-
1
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
1681510, 16788596
-
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2006, 2:2006-0008. 1681510, 16788596.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 2006-10008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
2
-
-
0034678055
-
Harnessing the power of the genome in the search for new antibiotics
-
10.1126/science.287.5460.1973, 10720317
-
Rosamond J, Allsop A. Harnessing the power of the genome in the search for new antibiotics. Science 2000, 287:1973-1976. 10.1126/science.287.5460.1973, 10720317.
-
(2000)
Science
, vol.287
, pp. 1973-1976
-
-
Rosamond, J.1
Allsop, A.2
-
3
-
-
0036265773
-
Comprehensive essential gene identification as a platform for novel anti-infective drug discovery
-
10.2174/1381612023394818, 12052225
-
Haselbeck R, Wall D, Jiang B, Ketela T, Zyskind J, Bussey H, Foulkes JG, Roemer T. Comprehensive essential gene identification as a platform for novel anti-infective drug discovery. Curr Pharm Des 2002, 8:1155-1172. 10.2174/1381612023394818, 12052225.
-
(2002)
Curr Pharm Des
, vol.8
, pp. 1155-1172
-
-
Haselbeck, R.1
Wall, D.2
Jiang, B.3
Ketela, T.4
Zyskind, J.5
Bussey, H.6
Foulkes, J.G.7
Roemer, T.8
-
4
-
-
80054854782
-
RF1 knockout allows ribosomal incorporation of unnatural amino acids at multiple sites
-
10.1038/nchembio.657, 3201715, 21926996
-
Johnson DBF, Xu JF, Shen ZX, Takimoto JK, Schultz MD, Schmitz RJ, Xiang Z, Ecker JR, Briggs SP, Wang L. RF1 knockout allows ribosomal incorporation of unnatural amino acids at multiple sites. Nat Chem Biol 2011, 7:779-786. 10.1038/nchembio.657, 3201715, 21926996.
-
(2011)
Nat Chem Biol
, vol.7
, pp. 779-786
-
-
Johnson, D.B.F.1
Xu, J.F.2
Shen, Z.X.3
Takimoto, J.K.4
Schultz, M.D.5
Schmitz, R.J.6
Xiang, Z.7
Ecker, J.R.8
Briggs, S.P.9
Wang, L.10
-
5
-
-
4544371669
-
Determination of the core of a minimal bacterial gene set
-
10.1128/MMBR.68.3.518-537.2004, 515251, 15353568
-
Gil R, Silva FJ, Pereto J, Moya A. Determination of the core of a minimal bacterial gene set. Microbiol Mol Biol Rev 2004, 68:518-537. 10.1128/MMBR.68.3.518-537.2004, 515251, 15353568.
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 518-537
-
-
Gil, R.1
Silva, F.J.2
Pereto, J.3
Moya, A.4
-
6
-
-
33646722147
-
Emergent properties of reduced-genome Escherichia coli
-
10.1126/science.1126439, 16645050
-
Posfai G, Plunkett G, Feher T, Frisch D, Keil GM, Umenhoffer K, Kolisnychenko V, Stahl B, Sharma SS, de Arruda M, et al. Emergent properties of reduced-genome Escherichia coli. Science 2006, 312:1044-1046. 10.1126/science.1126439, 16645050.
-
(2006)
Science
, vol.312
, pp. 1044-1046
-
-
Posfai, G.1
Plunkett, G.2
Feher, T.3
Frisch, D.4
Keil, G.M.5
Umenhoffer, K.6
Kolisnychenko, V.7
Stahl, B.8
Sharma, S.S.9
de Arruda, M.10
-
7
-
-
45749137679
-
Minimal Escherichia coli cell for the most efficient production of ethanol from hexoses and pentoses
-
10.1128/AEM.02708-07, 2446564, 18424547
-
Trinh CT, Unrean P, Srienc F. Minimal Escherichia coli cell for the most efficient production of ethanol from hexoses and pentoses. Appl Environ Microbiol 2008, 74:3634-3643. 10.1128/AEM.02708-07, 2446564, 18424547.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 3634-3643
-
-
Trinh, C.T.1
Unrean, P.2
Srienc, F.3
-
8
-
-
70349761093
-
Metabolic engineering of a reduced-genome strain of Escherichia coli for L-threonine production
-
10.1186/1475-2859-8-2, 2634754, 19128451
-
Lee JH, Sung BH, Kim MS, Blattner FR, Yoon BH, Kim JH, Kim SC. Metabolic engineering of a reduced-genome strain of Escherichia coli for L-threonine production. Microb Cell Fact 2009, 8:2. 10.1186/1475-2859-8-2, 2634754, 19128451.
-
(2009)
Microb Cell Fact
, vol.8
, pp. 2
-
-
Lee, J.H.1
Sung, B.H.2
Kim, M.S.3
Blattner, F.R.4
Yoon, B.H.5
Kim, J.H.6
Kim, S.C.7
-
9
-
-
67649667312
-
Natural selection and immortality
-
10.1007/s10522-008-9171-5, 2700247, 18720024
-
Danchin A. Natural selection and immortality. Biogerontology 2009, 10:503-516. 10.1007/s10522-008-9171-5, 2700247, 18720024.
-
(2009)
Biogerontology
, vol.10
, pp. 503-516
-
-
Danchin, A.1
-
10
-
-
2642659387
-
GroE is vital for cell-wall synthesis
-
10.1038/32317, 9515958
-
McLennan N, Masters M. GroE is vital for cell-wall synthesis. Nature 1998, 392:139-139. 10.1038/32317, 9515958.
-
(1998)
Nature
, vol.392
, pp. 139-139
-
-
McLennan, N.1
Masters, M.2
-
11
-
-
40549103080
-
Introduction of conditional lethal amber mutations in Escherichia coli
-
10.1007/978-1-59745-321-9_21, 18392977
-
Herring CD. Introduction of conditional lethal amber mutations in Escherichia coli. Methods Mol Biol 2008, 416:323-334. 10.1007/978-1-59745-321-9_21, 18392977.
-
(2008)
Methods Mol Biol
, vol.416
, pp. 323-334
-
-
Herring, C.D.1
-
12
-
-
70350366781
-
Use of a riboswitch-controlled conditional hypomorphic mutation to uncover a role for the essential csrA gene in bacterial autoaggregation
-
10.1074/jbc.M109.028076, 2781419, 19706608
-
Jin Y, Watt RM, Danchin A, Huang JD. Use of a riboswitch-controlled conditional hypomorphic mutation to uncover a role for the essential csrA gene in bacterial autoaggregation. J Biol Chem 2009, 284:28738-28745. 10.1074/jbc.M109.028076, 2781419, 19706608.
-
(2009)
J Biol Chem
, vol.284
, pp. 28738-28745
-
-
Jin, Y.1
Watt, R.M.2
Danchin, A.3
Huang, J.D.4
-
13
-
-
0035929121
-
Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA
-
10.1126/science.1063566, 11567142
-
Ji Y, Zhang B, Van SF, Horn, Warren P, Woodnutt G, Burnham MK, Rosenberg M. Identification of critical staphylococcal genes using conditional phenotypes generated by antisense RNA. Science 2001, 293:2266-2269. 10.1126/science.1063566, 11567142.
-
(2001)
Science
, vol.293
, pp. 2266-2269
-
-
Ji, Y.1
Zhang, B.2
Van, S.F.3
Horn4
Warren, P.5
Woodnutt, G.6
Burnham, M.K.7
Rosenberg, M.8
-
14
-
-
44349090822
-
Essential role of the chaperonin folding compartment in vivo
-
2396394, 18418386
-
Tang YC, Chang HC, Chakraborty K, Hartl FU, Hayer-Hartl M. Essential role of the chaperonin folding compartment in vivo. EMBO J 2008, 27:1458-1468. 2396394, 18418386.
-
(2008)
EMBO J
, vol.27
, pp. 1458-1468
-
-
Tang, Y.C.1
Chang, H.C.2
Chakraborty, K.3
Hartl, F.U.4
Hayer-Hartl, M.5
-
15
-
-
1942507982
-
Conditional lethal amber mutations in essential Escherichia coli genes
-
10.1128/JB.186.9.2673-2681.2004, 387789, 15090508
-
Herring CD, Blattner FR. Conditional lethal amber mutations in essential Escherichia coli genes. J Bacteriol 2004, 186:2673-2681. 10.1128/JB.186.9.2673-2681.2004, 387789, 15090508.
-
(2004)
J Bacteriol
, vol.186
, pp. 2673-2681
-
-
Herring, C.D.1
Blattner, F.R.2
-
16
-
-
0034574886
-
Determination of chaperonin activity in vivo
-
van der Vies SM, Lund PA. Determination of chaperonin activity in vivo. Methods Mol Biol 2000, 140:75-96.
-
(2000)
Methods Mol Biol
, vol.140
, pp. 75-96
-
-
van der Vies, S.M.1
Lund, P.A.2
-
17
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
10.1073/pnas.120163297, 18686, 10829079
-
Datsenko KA, Wanner BL. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 2000, 97:6640-6645. 10.1073/pnas.120163297, 18686, 10829079.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
18
-
-
0025021795
-
Transcription from the rha operon psr promoter
-
10.1016/0022-2836(90)90003-5, 1688950
-
Tobin JF, Schleif RF. Transcription from the rha operon psr promoter. J Mol Biol 1990, 211:1-4. 10.1016/0022-2836(90)90003-5, 1688950.
-
(1990)
J Mol Biol
, vol.211
, pp. 1-4
-
-
Tobin, J.F.1
Schleif, R.F.2
-
19
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
177145, 7608087
-
Guzman LM, Belin D, Carson MJ, Beckwith J. Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J Bacteriol 1995, 177:4121-4130. 177145, 7608087.
-
(1995)
J Bacteriol
, vol.177
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
20
-
-
0027368853
-
A regulatory cascade in the induction of rhaBAD
-
10.1006/jmbi.1993.1565, 8230210
-
Egan SM, Schleif RF. A regulatory cascade in the induction of rhaBAD. J Mol Biol 1993, 234:87-98. 10.1006/jmbi.1993.1565, 8230210.
-
(1993)
J Mol Biol
, vol.234
, pp. 87-98
-
-
Egan, S.M.1
Schleif, R.F.2
-
21
-
-
0014597834
-
Thermosensitive mutants of K12 Escherichia coli. 3. A lethal mutation of E. coli affecting the activity of the adenylate kinase
-
Cousin D, Buttin G. Thermosensitive mutants of K12 Escherichia coli. 3. A lethal mutation of E. coli affecting the activity of the adenylate kinase. Ann Inst Pasteur (Paris) 1969, 117:612-630.
-
(1969)
Ann Inst Pasteur (Paris)
, vol.117
, pp. 612-630
-
-
Cousin, D.1
Buttin, G.2
-
22
-
-
0016524462
-
Role of adenylate kinase in the regulation of macromolecular biosynthesis in a putative mutant of Escherichia coli defective in membrane phospholipid biosynthesis
-
235699, 166976
-
Glaser M, Nulty W, Vagelos PR. Role of adenylate kinase in the regulation of macromolecular biosynthesis in a putative mutant of Escherichia coli defective in membrane phospholipid biosynthesis. J Bacteriol 1975, 123:128-136. 235699, 166976.
-
(1975)
J Bacteriol
, vol.123
, pp. 128-136
-
-
Glaser, M.1
Nulty, W.2
Vagelos, P.R.3
-
23
-
-
0028176499
-
Chi sites in combination with RecA protein increase the survival of linear DNA in Escherichia coli by inactivating exoV activity of RecBCD nuclease
-
395156, 8026461
-
Kuzminov A, Schabtach E, Stahl FW. Chi sites in combination with RecA protein increase the survival of linear DNA in Escherichia coli by inactivating exoV activity of RecBCD nuclease. EMBO J 1994, 13:2764-2776. 395156, 8026461.
-
(1994)
EMBO J
, vol.13
, pp. 2764-2776
-
-
Kuzminov, A.1
Schabtach, E.2
Stahl, F.W.3
-
24
-
-
0026316101
-
The N-end rule in bacteria
-
10.1126/science.1962196, 1962196
-
Tobias JW, Shrader TE, Rocap G, Varshavsky A. The N-end rule in bacteria. Science 1991, 254:1374-1377. 10.1126/science.1962196, 1962196.
-
(1991)
Science
, vol.254
, pp. 1374-1377
-
-
Tobias, J.W.1
Shrader, T.E.2
Rocap, G.3
Varshavsky, A.4
-
25
-
-
0026766423
-
Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms
-
10.1111/j.1365-2958.1992.tb01351.x, 1321324
-
Antoine R, Locht C. Isolation and molecular characterization of a novel broad-host-range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from gram-positive organisms. Mol Microbiol 1992, 6:1785-1799. 10.1111/j.1365-2958.1992.tb01351.x, 1321324.
-
(1992)
Mol Microbiol
, vol.6
, pp. 1785-1799
-
-
Antoine, R.1
Locht, C.2
-
26
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 3
-
Sambrook J, Russell DW. Molecular cloning : a laboratory manual 2001, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., 3.
-
(2001)
Molecular cloning : a laboratory manual
-
-
Sambrook, J.1
Russell, D.W.2
-
27
-
-
0028089097
-
RecA-independent and RecA-dependent intramolecular plasmid recombination - Differential homology requirement and distance effect
-
10.1006/jmbi.1994.1002, 8289271
-
Bi X, Liu LF. RecA-independent and RecA-dependent intramolecular plasmid recombination - Differential homology requirement and distance effect. J Mol Biol 1994, 235:414-423. 10.1006/jmbi.1994.1002, 8289271.
-
(1994)
J Mol Biol
, vol.235
, pp. 414-423
-
-
Bi, X.1
Liu, L.F.2
-
28
-
-
84863187862
-
Bacillus subtilis genome editing using ssDNA with short homology regions
-
10.1093/nar/gks248, 3384351, 22422839
-
Wang Y, Weng J, Waseem R, Yin X, Zhang R, Shen Q. Bacillus subtilis genome editing using ssDNA with short homology regions. Nucleic Acids Res 2012, 40:e91. 10.1093/nar/gks248, 3384351, 22422839.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Wang, Y.1
Weng, J.2
Waseem, R.3
Yin, X.4
Zhang, R.5
Shen, Q.6
-
29
-
-
84877696851
-
ClosTron-mediated engineering of Clostridium
-
Kuehne SA, Minton NP. ClosTron-mediated engineering of Clostridium. Bioengineered 2012, 3:245-252.
-
(2012)
Bioengineered
, vol.3
, pp. 245-252
-
-
Kuehne, S.A.1
Minton, N.P.2
-
30
-
-
0028676232
-
New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
-
10.1002/yea.320101310, 7747518
-
Wach A, Brachat A, Pohlmann R, Philippsen P. New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast 1994, 10:1793-1808. 10.1002/yea.320101310, 7747518.
-
(1994)
Yeast
, vol.10
, pp. 1793-1808
-
-
Wach, A.1
Brachat, A.2
Pohlmann, R.3
Philippsen, P.4
-
31
-
-
0030600480
-
A set of compatible tac promoter expression vectors
-
10.1016/0378-1119(96)00289-2, 8921858
-
Dykxhoorn DM, St Pierre R, Linn T. A set of compatible tac promoter expression vectors. Gene 1996, 177:133-136. 10.1016/0378-1119(96)00289-2, 8921858.
-
(1996)
Gene
, vol.177
, pp. 133-136
-
-
Dykxhoorn, D.M.1
St Pierre, R.2
Linn, T.3
-
32
-
-
0036228521
-
Engineering a reduced Escherichia coli genome
-
10.1101/gr.217202, 187512, 11932248
-
Kolisnychenko V, Plunkett G, Herring CD, Feher T, Posfai J, Blattner FR, Posfai G. Engineering a reduced Escherichia coli genome. Genome Res 2002, 12:640-647. 10.1101/gr.217202, 187512, 11932248.
-
(2002)
Genome Res
, vol.12
, pp. 640-647
-
-
Kolisnychenko, V.1
Plunkett, G.2
Herring, C.D.3
Feher, T.4
Posfai, J.5
Blattner, F.R.6
Posfai, G.7
-
33
-
-
31544438578
-
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
-
1681481, 16738553
-
Hayashi K, Morooka N, Yamamoto Y, Fujita K, Isono K, Choi S, Ohtsubo E, Baba T, Wanner BL, Mori H, Horiuchi T. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol Syst Biol 2006, 2:0007. 1681481, 16738553.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 0007
-
-
Hayashi, K.1
Morooka, N.2
Yamamoto, Y.3
Fujita, K.4
Isono, K.5
Choi, S.6
Ohtsubo, E.7
Baba, T.8
Wanner, B.L.9
Mori, H.10
Horiuchi, T.11
-
34
-
-
41549115091
-
The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse
-
10.1128/JB.01695-07, 2293198, 18245285
-
Durfee T, Nelson R, Baldwin S, Plunkett G, Burland V, Mau B, Petrosino JF, Qin X, Muzny DM, Ayele M, et al. The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse. J Bacteriol 2008, 190:2597-2606. 10.1128/JB.01695-07, 2293198, 18245285.
-
(2008)
J Bacteriol
, vol.190
, pp. 2597-2606
-
-
Durfee, T.1
Nelson, R.2
Baldwin, S.3
Plunkett, G.4
Burland, V.5
Mau, B.6
Petrosino, J.F.7
Qin, X.8
Muzny, D.M.9
Ayele, M.10
|