-
1
-
-
0037435030
-
Mass spectrometry-based proteomics
-
Aebersold,R. and Mann,M. (2003) Mass spectrometry-based proteomics, Nature, 422, 198-207.
-
(2003)
Nature
, vol.422
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
2
-
-
0036866906
-
Apolipoprotein E kinetics: influence of insulin resistance and type 2 diabetes
-
Bach-Ngohou,K. et al. (2002) Apolipoprotein E kinetics: influence of insulin resistance and type 2 diabetes. Int. J. Obes., 26, 1451-1458.
-
(2002)
Int. J. Obes.
, vol.26
, pp. 1451-1458
-
-
Bach-Ngohou, K.1
-
3
-
-
0001677717
-
Controlling the false discovery rate: a practical and powerful approach to multiple testing, J
-
Benjamini,Y. and Hochberg,Y. (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing, J. R. Stat. Soc. B, 57, 289-300.
-
(1995)
R. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
5
-
-
0037276175
-
Statistical tests for differential expression in cDNA microarray experiments
-
Cui,X. and Churchill,G.A. (2003) Statistical tests for differential expression in cDNA microarray experiments, Genome Biol., 4, 210.
-
(2003)
Genome Biol.
, vol.4
, pp. 210
-
-
Cui, X.1
Churchill, G.A.2
-
6
-
-
32344442813
-
Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics
-
Callister,S.J. and Barry,R.C. et al. (2006) Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics. J. Proteome Res., 5, 277-286.
-
(2006)
J. Proteome Res.
, vol.5
, pp. 277-286
-
-
Callister, S.J.1
Barry, R.C.2
-
7
-
-
79956130567
-
Association of the clustering gene polymorphisms with type 2 diabetes mellitus
-
Daimon,M. et al. (2011) Association of the clustering gene polymorphisms with type 2 diabetes mellitus. Metabolism, 60, 815-822.
-
(2011)
Metabolism
, vol.60
, pp. 815-822
-
-
Daimon, M.1
-
8
-
-
33747400963
-
Clinical proteomics: the promises and challenges of mass spectrometry-based biomarker discovery
-
deVera,I.E. et al. (2006) Clinical proteomics: the promises and challenges of mass spectrometry-based biomarker discovery. Clin. Adv. Hematol. Oncol., 4, 541-549.
-
(2006)
Clin. Adv. Hematol. Oncol.
, vol.4
, pp. 541-549
-
-
deVera, I.E.1
-
9
-
-
78650135980
-
Increased power for the analysis of label-free LC-MS/MS proteomics data by combining spectral counts and peptide peak attribution
-
Dicker,L. et al. (2010) Increased power for the analysis of label-free LC-MS/MS proteomics data by combining spectral counts and peptide peak attribution. Mol. Cell. Proteomics, 9, 2704-2718.
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 2704-2718
-
-
Dicker, L.1
-
10
-
-
33751340274
-
Comparison of spectral counting and metabolic stable isotope labeling for use with quantitative microbial proteomics
-
Hendrickson,E.L. et al. (2006) Comparison of spectral counting and metabolic stable isotope labeling for use with quantitative microbial proteomics. Analyst, 131, 1335- 1341.
-
(2006)
Analyst
, vol.131
-
-
Hendrickson, E.L.1
-
11
-
-
84865116995
-
Nonparametric Statistical Methods, 2nd edn.Wiley Interscience, New York.
-
Hollander,J. andWolfe,D.A. (1999) Nonparametric Statistical Methods, 2nd edn.Wiley Interscience, New York.
-
(1999)
-
-
Hollander, J.1
Wolfe, D.A.2
-
12
-
-
27944450456
-
DNA microarray data imputation and significance analysis of differential expression
-
Jornsten,R. et al. (2005) DNA microarray data imputation and significance analysis of differential expression. Bioinformatics, 21, 4155-4161.
-
(2005)
Bioinformatics
, vol.21
, pp. 4155-4161
-
-
Jornsten, R.1
-
13
-
-
68549137863
-
Astatistical framework for protein quantitation in bottom-up MS-based proteomics
-
Karpievitch,Y. et al. (2009)Astatistical framework for protein quantitation in bottom-up MS-based proteomics. Bioinformatics, 25, 2028-2034.
-
(2009)
Bioinformatics
, vol.25
, pp. 2028-2034
-
-
Karpievitch, Y.1
-
14
-
-
84856040216
-
Liquid chromatography mass spectrometry-based proteomics: biological and technical aspects
-
Karpievitch,Y.V. et al. (2010) Liquid chromatography mass spectrometry-based proteomics: biological and technical aspects. Ann. Appl. Stat., 4, 1797-1823.
-
(2010)
Ann. Appl. Stat.
, vol.4
, pp. 1797-1823
-
-
Karpievitch, Y.V.1
-
16
-
-
33645461851
-
PRISM: a data management system for high-throughput proteomics
-
Kiebel,G. et al. (2006) PRISM: a data management system for high-throughput proteomics. Proteomics, 6, 1783-1790.
-
(2006)
Proteomics
, vol.6
, pp. 1783-1790
-
-
Kiebel, G.1
-
18
-
-
39749141692
-
Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset
-
Metz,T.O. et al. (2008) Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset. J. Proteome Res., 7, 698-707.
-
(2008)
J. Proteome Res.
, vol.7
, pp. 698-707
-
-
Metz, T.O.1
-
19
-
-
0242643743
-
A Bayesian missing value estimation method for gene expression profile data
-
Oba,S. et al. (2003) A Bayesian missing value estimation method for gene expression profile data. Bioinformatics, 19, 2088-2096.
-
(2003)
Bioinformatics
, vol.19
, pp. 2088-2096
-
-
Oba, S.1
-
20
-
-
0026687633
-
Maximum likelihood estimation for interval-censored data using a Weibull-based accelerated failure time model
-
Odell,P.M. et al. (1992) Maximum likelihood estimation for interval-censored data using a Weibull-based accelerated failure time model. Biometrics, 48, 951-959.
-
(1992)
Biometrics
, vol.48
, pp. 951-959
-
-
Odell, P.M.1
-
21
-
-
2342426727
-
Gaussian mixture clustering and imputation of microarray data
-
Ouyang,M. et al. (2004) Gaussian mixture clustering and imputation of microarray data. Bioinformatics, 20, 917-923.
-
(2004)
Bioinformatics
, vol.20
, pp. 917-923
-
-
Ouyang, M.1
-
22
-
-
6344280371
-
Proteomic analyses using an accurate mass and time tag strategy
-
Pasa-Tolic,L. et al. (2004) Proteomic analyses using an accurate mass and time tag strategy. BioTechniques, 37, 621-636.
-
(2004)
BioTechniques
, vol.37
, pp. 621-636
-
-
Pasa-Tolic, L.1
-
23
-
-
79952445421
-
Statistical optimization of parametric accelerated failure timemodel for mapping survival trait loci
-
Piao,Z. et al. (2011) Statistical optimization of parametric accelerated failure timemodel for mapping survival trait loci. Theor. Appl. Genet., 122, 855-863.
-
(2011)
Theor. Appl. Genet.
, vol.122
, pp. 855-863
-
-
Piao, Z.1
-
24
-
-
46249116675
-
DAnTE: a statistical tool for quantitative analysis of -omics data
-
Polpitiya,A.D. et al. (2008) DAnTE: a statistical tool for quantitative analysis of -omics data. Bioinformatics, 24, 1556-1558.
-
(2008)
Bioinformatics
, vol.24
, pp. 1556-1558
-
-
Polpitiya, A.D.1
-
25
-
-
33645968666
-
Talin immunogold density increases in sciatic nerve of diabetic rats after nerve growth factor treatment
-
Renno,W.M. et al. (2006) Talin immunogold density increases in sciatic nerve of diabetic rats after nerve growth factor treatment. Mediciana (Kaunas), 42, 147-163.
-
(2006)
Mediciana (Kaunas)
, vol.42
, pp. 147-163
-
-
Renno, W.M.1
-
26
-
-
34249847958
-
pcaMethods-a bioconductor package providing PCAmethods for incomplete data
-
Stacklies,W. et al. (2007) pcaMethods-a bioconductor package providing PCAmethods for incomplete data. Bioinformatics, 23, 9.
-
(2007)
Bioinformatics
, vol.23
, pp. 9
-
-
Stacklies, W.1
-
27
-
-
0036020892
-
A direct approach to false discovery rates
-
Storey,J.D. (2002) A direct approach to false discovery rates. J.R. Stat. Soc. B, 64, 479-498.
-
(2002)
J.R. Stat. Soc. B
, vol.64
, pp. 479-498
-
-
Storey, J.D.1
-
28
-
-
13244299122
-
Comparing transformation methods for DNA microarray data
-
Thygeson,H.H. and Zwinderman,A.H. (2004) Comparing transformation methods for DNA microarray data. BMC Bioinformatics, 5, 77.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 77
-
-
Thygeson, H.H.1
Zwinderman, A.H.2
-
29
-
-
0034960264
-
Missing value estimation methods for DNA microarrays
-
Troyanskaya,O. et al. (2001) Missing value estimation methods for DNA microarrays. Bioinformatics, 17, 520-525.
-
(2001)
Bioinformatics
, vol.17
, pp. 520-525
-
-
Troyanskaya, O.1
-
30
-
-
51649124498
-
Calculating absolute and relative protein abundance from mass spectrometry-based protein expression data
-
Vogel,C. and Marcotte,E. (2008) Calculating absolute and relative protein abundance from mass spectrometry-based protein expression data. Nat. Protoc., 3, 1441-1451.
-
(2008)
Nat. Protoc.
, vol.3
, pp. 1441-1451
-
-
Vogel, C.1
Marcotte, E.2
-
31
-
-
33646264529
-
Advances in proteomics data analysis and display using an accurate mass and time tag strategy
-
Zimmer,M.E. et al. (2006) Advances in proteomics data analysis and display using an accurate mass and time tag strategy. Mass Spectrom. Rev., 23, 450-482.
-
(2006)
Mass Spectrom. Rev.
, vol.23
, pp. 450-482
-
-
Zimmer, M.E.1
-
32
-
-
74049115774
-
Mass spectrometry-based label-free quantitative proteomics
-
Zhu,W. et al. (2009) Mass spectrometry-based label-free quantitative proteomics, J. Biom. Biotechnol., 2010, 840518.
-
(2009)
J. Biom. Biotechnol.
, vol.2010
, pp. 840518
-
-
Zhu, W.1
|