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Volumn 28, Issue 15, 2012, Pages 2074-2075

Dogsitescorer: A web server for automatic binding site prediction, analysis and druggability assessment

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

EID: 84865132980     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts310     Document Type: Article
Times cited : (402)

References (11)
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    • Brylinski, M.1    Skolnick, J.2
  • 2
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    • Identifying and characterizing binding sites and assessing druggability
    • Halgren,T. (2009) Identifying and characterizing binding sites and assessing druggability. J. Chem. Inf. Model., 49, 377-389.
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 377-389
    • Halgren, T.1
  • 3
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    • Probis: a web server for detection of structurally similar protein binding sites
    • Konc,J. and Janezic,D. (2010) Probis: a web server for detection of structurally similar protein binding sites. Nucleic Acids Res., 38, W436-W440.
    • (2010) Nucleic Acids Res. , vol.38
    • Konc, J.1    Janezic, D.2
  • 4
    • 84859747157 scopus 로고    scopus 로고
    • Sitecomp: a server for ligand binding site analysis in protein structures
    • Lin,Y. et al. (2012) Sitecomp: a server for ligand binding site analysis in protein structures. Bioinformatics (Oxford, England). 28, 1172-1173.
    • (2012) Bioinformatics (Oxford, England) , vol.28 , pp. 1172-1173
    • Lin, Y.1
  • 5
    • 77955397914 scopus 로고    scopus 로고
    • Understanding and predicting druggability. a highthroughput method for detection of drug binding sites
    • Schmidtke,P. and Barril,X. (2010) Understanding and predicting druggability. a highthroughput method for detection of drug binding sites. J. Med. Chem., 53, 5858-5867.
    • (2010) J. Med. Chem. , vol.53 , pp. 5858-5867
    • Schmidtke, P.1    Barril, X.2
  • 6
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    • fpocket: online tools for protein ensemble pocket detection and tracking
    • Schmidtke,P. et al. (2010) fpocket: online tools for protein ensemble pocket detection and tracking. Nucleic Acids Res., 38, W582-W589.
    • (2010) Nucleic Acids Res. , vol.38
    • Schmidtke, P.1
  • 7
    • 78649523910 scopus 로고    scopus 로고
    • Drug-like density: a method of quantifying the 'bindability' of a protein target based on a very large set of pockets and drug-like ligands from the protein data bank
    • Sheridan,R. et al. (2010) Drug-like density: a method of quantifying the 'bindability' of a protein target based on a very large set of pockets and drug-like ligands from the protein data bank. J. Chem. Inf. Model., 50, 2029-2040.
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 2029-2040
    • Sheridan, R.1
  • 8
    • 67849111559 scopus 로고    scopus 로고
    • Splitpocket: identification of protein functional surfaces and characterization of their spatial patterns
    • Tseng,Y. et al. (2009) Splitpocket: identification of protein functional surfaces and characterization of their spatial patterns. Nucleic Acids Res., 37, W384-W389.
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    • Tseng, Y.1
  • 9
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    • fpop: footprinting functional pockets of proteins by comparative spatial patterns
    • Tseng,Y. et al. (2010) fpop: footprinting functional pockets of proteins by comparative spatial patterns. Nucleic Acids Res., 38, D288-D295.
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    • Tseng, Y.1
  • 10
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    • Analyzing the topology of active sites: on the prediction of pockets and subpockets
    • Volkamer,A. et al. (2010) Analyzing the topology of active sites: on the prediction of pockets and subpockets. J. Chem. Inf. Model., 50, 2041-2052.
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 2041-2052
    • Volkamer, A.1
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    • Combining global and local measures for structure-based druggability predictions
    • Volkamer,A. et al. (2012) Combining global and local measures for structure-based druggability predictions. J. Chem. Inf. Model., 52, 360-372.
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.