-
1
-
-
80053453491
-
Separation of recombination and SOS response in escherichia coli RecA suggests LexA interaction sites
-
Adikesavan, A.K. et al. (2011) Separation of recombination and SOS response in escherichia coli RecA suggests LexA interaction sites. PLoS Genet., 7, e1002244.
-
(2011)
PLoS Genet
, vol.7
-
-
Adikesavan, A.K.1
-
2
-
-
0033954256
-
The protein data bank
-
Berman, H.M. et al. (2000) The protein data bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
-
3
-
-
79953077647
-
Protein function prediction: towards integration of similarity metrics
-
Erdin, S. et al. (2011) Protein function prediction: towards integration of similarity metrics. Curr. Opin. Struct. Biol., 21, 180-188.
-
(2011)
Curr. Opin. Struct. Biol.
, vol.21
, pp. 180-188
-
-
Erdin, S.1
-
4
-
-
77957352833
-
Jmol a paradigm shift in crystallographic visualization
-
Hanson, R.M. (2010) Jmol a paradigm shift in crystallographic visualization. J. Appl. Crystallogr., 43, 1250-1260.
-
(2010)
J. Appl. Crystallogr.
, vol.43
, pp. 1250-1260
-
-
Hanson, R.M.1
-
5
-
-
38849090164
-
Prediction of enzyme function based on 3D templates of evolutionarily important amino acids
-
Kristensen, D.M. et al. (2008) Prediction of enzyme function based on 3D templates of evolutionarily important amino acids. BMC Bioinformatics, 9, 17.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 17
-
-
Kristensen, D.M.1
-
6
-
-
22544441094
-
ProFunc: a server for predicting protein function from 3D structure
-
Laskowski, R.A. et al. (2005) ProFunc: a server for predicting protein function from 3D structure. Nucleic Acids Res., 33, W89-W93.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Laskowski, R.A.1
-
8
-
-
0029913807
-
An evolutionary trace method defines binding surfaces common to protein families
-
Lichtarge, O. et al. (1996) An evolutionary trace method defines binding surfaces common to protein families. J. Mol. Biol., 257, 342-358.
-
(1996)
J. Mol. Biol.
, vol.257
, pp. 342-358
-
-
Lichtarge, O.1
-
9
-
-
78449311309
-
PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes
-
Lua, R.C. and Lichtarge, O. (2010) PyETV: a PyMOL evolutionary trace viewer to analyze functional site predictions in protein complexes. Bioinformatics, 26, 2981-2982.
-
(2010)
Bioinformatics
, vol.26
, pp. 2981-2982
-
-
Lua, R.C.1
Lichtarge, O.2
-
10
-
-
1242339659
-
A family of evolution-entropy hybrid methods for ranking protein residues by importance
-
Mihalek, I. et al. (2004) A family of evolution-entropy hybrid methods for ranking protein residues by importance. J. Mol. Biol., 336, 1265-1282.
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 1265-1282
-
-
Mihalek, I.1
-
11
-
-
44949122425
-
Exploring the structure and function paradigm
-
Redfern, O.C. et al. (2008) Exploring the structure and function paradigm. Curr. Opin. Struct. Biol., 18, 394-402.
-
(2008)
Curr. Opin. Struct. Biol.
, vol.18
, pp. 394-402
-
-
Redfern, O.C.1
-
12
-
-
70049101758
-
FLORA: a novel method to predict protein function from structure in diverse superfamilies
-
Redfern, O.C. et al. (2009) FLORA: a novel method to predict protein function from structure in diverse superfamilies. PLoS Comput. Biol., 5, e1000485.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Redfern, O.C.1
-
13
-
-
19544369864
-
An evolution based classifier for prediction of protein interfaces without using protein structures
-
Res, I. et al. (2005) An evolution based classifier for prediction of protein interfaces without using protein structures. Bioinformatics, 21, 2496-2501.
-
(2005)
Bioinformatics
, vol.21
, pp. 2496-2501
-
-
Res, I.1
-
14
-
-
77952356281
-
Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors
-
Rodriguez, G.J. et al. (2010) Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors. Proc. Nat. Acad. Sci., 107, 7787-7792.
-
(2010)
Proc. Nat. Acad. Sci.
, vol.107
, pp. 7787-7792
-
-
Rodriguez, G.J.1
-
15
-
-
79551587720
-
Cytoscape 2.8: new features for data integration and network visualization
-
Smoot, M.E. et al. (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics, 27, 431-432.
-
(2011)
Bioinformatics
, vol.27
, pp. 431-432
-
-
Smoot, M.E.1
-
16
-
-
20444456581
-
Automatic annotation of protein function
-
Valencia, A. (2005) Automatic annotation of protein function. Curr. Opin. Struct. Biol., 15, 267-274.
-
(2005)
Curr. Opin. Struct. Biol.
, vol.15
, pp. 267-274
-
-
Valencia, A.1
-
17
-
-
78650798477
-
Accurate protein structure annotation through competitive diffusion of enzymatic functions over a network of local evolutionary similarities
-
Venner, E. et al. (2010) Accurate protein structure annotation through competitive diffusion of enzymatic functions over a network of local evolutionary similarities. PLoS ONE, 5, e14286.
-
(2010)
PLoS ONE
, vol.5
-
-
Venner, E.1
-
18
-
-
47849086673
-
De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural features
-
Ward, R.M. et al. (2008) De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural features. PloS ONE, 3, e2136.
-
(2008)
PloS ONE
, vol.3
-
-
Ward, R.M.1
-
19
-
-
65649110443
-
Evolutionary trace annotation server: automated enzyme function prediction in protein structures using 3D templates
-
Ward, R.M. et al. (2009) Evolutionary trace annotation server: automated enzyme function prediction in protein structures using 3D templates. Bioinformatics, 25, 1426-1427.
-
(2009)
Bioinformatics
, vol.25
, pp. 1426-1427
-
-
Ward, R.M.1
|