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Volumn 14, Issue 5, 2012, Pages 839-844

Assessing the potential of candidate DNA barcodes for identifying non-flowering seed plants

Author keywords

DNA barcoding; Gymnosperms; Identification; ITS2

Indexed keywords

DNA; GENETIC ANALYSIS; GYMNOSPERM; SAMPLING;

EID: 84864763733     PISSN: 14358603     EISSN: 14388677     Source Type: Journal    
DOI: 10.1111/j.1438-8677.2011.00554.x     Document Type: Article
Times cited : (14)

References (40)
  • 1
    • 69149084832 scopus 로고    scopus 로고
    • A DNA barcode for land plants
    • CBOL Plant Working Group
    • CBOL Plant Working Group (2009) A DNA barcode for land plants. Proceedings of the National Academy of Sciences USA, 106, 12794-12797.
    • (2009) Proceedings of the National Academy of Sciences USA , vol.106 , pp. 12794-12797
  • 5
    • 0037677692 scopus 로고    scopus 로고
    • ITS2 is a double-edged tool for eukaryote evolutionary comparisons
    • Coleman A.W. (2003) ITS2 is a double-edged tool for eukaryote evolutionary comparisons. Trends in Genetics, 19, 370-375.
    • (2003) Trends in Genetics , vol.19 , pp. 370-375
    • Coleman, A.W.1
  • 6
    • 33749562542 scopus 로고    scopus 로고
    • 300,000 species to identify: problems, progress, and prospects in DNA barcoding of land plants
    • Cowan R.S., Chase M.W., Kress W.J., Savolainen V. (2006) 300, 000 species to identify: problems, progress, and prospects in DNA barcoding of land plants. Taxon, 55, 611-616.
    • (2006) Taxon , vol.55 , pp. 611-616
    • Cowan, R.S.1    Chase, M.W.2    Kress, W.J.3    Savolainen, V.4
  • 8
    • 77958142499 scopus 로고    scopus 로고
    • Evaluating the feasibility of using candidate DNA barcodes in discriminating species of the large Asteraceae family
    • Gao T., Yao H., Song J.Y., Zhu Y.J., Liu C., Chen S.L. (2010) Evaluating the feasibility of using candidate DNA barcodes in discriminating species of the large Asteraceae family. BMC Evolutionary Biology, 10, 324.
    • (2010) BMC Evolutionary Biology , vol.10 , pp. 324
    • Gao, T.1    Yao, H.2    Song, J.Y.3    Zhu, Y.J.4    Liu, C.5    Chen, S.L.6
  • 9
    • 0037007637 scopus 로고    scopus 로고
    • Challenges for taxonomy - the discipline will have to reinvent itself if it is to survive and flourish
    • Godfray H.C.J. (2002) Challenges for taxonomy - the discipline will have to reinvent itself if it is to survive and flourish. Nature, 417, 17-19.
    • (2002) Nature , vol.417 , pp. 17-19
    • Godfray, H.C.J.1
  • 10
    • 17844387583 scopus 로고    scopus 로고
    • DNA barcoding does not compete with taxonomy
    • Gregory T.R. (2005) DNA barcoding does not compete with taxonomy. Nature, 434, 1067.
    • (2005) Nature , vol.434 , pp. 1067
    • Gregory, T.R.1
  • 12
    • 33947620069 scopus 로고    scopus 로고
    • DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics
    • Hajibabaei M., Singer G.A.C., Hebert P.D.N., Hickey D.A. (2007) DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics. Trends in Genetics, 23, 167-172.
    • (2007) Trends in Genetics , vol.23 , pp. 167-172
    • Hajibabaei, M.1    Singer, G.A.C.2    Hebert, P.D.N.3    Hickey, D.A.4
  • 13
    • 31344432889 scopus 로고    scopus 로고
    • The promise of DNA barcoding for taxonomy
    • Hebert P.D.N., Gregory T.R. (2005) The promise of DNA barcoding for taxonomy. Systematic Biology, 54, 852-859.
    • (2005) Systematic Biology , vol.54 , pp. 852-859
    • Hebert, P.D.N.1    Gregory, T.R.2
  • 16
    • 77958573616 scopus 로고    scopus 로고
    • The identification of medicinal plants
    • Heinrich M. (2007) The identification of medicinal plants. Journal of Ethnopharmacology, 111, 440.
    • (2007) Journal of Ethnopharmacology , vol.111 , pp. 440
    • Heinrich, M.1
  • 17
    • 77951631088 scopus 로고    scopus 로고
    • A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region
    • Kress W.J., Erickson D.L. (2007) A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region. PLoS ONE, 2, e508.
    • (2007) PLoS ONE , vol.2
    • Kress, W.J.1    Erickson, D.L.2
  • 19
    • 72849141142 scopus 로고    scopus 로고
    • Comparative analysis of the complete sequence of the plastid genome of Parthenium argentatum and identification of DNA barcodes to differentiate Parthenium species and lines
    • Kumar S., Hahn F.M., McMahan C.M., Cornish K., Whalen M.C. (2009) Comparative analysis of the complete sequence of the plastid genome of Parthenium argentatum and identification of DNA barcodes to differentiate Parthenium species and lines. BMC Plant Biology, 9, 131.
    • (2009) BMC Plant Biology , vol.9 , pp. 131
    • Kumar, S.1    Hahn, F.M.2    McMahan, C.M.3    Cornish, K.4    Whalen, M.C.5
  • 21
    • 33847767178 scopus 로고    scopus 로고
    • A comparison of algorithms for the identification of specimens using DNA barcodes, examples from gymnosperms
    • Little D.P., Stevenson D.W. (2007) A comparison of algorithms for the identification of specimens using DNA barcodes, examples from gymnosperms. Cladistics, 23, 1-21.
    • (2007) Cladistics , vol.23 , pp. 1-21
    • Little, D.P.1    Stevenson, D.W.2
  • 23
    • 53849115779 scopus 로고    scopus 로고
    • The use of mean instead of smallest interspecific distances exaggerates the size of the "Barcoding gap" and leads to misidentification
    • Meier R., Zhang G.Y., Ali F. (2008) The use of mean instead of smallest interspecific distances exaggerates the size of the "Barcoding gap" and leads to misidentification. Systematic Biology, 57, 809-813.
    • (2008) Systematic Biology , vol.57 , pp. 809-813
    • Meier, R.1    Zhang, G.Y.2    Ali, F.3
  • 24
    • 29144473686 scopus 로고    scopus 로고
    • DNA barcoding: error rates based on comprehensive sampling
    • Meyer C.P., Paulay G. (2005) DNA barcoding: error rates based on comprehensive sampling. PLoS Biology, 3, 2229-2238.
    • (2005) PLoS Biology , vol.3 , pp. 2229-2238
    • Meyer, C.P.1    Paulay, G.2
  • 25
    • 52149097566 scopus 로고    scopus 로고
    • Analysis of the internal transcribed spacer 2 (ITS2) region of Scuticociliates and related taxa (Ciliophora, Oligohymenophorea) to infer their evolution and phylogeny
    • Miao M., Warren A., Song W.B., Wang S., Shang H.M. (2008) Analysis of the internal transcribed spacer 2 (ITS2) region of Scuticociliates and related taxa (Ciliophora, Oligohymenophorea) to infer their evolution and phylogeny. Protist, 159, 519-533.
    • (2008) Protist , vol.159 , pp. 519-533
    • Miao, M.1    Warren, A.2    Song, W.B.3    Wang, S.4    Shang, H.M.5
  • 27
    • 77953809861 scopus 로고    scopus 로고
    • Using DNA barcoding to identify species within Euphorbiaceae
    • Pang X.H., Song J.Y., Zhu Y.J., Xie C.X., Chen S.L. (2010) Using DNA barcoding to identify species within Euphorbiaceae. Planta Medica, 76, 1784-1786.
    • (2010) Planta Medica , vol.76 , pp. 1784-1786
    • Pang, X.H.1    Song, J.Y.2    Zhu, Y.J.3    Xie, C.X.4    Chen, S.L.5
  • 28
  • 29
    • 71549165131 scopus 로고    scopus 로고
    • Phylogenetic reconstruction using secondary structures and sequence motifs of ITS2 rDNA of Paragonimus westermani (Kerbert, 1878) Bram, 1899 (Digenea: Paragonimidae) and related species
    • Prasad P.K., Tandon V., Biswal D.K., Goswami L.M., Chatterjee A. (2009) Phylogenetic reconstruction using secondary structures and sequence motifs of ITS2 rDNA of Paragonimus westermani (Kerbert, 1878) Bram, 1899 (Digenea: Paragonimidae) and related species. BMC Genomics, 10, S25.
    • (2009) BMC Genomics , vol.10
    • Prasad, P.K.1    Tandon, V.2    Biswal, D.K.3    Goswami, L.M.4    Chatterjee, A.5
  • 30
    • 41849149675 scopus 로고    scopus 로고
    • Testing the reliability of genetic methods of species identification via simulation
    • Ross H.A., Murugan S., Li W.L.S. (2008) Testing the reliability of genetic methods of species identification via simulation. Systematic Biology, 57, 216-230.
    • (2008) Systematic Biology , vol.57 , pp. 216-230
    • Ross, H.A.1    Murugan, S.2    Li, W.L.S.3
  • 31
    • 42649090839 scopus 로고    scopus 로고
    • DNA Barcoding in the Cycadales: testing the potential of proposed barcoding markers for species identification of Cycads
    • Sass C., Little D.P., Stevenson D.W., Specht C.D. (2007) DNA Barcoding in the Cycadales: testing the potential of proposed barcoding markers for species identification of Cycads. PLoS ONE, 2, e1154.
    • (2007) PLoS ONE , vol.2
    • Sass, C.1    Little, D.P.2    Stevenson, D.W.3    Specht, C.D.4
  • 32
    • 18544379428 scopus 로고    scopus 로고
    • DNA barcoding a useful tool for taxonomists
    • Schindel D.E., Miller S.E. (2005) DNA barcoding a useful tool for taxonomists. Nature, 435, 17.
    • (2005) Nature , vol.435 , pp. 17
    • Schindel, D.E.1    Miller, S.E.2
  • 33
    • 67650676738 scopus 로고    scopus 로고
    • Authentication of the family Polygonaceae in Chinese pharmacopoeia by DNA barcoding technique
    • Song J.Y., Yao H., Li Y., Li X.W., Lin Y.L. (2009) Authentication of the family Polygonaceae in Chinese pharmacopoeia by DNA barcoding technique. Journal of Ethnopharmacology, 124, 434-439.
    • (2009) Journal of Ethnopharmacology , vol.124 , pp. 434-439
    • Song, J.Y.1    Yao, H.2    Li, Y.3    Li, X.W.4    Lin, Y.L.5
  • 35
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4, Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. (2007) MEGA4, Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution, 24, 1596-1599.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 36
    • 41749086468 scopus 로고    scopus 로고
    • Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds
    • Tavares E.S., Baker A.J. (2008) Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds. BMC Evolutionary Biology, 8, 81.
    • (2008) BMC Evolutionary Biology , vol.8 , pp. 81
    • Tavares, E.S.1    Baker, A.J.2
  • 38
    • 76049119307 scopus 로고    scopus 로고
    • ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus)
    • Wiemers M., Keller A., Wolf M. (2009) ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus). BMC Evolutionary Biology, 9, 300.
    • (2009) BMC Evolutionary Biology , vol.9 , pp. 300
    • Wiemers, M.1    Keller, A.2    Wolf, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.