Halopenitus persicus gen. nov., sp. nov., an archaeon from an Inland salt lake

International Journal of Systematic and Evolutionary Microbiology

Volumn 62, Issue 8, 2012, Pages 1932-1936

  Amoozegar, Mohammad Ali ^a,b   Makhdoumi Kakhki, Ali ^a,b   Fazeli, Seyed Abolhassan Shahzadeh ^b,c   Azarbaijani, Reza ^b   Ventosa, Antonio ^d  

^a UNIVERSITY OF TEHRAN   (Iran)

^b AVICENNA RESEARCH INSTITUTE   (Iran)

^c ROYAN INSTITUTE FOR REPRODUCTIVE BIOMEDICINE   (Iran)

^d UNIVERSITY OF SEVILLE   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOLIPID; MAGNESIUM CHLORIDE; PHOSPHATIDYLGLYCEROL; PHOSPHOLIPID; QUINONE DERIVATIVE; RNA 16S; SODIUM CHLORIDE;

ARCHAEON; ARTICLE; BACTERIAL CELL; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIAL STRAIN; GENE SEQUENCE; GENETIC ANALYSIS; HALOPENITUS PERSICUS; HALORUBRUM; IRAN; LAKE; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHYLOGENY; PRIORITY JOURNAL; TEMPERATURE;

BASE COMPOSITION; DNA, ARCHAEAL; HALOBACTERIACEAE; HYDROGEN-ION CONCENTRATION; LAKES; MAGNESIUM CHLORIDE; MOLECULAR SEQUENCE DATA; PHOSPHOLIPIDS; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SODIUM CHLORIDE; WATER MICROBIOLOGY;

ARCHAEA; HALOBACTERIA; HALOBACTERIACEAE; HALORUBRUM;

EID: 84864696030     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.036921-0     Document Type: Article

References (26)

1. Antón, J., Peñ a, A., Santos, F., Martínez-García, M., Schmitt-Kopplin, P. & Rosselló-Mora, R. (2008). Distribution, abundance and diversity of the extremely halophilic bacterium Salinibacter ruber. Saline Syst 4, 15.
2. Balch, W. E. & Wolfe, R. S. (1976). New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)- dependent growth of Methanobacterium ruminantium in a pressureized atmosphere. Appl Environ Microbiol 32, 781-791.
3. Bardavid, R. E., Mana, L. & Oren, A. (2007). Haloplanus natans gen. nov., sp. nov., an extremely halophilic, gas-vacuolate archaeon isolated from Dead Sea-Red Sea water mixtures in experimental outdoor ponds. Int J Syst Evol Microbiol 57, 780-783.
4. Bryant, M. P. (1972). Commentary on the Hungate technique for culture of anaerobic bacteria. Am J Clin Nutr 25, 1324-1328.
5. Cui, H. L., Gao, X., Sun, F. F., Dong, Y., Xu, X. W., Zhou, Y. G., Liu, H. C., Oren, A. & Zhou, P. J. (2010). Halogranum rubrum gen. nov., sp. nov., a halophilic archaeon isolated from a marine solar saltern. Int J Syst Evol Microbiol 60, 1366-1371.
6. Cui, H. L., Yang, X., Gao, X. & Xu, X. W. (2011). Halobellus clavatus gen. nov., sp. nov. and Halorientalis regularis gen. nov., sp. nov., two new members of the family Halobacteriaceae. Int J Syst Evol Microbiol 61, 2682-2689.
7. DeLong, E. F. (1992). Archaea in coastal marine environments. Proc Natl Acad Sci U S A 89, 5685-5689.
8. Dussault, H. P. (1955). An improved technique for staining red halophilic bacteria. J Bacteriol 70, 484-485.
9. Dyall-Smith, M. L. (2006). The Halohandbook: Protocols for Haloarchaeal Genetics. http://www.haloarchaea.com/resources/halohandbook.
10. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
11. Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
12. González, C., Gutiérrez, C. & Ramirez, C. (1978). Halobacterium vallismortis sp. nov. An amylolytic and carbohydrate-metabolizing, extremely halophilic bacterium. Can J Microbiol 24, 710-715.
13. nd edn, vol. 1, pp. 294-301. Edited by D. R. Boone, R. W. Castenholz & G. M. Garrity. New York: Springer.
14. Gutiérrez, C. & González, C. (1972). Method for simultaneous detection of proteinase and esterase activities in extremely halophilic bacteria. Appl Microbiol 24, 516-517.
15. Hezayen, F. F., Rehm, B. H. A., Tindall, B. J. & Steinbüchel, A. (2001). Transfer of Natrialba asiatica B1T to Natrialba taiwanensis sp. nov. and description of Natrialba aegyptiaca sp. nov., a novel extremely halophilic, aerobic, non-pigmented member of the Archaea from Egypt that produces extracellular poly(glutamic acid). Int J Syst Evol Microbiol 51, 1133-1142.
16. Kamekura, M. & Dyall-Smith, M. L. (1995). Taxonomy of the family Halobacteriaceae and description of two new genera Halorubrobacterium and Natrialba. J Gen Appl Microbiol 41, 333-350.
17. Lane, D. J., Pace, B., Olsen, G. J., Stahl, D. A., Sogin, M. L. & Pace, N. R. (1985). Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc Natl Acad Sci U S A 82, 6955-6959.
18. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
19. Oren, A. (2002). Molecular ecology of extremely halophilic Archaea and Bacteria. FEMS Microbiol Ecol 39, 1-7.
20. Oren, A., Ventosa, A. & Grant, W. D. (1997). Proposed minimal standards for description of new taxa in the order Halobacteriales. Int J Syst Bacteriol 47, 233-238.
21. Rzhetsky, A. & Nei, M. (1992). A simple method for estimating and testing minimum-evolution trees. Mol Biol Evol 9, 945-967.
22. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
23. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
24. Tamura, K., Nei, M., Dudley, J. & Kumar, S. (2004). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
25. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
26. Wainø, M., Tindall, B. J. & Ingvorsen, K. (2000). Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah. Int J Syst Evol Microbiol 50, 183-190.