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Volumn 7, Issue 8, 2012, Pages 811-814

Formation of nuclear heterochromatin the nucleolar point of view

Author keywords

Heterochromatin; Nucleolus; Nucleus; PARP1; Pericentric heterochromatin; PRNA; RDNA; TIP5

Indexed keywords

CENTROMERE PROTEIN E; NICOTINAMIDE ADENINE DINUCLEOTIDE ADENOSINE DIPHOSPHATE RIBOSYLTRANSFERASE 1; RIBOSOME DNA; RIBOSOME RNA;

EID: 84864680102     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.21072     Document Type: Article
Times cited : (74)

References (34)
  • 1
    • 84864675877 scopus 로고    scopus 로고
    • In: MOJ O, ed. The Nucleolus: Springer
    • Olson M. Preface. In: MOJ O, ed. The Nucleolus: Springer 2011; 5-17.
    • (2011) Preface , pp. 5-17
    • Olson, M.1
  • 3
    • 0025979413 scopus 로고
    • Chromosome topology in mammalian interphase nuclei
    • PMID:1988281
    • Haaf T, Schmid M. Chromosome topology in mammalian interphase nuclei. Exp Cell Res 1991; 192:325-332; PMID:1988281; http://dx.doi.org/10.1016/0014-4827(91)90048-Y.
    • (1991) Exp Cell Res , vol.192 , pp. 325-332
    • Haaf, T.1    Schmid, M.2
  • 4
    • 0029586756 scopus 로고
    • The centromere: Hub of chromosomal activities
    • PMID:7502067
    • Pluta AF, Mackay AM, Ainsztein AM, Goldberg IG, Earnshaw WC. The centromere: hub of chromosomal activities. Science 1995; 270:1591-1594; PMID:7502067; http://dx.doi.org/10.1126/science.270.5242.1591.
    • (1995) Science , vol.270 , pp. 1591-1594
    • Pluta, A.F.1    Mackay, A.M.2    Ainsztein, A.M.3    Goldberg, I.G.4    Earnshaw, W.C.5
  • 5
    • 77954954525 scopus 로고    scopus 로고
    • The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats
    • PMID:20168299
    • Guetg C, Lienemann P, Sirri V, Grummt I, Hernandez-Verdun D, Hottiger MO, et al. The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats. EMBO J 2010; 29:2135-2146; PMID:20168299; http://dx.doi.org/10.1038/emboj.2010.17.
    • (2010) EMBO J , vol.29 , pp. 2135-2146
    • Guetg, C.1    Lienemann, P.2    Sirri, V.3    Grummt, I.4    Hernandez-Verdun, D.5    Hottiger, M.O.6
  • 6
    • 0017373348 scopus 로고
    • Nucleolus organizers in Mus musculus subspecies and in the RAG mouse cell line
    • PMID:69563
    • Dev VG, Tantravahi R, Miller DA, Miller OJ. Nucleolus organizers in Mus musculus subspecies and in the RAG mouse cell line. Genetics 1977; 86:389-398; PMID:69563.
    • (1977) Genetics , vol.86 , pp. 389-398
    • Dev, V.G.1    Tantravahi, R.2    Miller, D.A.3    Miller, O.J.4
  • 7
    • 0028409020 scopus 로고
    • Chromosomal locations of Ag-NORs and clusters of ribosomal DNA in laboratory strains of mice
    • PMID:8012113
    • Kurihara Y, Suh DS, Suzuki H, Moriwaki K. Chromosomal locations of Ag-NORs and clusters of ribosomal DNA in laboratory strains of mice. Mamm Genome 1994; 5:225-228; PMID:8012113; http://dx.doi.org/10.1007/BF00360550.
    • (1994) Mamm Genome , vol.5 , pp. 225-228
    • Kurihara, Y.1    Suh, D.S.2    Suzuki, H.3    Moriwaki, K.4
  • 8
    • 0035200784 scopus 로고    scopus 로고
    • Chromosomal G-dark bands determine the spatial organization of centromeric heterochromatin in the nucleus
    • PMID:11694589
    • Carvalho C, Pereira HM, Ferreira J, Pina C, Mendonça D, Rosa AC, et al. Chromosomal G-dark bands determine the spatial organization of centromeric heterochromatin in the nucleus. Mol Biol Cell 2001; 12:3563-3572; PMID:11694589.
    • (2001) Mol Biol Cell , vol.12 , pp. 3563-3572
    • Carvalho, C.1    Pereira, H.M.2    Ferreira, J.3    Pina, C.4    Mendonça, D.5    Rosa, A.C.6
  • 9
    • 34249006523 scopus 로고    scopus 로고
    • Perinucleolar targeting of the inactive X during S phase: Evidence for a role in the maintenance of silencing
    • PMID:17512404
    • Zhang LF, Huynh KD, Lee JT. Perinucleolar targeting of the inactive X during S phase: evidence for a role in the maintenance of silencing. Cell 2007; 129:693-706; PMID:17512404; http://dx.doi.org/10.1016/j.cell.2007.03.036.
    • (2007) Cell , vol.129 , pp. 693-706
    • Zhang, L.F.1    Huynh, K.D.2    Lee, J.T.3
  • 10
    • 78149295090 scopus 로고    scopus 로고
    • Highresolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli
    • PMID:20826608
    • van Koningsbruggen S, Gierlinski M, Schofield P, Martin D, Barton GJ, Ariyurek Y, et al. Highresolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli. Mol Biol Cell 2010; 21:3735-3748; PMID:20826608; http://dx.doi.org/10.1091/mbc.E10-06-0508.
    • (2010) Mol Biol Cell , vol.21 , pp. 3735-3748
    • van Koningsbruggen, S.1    Gierlinski, M.2    Schofield, P.3    Martin, D.4    Barton, G.J.5    Ariyurek, Y.6
  • 12
    • 0024392359 scopus 로고
    • Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle
    • PMID:2720786
    • Conconi A, Widmer RM, Koller T, Sogo JM. Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle. Cell 1989; 57:753-761; PMID:2720786; http://dx.doi.org/10.1016/0092-8674(89)90790-3.
    • (1989) Cell , vol.57 , pp. 753-761
    • Conconi, A.1    Widmer, R.M.2    Koller, T.3    Sogo, J.M.4
  • 13
    • 0034791175 scopus 로고    scopus 로고
    • Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription
    • PMID:11583633
    • Santoro R, Grummt I. Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription. Mol Cell 2001; 8:719-725; PMID:11583633; http://dx.doi.org/10.1016/S1097-2765(01)00317-3.
    • (2001) Mol Cell , vol.8 , pp. 719-725
    • Santoro, R.1    Grummt, I.2
  • 14
    • 0036844024 scopus 로고    scopus 로고
    • The nucleolar remodeling complex NoRC mediates heterochromatin formation and silencing of ribosomal gene transcription
    • PMID:12368916
    • Santoro R, Li J, Grummt I. The nucleolar remodeling complex NoRC mediates heterochromatin formation and silencing of ribosomal gene transcription. Nat Genet 2002; 32:393-396; PMID:12368916; http://dx.doi.org/10.1038/ng1010.
    • (2002) Nat Genet , vol.32 , pp. 393-396
    • Santoro, R.1    Li, J.2    Grummt, I.3
  • 15
    • 33646147563 scopus 로고    scopus 로고
    • Intergenic transcripts regulate the epigenetic state of rRNA genes
    • PMID:16678107
    • Mayer C, Schmitz KM, Li J, Grummt I, Santoro R. Intergenic transcripts regulate the epigenetic state of rRNA genes. Mol Cell 2006; 22:351-361; PMID:16678107; http://dx.doi.org/10.1016/j.molcel.2006.03.028.
    • (2006) Mol Cell , vol.22 , pp. 351-361
    • Mayer, C.1    Schmitz, K.M.2    Li, J.3    Grummt, I.4    Santoro, R.5
  • 16
    • 24744448907 scopus 로고    scopus 로고
    • The silence of the ribosomal RNA genes
    • PMID:16041568
    • Santoro R. The silence of the ribosomal RNA genes. Cell Mol Life Sci 2005; 62:2067-2079; PMID:16041568; http://dx.doi.org/10.1007/s00018-005-5110-7.
    • (2005) Cell Mol Life Sci , vol.62 , pp. 2067-2079
    • Santoro, R.1
  • 17
    • 57349093701 scopus 로고    scopus 로고
    • Role for perinuclear chromosome tethering in maintenance of genome stability
    • PMID:18997772
    • Mekhail K, Seebacher J, Gygi SP, Moazed D. Role for perinuclear chromosome tethering in maintenance of genome stability. Nature 2008; 456:667-670; PMID:18997772; http://dx.doi.org/10.1038/nature07460.
    • (2008) Nature , vol.456 , pp. 667-670
    • Mekhail, K.1    Seebacher, J.2    Gygi, S.P.3    Moazed, D.4
  • 18
    • 33845866637 scopus 로고    scopus 로고
    • H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability
    • PMID:17159999
    • Peng JC, Karpen GH. H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability. Nat Cell Biol 2007; 9:25-35; PMID:17159999; http://dx.doi.org/10.1038/ncb1514.
    • (2007) Nat Cell Biol , vol.9 , pp. 25-35
    • Peng, J.C.1    Karpen, G.H.2
  • 19
    • 0037370054 scopus 로고    scopus 로고
    • In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes
    • PMID:12588976
    • French SL, Osheim YN, Cioci F, Nomura M, Beyer AL. In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes. Mol Cell Biol 2003; 23:1558-1568; PMID:12588976; http://dx.doi.org/10.1128/MCB.23.5.1558-68.2003.
    • (2003) Mol Cell Biol , vol.23 , pp. 1558-1568
    • French, S.L.1    Osheim, Y.N.2    Cioci, F.3    Nomura, M.4    Beyer, A.L.5
  • 20
    • 43249097755 scopus 로고    scopus 로고
    • Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules
    • PMID:18451108
    • Merz K, Hondele M, Goetze H, Gmelch K, Stoeckl U, Griesenbeck J. Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules. Genes Dev 2008; 22:1190-1204; PMID:18451108; http://dx.doi.org/10.1101/gad.466908
    • (2008) Genes Dev , vol.22 , pp. 1190-1204
    • Merz, K.1    Hondele, M.2    Goetze, H.3    Gmelch, K.4    Stoeckl, U.5    Griesenbeck, J.6
  • 22
    • 0034502958 scopus 로고    scopus 로고
    • Characterisation of transcriptionally active and inactive chromatin domains in neurons
    • PMID:11082040
    • Akhmanova A, Verkerk T, Langeveld A, Grosveld F, Galjart N. Characterisation of transcriptionally active and inactive chromatin domains in neurons. J Cell Sci 2000; 113:4463-4474; PMID:11082040.
    • (2000) J Cell Sci , vol.113 , pp. 4463-4474
    • Akhmanova, A.1    Verkerk, T.2    Langeveld, A.3    Grosveld, F.4    Galjart, N.5
  • 23
    • 70449555139 scopus 로고    scopus 로고
    • Ribosomal DNA contributes to global chromatin regulation
    • PMID:19822756
    • Paredes S, Maggert KA. Ribosomal DNA contributes to global chromatin regulation. Proc Natl Acad Sci USA 2009; 106:17829-17834; PMID:19822756; http://dx.doi.org/10.1073/pnas.0906811106.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 17829-17834
    • Paredes, S.1    Maggert, K.A.2
  • 24
    • 77954274504 scopus 로고    scopus 로고
    • The PARP side of the nucleus: Molecular actions, physiological outcomes and clinical targets
    • PMID:20603072
    • Krishnakumar R, Kraus WL. The PARP side of the nucleus: molecular actions, physiological outcomes and clinical targets. Mol Cell 2010; 39:8-24; PMID:20603072; http://dx.doi.org/10.1016/j.molcel.2010.06.017.
    • (2010) Mol Cell , vol.39 , pp. 8-24
    • Krishnakumar, R.1    Kraus, W.L.2
  • 25
    • 77951023118 scopus 로고    scopus 로고
    • Toward a unified nomenclature for mammalian ADP-ribosyltransferases
    • PMID:20106667
    • Hottiger MO, Hassa PO, Lüscher B, Schüler H, Koch-Nolte F. Toward a unified nomenclature for mammalian ADP-ribosyltransferases. Trends Biochem Sci 2010; 35:208-219; PMID:20106667; http://dx.doi.org/10.1016/j.tibs.2009.12.003.
    • (2010) Trends Biochem Sci , vol.35 , pp. 208-219
    • Hottiger, M.O.1    Hassa, P.O.2    Lüscher, B.3    Schüler, H.4    Koch-Nolte, F.5
  • 26
    • 0033198919 scopus 로고    scopus 로고
    • Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functions
    • PMID:10455009
    • D'Amours D, Desnoyers S, D'Silva I, Poirier GG. Poly(ADP-ribosyl)ation reactions in the regulation of nuclear functions. Biochem J 1999; 342:249-268; PMID:10455009; http://dx.doi.org/10.1042/0264-6021:3420249.
    • (1999) Biochem J , vol.342 , pp. 249-268
    • D'amours, D.1    Desnoyers, S.2    D'silva, I.3    Poirier, G.G.4
  • 27
    • 56049100464 scopus 로고    scopus 로고
    • Rapid regulation of telomere length is mediated by poly(ADP-ribose) polymerase-1
    • PMID:18835851
    • Beneke S, Cohausz O, Malanga M, Boukamp P, Althaus F, Bürkle A. Rapid regulation of telomere length is mediated by poly(ADP-ribose) polymerase-1. Nucleic Acids Res 2008; 36:6309-6317; PMID:18835851; http://dx.doi.org/10.1093/nar/gkn615.
    • (2008) Nucleic Acids Res , vol.36 , pp. 6309-6317
    • Beneke, S.1    Cohausz, O.2    Malanga, M.3    Boukamp, P.4    Althaus, F.5    Bürkle, A.6
  • 28
    • 0037379179 scopus 로고    scopus 로고
    • Involvement of poly(ADPRibose) polymerase 1 and poly(ADP-Ribosyl)ation in regulation of centrosome function
    • PMID:12640128
    • Kanai M, Tong WM, Sugihara E, Wang ZQ, Fukasawa K, Miwa M. Involvement of poly(ADPRibose) polymerase 1 and poly(ADP-Ribosyl)ation in regulation of centrosome function. Mol Cell Biol 2003; 23:2451-2462; PMID:12640128; http://dx.doi.org/10.1128/MCB.23.7.2451-62.2003.
    • (2003) Mol Cell Biol , vol.23 , pp. 2451-2462
    • Kanai, M.1    Tong, W.M.2    Sugihara, E.3    Wang, Z.Q.4    Fukasawa, K.5    Miwa, M.6
  • 29
    • 0037178870 scopus 로고    scopus 로고
    • Centromere proteins Cenpa, Cenpb and Bub3 interact with poly(ADP-ribose) polymerase-1 protein and are poly(ADP-ribosyl)ated
    • PMID:12011073
    • Saxena A, Saffery R, Wong LH, Kalitsis P, Choo KH. Centromere proteins Cenpa, Cenpb and Bub3 interact with poly(ADP-ribose) polymerase-1 protein and are poly(ADP-ribosyl)ated. J Biol Chem 2002; 277:26921-26926; PMID:12011073; http://dx.doi.org/10.1074/jbc.M200620200.
    • (2002) J Biol Chem , vol.277 , pp. 26921-26926
    • Saxena, A.1    Saffery, R.2    Wong, L.H.3    Kalitsis, P.4    Choo, K.H.5
  • 30
    • 14044273481 scopus 로고    scopus 로고
    • PARP-1 and PARP-2 interact with nucleophosmin/B23 and accumulate in transcriptionally active nucleoli
    • PMID:15615785
    • Meder VS, Boeglin M, de Murcia G, Schreiber V. PARP-1 and PARP-2 interact with nucleophosmin/B23 and accumulate in transcriptionally active nucleoli. J Cell Sci 2005; 118:211-222; PMID:15615785; http://dx.doi.org/10.1242/jcs.01606.
    • (2005) J Cell Sci , vol.118 , pp. 211-222
    • Meder, V.S.1    Boeglin, M.2    de Murcia, G.3    Schreiber, V.4
  • 31
    • 59349083787 scopus 로고    scopus 로고
    • Delocalization of nucleolar poly(ADP-ribose) polymerase-1 to the nucleoplasm and its novel link to cellular sensitivity to DNA damage
    • PMID:19144573
    • Rancourt A, Satoh MS. Delocalization of nucleolar poly(ADP-ribose) polymerase-1 to the nucleoplasm and its novel link to cellular sensitivity to DNA damage. DNA Repair (Amst) 2009; 8:286-297; PMID:19144573; http://dx.doi.org/10.1016/j.dnarep.2008.11.018.
    • (2009) DNA Repair (Amst) , vol.8 , pp. 286-297
    • Rancourt, A.1    Satoh, M.S.2
  • 32
    • 84859051225 scopus 로고    scopus 로고
    • Inheritance of silent rDNA chromatin is mediated by PARP1 via noncoding RNA
    • PMID:22405650
    • Guetg C, Scheifele F, Rosenthal F, Hottiger MO, Santoro R. Inheritance of silent rDNA chromatin is mediated by PARP1 via noncoding RNA. Mol Cell 2012; 45:790-800; PMID:22405650; http://dx.doi.org/10.1016/j.molcel.2012.01.024.
    • (2012) Mol Cell , vol.45 , pp. 790-800
    • Guetg, C.1    Scheifele, F.2    Rosenthal, F.3    Hottiger, M.O.4    Santoro, R.5
  • 33
    • 34250359929 scopus 로고    scopus 로고
    • Poly(ADP-ribose) polymerase 1 is inhibited by a histone H2A variant, MacroH2A and contributes to silencing of the inactive X chromosome
    • PMID:17322296
    • Nusinow DA, Hernández-Muñoz I, Fazzio TG, Shah GM, Kraus WL, Panning B. Poly(ADP-ribose) polymerase 1 is inhibited by a histone H2A variant, MacroH2A and contributes to silencing of the inactive X chromosome. J Biol Chem 2007; 282:12851-12851; PMID:17322296; http://dx.doi.org/10.1074/jbc.M610502200.
    • (2007) J Biol Chem , vol.282 , pp. 12851
    • Nusinow, D.A.1    Hernández-Muñoz, I.2    Fazzio, T.G.3    Shah, G.M.4    Kraus, W.L.5    Panning, B.6
  • 34
    • 79955507553 scopus 로고    scopus 로고
    • Maintenance of silent chromatin through replication requires SWI/SNFlike chromatin remodeler SMARCAD1
    • PMID:21549307
    • Rowbotham SP, Barki L, Neves-Costa A, Santos F, Dean W, Hawkes N, et al. Maintenance of silent chromatin through replication requires SWI/SNFlike chromatin remodeler SMARCAD1. Mol Cell 2011; 42:285-296; PMID:21549307; http://dx.doi.org/10.1016/j.molcel.2011.02.036.
    • (2011) Mol Cell , vol.42 , pp. 285-296
    • Rowbotham, S.P.1    Barki, L.2    Neves-Costa, A.3    Santos, F.4    Dean, W.5    Hawkes, N.6


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