Heat treatment of peach fruit: Modifications in the extracellular compartment and identification of novel extracellular proteins

Plant Physiology and Biochemistry

Volumn 60, Issue , 2012, Pages 35-45

  Bustamante, Claudia A ^a   Budde, Claudio O ^b   Borsani, Julia ^a   Lombardo, Verónica A ^a   Lauxmann, Martin A ^a,c   Andreo, Carlos S ^a   Lara, María V ^a   Drincovich, María F ^a  

^a UNIVERSIDAD NACIONAL DE ROSARIO   (Argentina)

^b INSTITUTO NACIONAL DE TECNOLOGÍA AGROPECUARIA INTA   (Argentina)

^c MAX PLANCK INSTITUTE OF MOLECULAR PLANT PHYSIOLOGY   (Germany)

Author keywords

Cell wall; DUF642; GAPC; Heat treatment; Peach; Post harvest; Prunus persica

Indexed keywords

1 AMINOCYCLOPROPANE 1 CARBOXYLIC ACID OXIDASE; 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; MESSENGER RNA; OXIDOREDUCTASE; PLANT RNA; PROTEOME; VEGETABLE PROTEIN;

ARTICLE; CELL WALL; CYTOLOGY; DOWN REGULATION; ENZYMOLOGY; EXTRACELLULAR SPACE; FRUIT; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENETICS; HEAT; METABOLISM; PHENOTYPE; PROTEOMICS; PRUNUS; SECRETION (PROCESS); TANDEM MASS SPECTROMETRY; TOMATO; TWO DIMENSIONAL GEL ELECTROPHORESIS; UPREGULATION;

AMINO ACID OXIDOREDUCTASES; CELL WALL; DOWN-REGULATION; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; EXTRACELLULAR SPACE; FRUIT; GENE EXPRESSION; GENE EXPRESSION REGULATION, PLANT; GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASES; HOT TEMPERATURE; LYCOPERSICON ESCULENTUM; PHENOTYPE; PLANT PROTEINS; PROTEOME; PROTEOMICS; PRUNUS; RNA, MESSENGER; RNA, PLANT; TANDEM MASS SPECTROMETRY; UP-REGULATION;

LYCOPERSICON ESCULENTUM; PRUNUS PERSICA;

EID: 84864957828     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2012.07.021     Document Type: Article

References (39)

1. Brummell D.A., Harpster M.H. Cell wall metabolism in fruit softening and quality and its manipulation in transgenic plants. Plant Mol. Biol. 2001, 47:311-340.
2. Brummell D.A., Dal Cin V., Crisosto C.H., Labavitch J.M. Cell wall metabolism during maturation, ripening and senescence of peach fruit. J. Exp. Bot. 2004, 55:2029-2039.
3. Lurie S., Crisosto C.H. Chilling injury in peach and nectarine. Postharvest Biol. Technol. 2005, 37:195-208.
4. Brummell D.A., Dal Cin V., Lurie S., Crisosto C.H., Labavitch J.M. Cell wall metabolism during the development of chilling injury in cold-stored peach fruit: association of mealiness with arrested disassembly of cell wall pectins. J. Exp. Bot. 2004, 55:2041-2052.
5. Lurie S. Postharvest heat treatments. Postharvest Biol. Technol. 1998, 14:257-269.
6. Lara M.V., Borsani J., Budde C.O., Lauxmann M.A., Lombardo V.A., Murray R., Andreo C.S., Drincovich M.F. Biochemical and proteomic analysis of 'Dixiland' peach fruit (Prunus persica) upon heat treatment. J. Exp. Bot. 2009, 60:4315-4333.
7. Dagar A., Friedman H., Lurie S. Thaumatin-like proteins and their possible role in protection against chilling injury in peach fruit. Postharvest Biol. Technol. 2010, 57:77-85.
8. Lee S.J., Saravanan R.S., Damasceno C.M.B., Yamane H., Kim B.D., Rose J.K.C. Digging deeper into the plant cell proteome. Plant Physiol. Biochem. 2004, 42:979-988.
9. Borsani J., Budde C., Porrini L., Lauxmann M.A., Lombardo V.A., Murray R., Andreo C.S., Drincovich M.F., Lara M.V. Carbon metabolism of peach fruit after harvest: identification of key enzymes involved in organic acid and sugar level modifications. J. Exp. Bot. 2009, 60:1823-1837.
10. Hayama H., Shimada T., Fujii H., Ito A., Kashimura Y. Ethylene-regulation of fruit softening and softening-related genes in peach. J. Exp. Bot. 2006, 57:4071-4077.
11. Trainotti L., Zanin D., Casadoro G. A cell wall-oriented genomic approach reveals a new and unexpected complexity of the softening of peaches. J. Exp. Bot. 2003, 54:1821-1832.
12. Murayama H., Arikawa M., Sasaki Y., Dal Cin V., Mitsuhashi W., Toyomasu T. Postharvest Biol. Technol. 2009, 52:196-201.
13. Chen X.Y., Kim S.T., Cho W.K., Rim Y., Kim S., Kim S.W., Kang K.Y., Park Z.Y., Kim J.Y. Proteomics of weakly bound cell wall proteins in rice calli. J. Plant Physiol. 2009, 166:675-685.
14. Rius S.P., Casati P., Iglesias A.A., Gomez-Casati D.F. Characterization of Arabidopsis lines deficient in GAPC-1, a cytosolic NAD-dependent glyceraldehydes-3-phosphate dehydrogenase. Plant Physiol. 2008, 148:1655-1667.
15. Albert V.A., Soltis D.E., Carlson J.E., Farmerie W.G., Wall P.K., Ilut D.C., Solow T.M., Mueller L.A., Landherr L.L., Hu Y., Buzgo M., Kim S., Yoo M.J., Frohlich M.W., Perl-Treves R., Schlarbaum S.E., Bliss B.J., Zhang X., Tanksley S.D., Oppenheimer D.G., Soltis P.S., Ma H., dePamphilis C.W., Leebens-Mack J.H. Floral genes resources from basal angiosperms for comparative genomics research. BMC Plant Biol. 2005, 5:5.
16. Budde C.O., Polenta G., Lucangeli C.D., Murray R.E. Air and immersion heat treatments affect ethylene production and organoleptic quality of 'Dixiland' peaches. Postharvest Biol. Technol. 2006, 41:32-37.
17. Trainotti L., Tadiello A., Casadoro G. The involvement of auxin in the ripening of climacteric fruits comes of age: the hormone plays a role of its own and has an intense interplay with ethylene in ripening peaches. J. Exp. Bot. 2007, 58:3299-3308.
18. Hancock J.T., Henson D., Nyirenda M., Desikan R., Harrison J., Lewis M., Hughes J., Neill S.J. Proteomic identification of glyceraldehyde 3-phosphate dehydrogenase as an inhibitory target of hydrogen peroxide in Arabidopsis. Plant Physiol. Biochem. 2005, 43:828-835.
19. Negri A.S., Prinsi B., Scienza A., Morgutti S., Cocucci M., Espen L. Analysis of grape berry cell wall proteome: a comparative evaluation of extraction methods. J. Plant Physiol. 2008, 165:1379-1389.
20. Chivasa S., Ndimba B.K., Simon W.J., Robertson D., Yu X., Knox J.P., Bolwell P., Slabas A. Proteomic analysis of the Arabidopsis thaliana cell wall. Electrophoresis 2002, 13:1754-1765.
21. Gokulakannan G.G., Niehaus K. Characterization of the Medicago truncatula cell wall proteome in cell suspension culture upon elicitation and suppression of plant defense. J. Plant Physiol. 2010, 167:1533-1541.
22. Kong F.J., Oyanagi A., Komatsu S. Cell wall proteome of wheat roots under flooding stress using gel-based and LC MS/MS-based proteomics approaches. Biochim. Biophys. Acta 2010, 1804:124-136.
23. Winram S.B., Lottenberg R. The plasmin-binding protein Plr of group A streptococci is identified as glyceraldehydes-3-phosphate dehydrogenase. Microbiology 1996, 142:2311-2320.
24. Alloush H.M., López-Ribot J.L., Masten B.J., Chaffin W.L. 3-Phosphoglycerate kinase: a glycolytic enzyme protein present in the cell wall of Candida albicans. Microbiology 1997, 143:321-330.
25. Matta S.K., Agarwal S., Bhatnagar R. Surface localized and extracellular glyceraldehyde-3-phosphate of Bacillus anthracis is a plasminogen binding protein. Biochim. Biophys. Acta 2010, 1804:2111-2120.
26. Nilo R., Saffie C., Liley K., Baeza-Yates R., Cambiazo V., Campos-Vargas R., González M., Meisel L.A., Retamales J., Silva H., Orellana A. Proteomic analysis of peach fruit mesocarp softening and chilling injury using difference gel electrophoresis (DIGE). BMC Genom. 2010, 11:43.
27. Irshad M., Canut H., Borderies G., Pont-Lezica R., Jamet E. A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. BMC Plant Biol. 2008, 8:94.
28. Watson B.S., Lei Z., Dixon R.A., Sumner L.W. Proteomics of Medicago sativa cell walls. Phytochemistry 2004, 65:1709-1720.
29. Bradford M.M. Rapid and quantitative method for quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:248-252.
30. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227:680-685.
31. Casati P., Zhang X., Burlingame A.L., Walbot V. Analysis of leaf proteome after UV-B irradiation in maize lines differing in sensitivity. Mol. Cell. Proteom. 2006, 4:1673-1685.
32. Perkins D.N., Pappin D.J.C., David M., Creasy D.M., Cottrell J.S. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 1999, 20:3551-3567.
33. Bustamante C.A., Rosli H.G., Añón M.C., Civello P.M., Martínez G.A. β-Xylosidase in strawberry fruit: isolation of a full-length gene and analysis of its expression and enzymatic activity in cultivars with contrasting firmness. Plant Sci. 2006, 171:497-504.
34. Meisel L., Fonseca B., González S., Baezayates R., Cambiazo V., Campos R., Gonzalez M., Orellana A., Retamales J., Silva H. A rapid and efficient method for purifying high quality total RNA from peaches (Prunus persica) for functional genomics analyses. Biol. Res. 2005, 38:83-88.
35. Childs K.L., Hamilton J.P., Zhu W., Ly E., Cheung F., Wu H., Rabinowicz P.D., Town C.D., Buell C.R., Chan A.P. The TIGR plant transcript assemblies database. Nucleic Acids Res. 2007, 35:D846-D851.
36. Lazzari B., Caprera A., Vecchietti A., Merelli I., Barale F., Milanesi L., Stella A., Pozzi C. Version VI of the ESTree db: an improved tool for peach transcriptome analysis. BMC Bioinform. 2008, 9:S9.
37. Jung S., Staton M., Lee T., Blenda A., Svancara R., Abbott A., Main D. GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics data. Nucleic Acids Res. 2008, 36:D1034-D1040.
38. -ΔΔCT. Methods 2001, 25:402-408.
39. Orzaez D., Mirabel S., Wieland W.H., Granell A. Agroinjection of tomato fruits. A tool for rapid functional analysis of transgenes directly in fruit. Plant Physiol. 2006, 140:3-11.