Huang, H.2    Ouyang, P.3
  • 14
    • 77951765932 scopus 로고    scopus 로고
    • Homologous overexpression of a lipase from Burkholderia cepacia using the lambda Red recombinase system
    • 20033831 10.1007/s10529-009-0189-9 1:CAS:528:DC%2BC3cXjtVCqsb4%3D
    • B Jia JK Yang WS Liu X Li YJ Yan 2010 Homologous overexpression of a lipase from Burkholderia cepacia using the lambda Red recombinase system Biotechnol Lett 32 4 521 526 20033831 10.1007/s10529-009-0189-9 1:CAS:528:DC%2BC3cXjtVCqsb4%3D
    • (2010) Biotechnol Lett , vol.32 , Issue.4 , pp. 521-526
    • Jia, B.1    Yang, J.K.2    Liu, W.S.3    Li, X.4    Yan, Y.J.5
  • 15
    • 65849386647 scopus 로고    scopus 로고
    • Use of the λ Red-recombineering method for genetic engineering of Pantoea ananatis
    • 19389224 10.1186/1471-2199-10-34
    • J Katashkina Y Hara L Golubeva I Andreeva T Kuvaeva S Mashko 2009 Use of the λ Red-recombineering method for genetic engineering of Pantoea ananatis BMC Mol Biol 10 1 34 19389224 10.1186/1471-2199-10-34
    • (2009) BMC Mol Biol , vol.10 , Issue.1 , pp. 34
    • Katashkina, J.1    Hara, Y.2    Golubeva, L.3    Andreeva, I.4    Kuvaeva, T.5    Mashko, S.6
  • 16
    • 0023785910 scopus 로고
    • Construction of multicopy expression vectors for regulated over-production of proteins in Klebsiella pneumoniae and other enteric bacteria
    • 3073188 1:CAS:528:DyaL1cXlsVeru7s%3D
    • D Kleiner W Paul MJ Merrick 1988 Construction of multicopy expression vectors for regulated over-production of proteins in Klebsiella pneumoniae and other enteric bacteria J Gen Microbiol 134 7 1779 3073188 1:CAS:528: DyaL1cXlsVeru7s%3D
    • (1988) J Gen Microbiol , vol.134 , Issue.7 , pp. 1779
    • Kleiner, D.1    Paul, W.2    Merrick, M.J.3
  • 17
    • 41549105328 scopus 로고    scopus 로고
    • Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa
    • DOI 10.1186/1471-2199-9-20
    • B Lesic L Rahme 2008 Use of the lambda Red recombinase system to rapidly generate mutants in Pseudomonas aeruginosa BMC Mol Biol 9 1 20 18248677 10.1186/1471-2199-9-20 (Pubitemid 351472502)
    • (2008) BMC Molecular Biology , vol.9 , pp. 20
    • Lesic, B.1    Rahme, L.G.2
  • 18
    • 0034603783 scopus 로고    scopus 로고
    • PCR-mediated gene replacement in Escherichia coli
    • DOI 10.1016/S0378-1119(00)00071-8, PII S0378111900000718
    • K Murphy K Campellone A Poteete 2000 PCR-mediated gene replacement in Escherichia coli Gene 246 1-2 321 330 10767554 10.1016/S0378-1119(00)00071-8 1:CAS:528:DC%2BD3cXitlers7Y%3D (Pubitemid 30190186)
    • (2000) Gene , vol.246 , Issue.1-2 , pp. 321-330
    • Murphy, K.C.1    Campellone, K.G.2    Poteete, A.R.3
  • 19
    • 0031924072 scopus 로고    scopus 로고
    • Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli
    • 9555887 1:CAS:528:DyaK1cXisVCgsb0%3D
    • KC Murphy 1998 Use of bacteriophage lambda recombination functions to promote gene replacement in Escherichia coli J Bacteriol 180 8 2063 9555887 1:CAS:528:DyaK1cXisVCgsb0%3D
    • (1998) J Bacteriol , vol.180 , Issue.8 , pp. 2063
    • Murphy, K.C.1
  • 20
    • 0031792165 scopus 로고    scopus 로고
    • Klebsiella spp. as nosocomial pathogens: Epidemiology, taxonomy, typing methods, and pathogenicity factors
    • 9767057 1:STN:280:DyaK1cvktVemtQ%3D%3D
    • R Podschun U Ullmann 1998 Klebsiella spp. as nosocomial pathogens: epidemiology, taxonomy, typing methods, and pathogenicity factors Clin Microbiol Rev 11 4 589 9767057 1:STN:280:DyaK1cvktVemtQ%3D%3D
    • (1998) Clin Microbiol Rev , vol.11 , Issue.4 , pp. 589
    • Podschun, R.1    Ullmann, U.2
  • 21
    • 69249222950 scopus 로고    scopus 로고
    • Elimination of by-product formation during production of 1,3-propanediol in Klebsiella pneumoniae by inactivation of glycerol oxidative pathway
    • 19352645 10.1007/s00253-009-1980-1 1:CAS:528:DC%2BD1MXhtVaitrrE
    • MY Seo JW Seo SY Heo JO Baek D Rairakhwada BR Oh PS Seo MH Choi CH Kim 2009 Elimination of by-product formation during production of 1,3-propanediol in Klebsiella pneumoniae by inactivation of glycerol oxidative pathway Appl Microbiol Biotechnol 84 3 527 534 19352645 10.1007/s00253-009-1980-1 1:CAS:528:DC%2BD1MXhtVaitrrE
    • (2009) Appl Microbiol Biotechnol , vol.84 , Issue.3 , pp. 527-534
    • Seo, M.Y.1    Seo, J.W.2    Heo, S.Y.3    Baek, J.O.4    Rairakhwada, D.5    Oh, B.R.6    Seo, P.S.7    Choi, M.H.8    Kim, C.H.9
  • 22
    • 33750445932 scopus 로고    scopus 로고
    • Use of the lambda Red recombinase system to produce recombinant prophages carrying antibiotic resistance genes
    • DOI 10.1186/1471-2199-7-31
    • R Serra-Moreno S Acosta J Hernalsteens J Jofre M Muniesa 2006 Use of the lambda Red recombinase system to produce recombinant prophages carrying antibiotic resistance genes BMC Mol Biol 7 1 31 16984631 10.1186/1471-2199-7-31 (Pubitemid 44649656)
    • (2006) BMC Molecular Biology , vol.7 , pp. 31
    • Serra-Moreno, R.1    Acosta, S.2    Hernalsteens, J.P.3    Jofre, J.4    Muniesa, M.5
  • 23
    • 77955560723 scopus 로고    scopus 로고
    • A mini-Mu transposon-based method for multiple DNA fragment integration into bacterial genomes
    • 20508928 10.1007/s00253-010-2674-4 1:CAS:528:DC%2BC3cXotVWmsL8%3D
    • XX Wei ZY Shi ZJ Li L Cai Q Wu GQ Chen 2010 A mini-Mu transposon-based method for multiple DNA fragment integration into bacterial genomes Appl Microbiol Biotechnol 87 4 1533 1541 20508928 10.1007/s00253-010-2674-4 1:CAS:528:DC%2BC3cXotVWmsL8%3D
    • (2010) Appl Microbiol Biotechnol , vol.87 , Issue.4 , pp. 1533-1541
    • Wei, X.X.1    Shi, Z.Y.2    Li, Z.J.3    Cai, L.4    Wu, Q.5    Chen, G.Q.6
  • 24
    • 67650324665 scopus 로고    scopus 로고
    • Genome sequencing and comparative analysis of Klebsiella pneumoniae NTUH-K2044, a strain causing liver abscess and meningitis
    • 19447910 10.1128/JB.00315-09 1:CAS:528:DC%2BD1MXosl2lsLg%3D
    • KM Wu LH Li JJ Yan N Tsao TL Liao HC Tsai CP Fung HJ Chen YM Liu JT Wang 2009 Genome sequencing and comparative analysis of Klebsiella pneumoniae NTUH-K2044, a strain causing liver abscess and meningitis J Bacteriol 191 14 4492 19447910 10.1128/JB.00315-09 1:CAS:528:DC%2BD1MXosl2lsLg%3D
    • (2009) J Bacteriol , vol.191 , Issue.14 , pp. 4492
    • Wu, K.M.1    Li, L.H.2    Yan, J.J.3    Tsao, N.4    Liao, T.L.5    Tsai, H.C.6    Fung, C.P.7    Chen, H.J.8    Liu, Y.M.9    Wang, J.T.10
  • 25
    • 70350532561 scopus 로고    scopus 로고
    • Metabolism in 1,3-propanediol fed-batch fermentation by a d-lactate deficient mutant of Klebsiella pneumoniae
    • 19572314 10.1002/bit.22455 1:CAS:528:DC%2BD1MXhtlSqs7vE
    • YZ Xu NN Guo ZM Zheng XJ Ou HJ Liu DH Liu 2009 Metabolism in 1,3-propanediol fed-batch fermentation by a d-lactate deficient mutant of Klebsiella pneumoniae Biotechnol Bioeng 104 5 965 972 19572314 10.1002/bit.22455 1:CAS:528:DC%2BD1MXhtlSqs7vE
    • (2009) Biotechnol Bioeng , vol.104 , Issue.5 , pp. 965-972
    • Xu, Y.Z.1    Guo, N.N.2    Zheng, Z.M.3    Ou, X.J.4    Liu, H.J.5    Liu, D.H.6
  • 26
    • 64749088255 scopus 로고    scopus 로고
    • Application of [lambda] Red recombination system to Vibrio cholerae genetics: Simple methods for inactivation and modification of chromosomal genes
    • 19268696 10.1016/j.gene.2009.02.015 1:CAS:528:DC%2BD1MXltVals7w%3D
    • S Yamamoto H Izumiya M Morita E Arakawa H Watanabe 2009 Application of [lambda] Red recombination system to Vibrio cholerae genetics: simple methods for inactivation and modification of chromosomal genes Gene 438 1-2 57 64 19268696 10.1016/j.gene.2009.02.015 1:CAS:528:DC%2BD1MXltVals7w%3D
    • (2009) Gene , vol.438 , Issue.12 , pp. 57-64
    • Yamamoto, S.1    Izumiya, H.2    Morita, M.3    Arakawa, E.4    Watanabe, H.5
  • 27
    • 33749436573 scopus 로고    scopus 로고
    • Inactivation of aldehyde dehydrogenase: A key factor for engineering 1,3-propanediol production by Klebsiella pneumoniae
    • DOI 10.1016/j.ymben.2006.05.008, PII S1096717606000450
    • Y Zhang Y Li C Du M Liu Z Cao 2006 Inactivation of aldehyde dehydrogenase: a key factor for engineering 1,3-propanediol production by Klebsiella pneumoniae Metab Eng 8 6 578 586 16931085 10.1016/j.ymben.2006.05.008 1:CAS:528:DC%2BD28XhtVyitLvI (Pubitemid 44512160)
    • (2006) Metabolic Engineering , vol.8 , Issue.6 , pp. 578-586
    • Zhang, Y.1    Li, Y.2    Du, C.3    Liu, M.4    Cao, Z.5
  • 28
    • 33749664737 scopus 로고    scopus 로고
    • Construction and characterization of double mutants in nitrogenase of Klebsiella pneumoniae
    • DOI 10.1360/03wc0165
    • D Zhao J Li 2004 Construction and characterization of double mutants in nitrogenase of Klebsiella pneumoniae Chin Sci Bull 49 16 1707 1713 1:CAS:528:DC%2BD2cXotlWrtbg%3D (Pubitemid 44552830)
    • (2004) Chinese Science Bulletin , vol.49 , Issue.16 , pp. 1707-1713
    • Zhao, D.1    Li, J.2


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