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Volumn 36, Issue 6, 2012, Pages 549-560

Biases and Errors on Allele Frequency Estimation and Disease Association Tests of Next-Generation Sequencing of Pooled Samples

Author keywords

Allele frequency estimation; Disease association tests; Next generation sequencing; Pooled sequencing

Indexed keywords

ACCURACY; ARTICLE; DISEASE ASSOCIATION; GENE FREQUENCY; GENE SEQUENCE; GENOTYPE; HUMAN; NEXT GENERATION SEQUENCING; POLYMERASE CHAIN REACTION; SAMPLING ERROR; SINGLE NUCLEOTIDE POLYMORPHISM; WORKFLOW;

EID: 84865075699     PISSN: 07410395     EISSN: 10982272     Source Type: Journal    
DOI: 10.1002/gepi.21648     Document Type: Article
Times cited : (22)

References (16)
  • 1
    • 79957582993 scopus 로고    scopus 로고
    • Next generation sequencing of pooled samples reveals new SNRNP200 mutations associated with retinitis pigmentosa
    • Benaglio P, McGee TL, Capelli LP, Harper S, Berson EL, Rivolta C. 2011. Next generation sequencing of pooled samples reveals new SNRNP200 mutations associated with retinitis pigmentosa. Hum Mutat 32(6):E2246-E2258.
    • (2011) Hum Mutat , vol.32 , Issue.6
    • Benaglio, P.1    McGee, T.L.2    Capelli, L.P.3    Harper, S.4    Berson, E.L.5    Rivolta, C.6
  • 4
    • 79952537199 scopus 로고    scopus 로고
    • On optimal pooling designs to identify rare variants through massive resequencing
    • Lee JS, Choi M, Yan X, Lifton RP, Zhao H. 2011. On optimal pooling designs to identify rare variants through massive resequencing. Genet Epidemiol 35(3):139-147.
    • (2011) Genet Epidemiol , vol.35 , Issue.3 , pp. 139-147
    • Lee, J.S.1    Choi, M.2    Yan, X.3    Lifton, R.P.4    Zhao, H.5
  • 6
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25(14):1754-1760.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 8
    • 79956314887 scopus 로고    scopus 로고
    • Genotype and SNP calling from next-generation sequencing data
    • Nielsen R, Paul JS, Albrechtsen A, Song YS. 2011. Genotype and SNP calling from next-generation sequencing data. Nat Rev Genet 12(6):443-451.
    • (2011) Nat Rev Genet , vol.12 , Issue.6 , pp. 443-451
    • Nielsen, R.1    Paul, J.S.2    Albrechtsen, A.3    Song, Y.S.4
  • 11
    • 54949137701 scopus 로고    scopus 로고
    • MetaSim: a sequencing simulator for genomics and metagenomics
    • Richter DC, Ott F, Auch AF, Schmid R, Huson DH. 2008. MetaSim: a sequencing simulator for genomics and metagenomics. PLoS One 3(10):e3373.
    • (2008) PLoS One , vol.3 , Issue.10
    • Richter, D.C.1    Ott, F.2    Auch, A.F.3    Schmid, R.4    Huson, D.H.5
  • 16
    • 77954194389 scopus 로고    scopus 로고
    • Resequencing of pooled DNA for detecting disease associations with rare variants
    • Wang T, Lin CY, Rohan TE, Ye K. 2010. Resequencing of pooled DNA for detecting disease associations with rare variants. Genet Epidemiol 34(5):492-501.
    • (2010) Genet Epidemiol , vol.34 , Issue.5 , pp. 492-501
    • Wang, T.1    Lin, C.Y.2    Rohan, T.E.3    Ye, K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.