Multiway investigation of interaction between fluorescence labeled DNA strands and unmodified gold nanoparticles

Analytical Chemistry

Volumn 84, Issue 15, 2012, Pages 6603-6610

  Akhlaghi, Yousef ^a   Kompany Zareh, Mohsen ^a   Hormozi Nezhad, Mohammad Reza ^b  

^a INSTITUTE FOR ADVANCED STUDIES IN BASIC SCIENCES IASBS   (Iran)

^b SHARIF UNIVERSITY OF TECHNOLOGY   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOMETRICES; CONCENTRATION PROFILES; DATA SETS; DNA HYBRIDIZATION; DNA STRANDS; DOUBLE STRANDED DNA; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT DYES; GOLD NANOPARTICLE; GOLD NANOPARTICLES; INTERPRETABILITY; NEGATIVELY CHARGED SURFACES; PARAFAC; PLASMON EFFECTS; ROTATIONAL FREEDOM; SINGLE-STRANDED DNA;

ADSORPTION; ENERGY TRANSFER; FLUORESCENCE; METAL NANOPARTICLES; OLIGONUCLEOTIDES;

DNA;

FLUORESCENT DYE; GOLD; METAL NANOPARTICLE; VIRUS DNA;

ARTICLE; CHEMISTRY; FLUORESCENCE RESONANCE ENERGY TRANSFER; GENETICS; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS; METABOLISM; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE PROBE;

DNA, VIRAL; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT DYES; GOLD; HIV; HUMANS; METAL NANOPARTICLES; NUCLEIC ACID HYBRIDIZATION; OLIGONUCLEOTIDE PROBES;

EID: 84864619201     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac3008576     Document Type: Article

References (44)

1. Sassolas, A.; Leca-Bouvier, B. D.; Blum, L. J. Chem. Rev. 2008, 108, 109
2. Epstein, J. R.; Biran, I.; Walt, D. R. Anal. Chim. Acta 2002, 469, 3-36
3. Jiang, G.; Susha, A. S.; Lutich, A. A.; Stefani, F. D.; Feldmann, J.; Rogach, A. L. ACS Nano 2009, 3, 4127-4131
4. Dong, H.; Gao, W.; Yan, F.; Ji, H.; Ju, H. Anal. Chem. 2010, 82, 5511-5517
5. Al Attar, H. A.; Monkman, A. P. Biomacromolecules 2009, 10, 1077-1083
6. Algar, W. R.; Krull, U. J. Anal. Chim. Acta 2007, 581, 193-201
7. Algar, W. R.; Krull, U. J. Langmuir 2008, 25, 633-638
8. Gao, F.; Cui, P.; Chen, X.; Ye, Q.; Li, M.; Wang, L. Analyst 2011, 136, 3973-3980
9. Sperling, R. A.; Gil, P. R.; Zhang, F.; Zanella, M.; Parak, W. J. Chem. Soc. Rev. 2008, 37, 1896-1908
10. Sepulveda, B.; Angelome, P. C.; Lechuga, L. M.; Liz-Marzan, L. M. Nano Today 2009, 4, 244-251
11. Cheng, Y.; Stakenborg, T.; Van Dorpe, P.; Lagae, L.; Wang, M.; Chen, H.; Borghs, G. Anal. Chem. 2011, 83, 1307-1314
12. Adams, N. M.; Jackson, S. R.; Haselton, F. R.; Wright, D. W. Langmuir 2012, 28, 1068-1082
13. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Storhoff, J. J. Nature 1996, 382, 607-609
14. Li, H.; Rothberg, L. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 14036
15. Li, H.; Rothberg, L. J. J. Am. Chem. Soc. 2004, 126, 10958-10961
16. Nelson, E. M.; Rothberg, L. J. Langmuir 2011, 27, 1770-1777
17. Li, H.; Rothberg, L. Anal. Chem. 2005, 77, 6229-6233
18. Dubertret, B.; Calame, M.; Libchaber, A. J. Nat. Biotechnol. 2001, 19, 365-370
19. Ray, P. C.; Fortner, A.; Darbha, G. K. J. Phys. Chem. B 2006, 110, 20745-20748
20. Du, H.; Disney, M. D.; Miller, B. L.; Krauss, T. D. J. Am. Chem. Soc. 2003, 125, 4012-4013
21. Ray, P. C.; Darbha, G. K.; Ray, A.; Hardy, W.; Walker, J. Nanotechnology 2007, 18, 375504
22. Li, H.; Rothberg, L. J. Anal. Chem. 2004, 76, 5414-5417
23. Li, H.; Liang, R.; Turner, D. H.; Rothberg, L. J.; Duan, S. RNA 2007, 13, 2034-2041
24. Tan, Y. N.; Lee, K. H.; Su, X. Anal. Chem. 2011, 83, 4251-4257
25. Tucker, L. R. Psychometrika 1966, 31, 279-311
26. Carroll, J. D.; Chang, J. J. Psychometrika 1970, 35, 283-319
27. Harshman, R. A. UCLA Working Papers in Phonetics 1970, 16, 1-84
28. Smilde, A. K.; Bro, R.; Geladi, P.; Wiley, J. Multi-Way Analysis with Applications in the Chemical Sciences; Wiley Online Library: Hoboken, NJ, 2004.
29. Bro, R.; Harshman, R. A.; Sidiropoulos, N. D.; Lundy, M. E. J. Chemom. 2009, 23, 324-340
30. Bahram, M.; Bro, R. Anal. Chim. Acta 2007, 584, 397-402
31. Chen, H.; Zheng, B.; Song, Y. J. Chemom. 2011, 25, 20-27
32. Chen, H.; Kenny, J. E. Analyst 2012, 137, 153-162
33. Smilde, A. K.; Wang, Y.; Kowalski, B. R. J. Chemom. 1994, 8, 21-36
34. Kiers, H. A. L.; Smilde, A. K. J. Chemom. 1998, 12, 125-147
35. Ten Berge, J. M. F.; Kiers, H. A. L. Linear Algebra Appl. 1999, 294, 169-179
36. Smilde, A. K.; Tauler, R.; Henshaw, J. M.; Burgess, L. W.; Kowalski, B. R. Anal. Chem. 1994, 66, 3345-3351
37. Kompany-Zareh, M.; Akhlaghi, Y.; Bro, R. Anal. Chim. Acta 2012, 723, 18-26
38. Grabar, K. C.; Freeman, R. G.; Hommer, M. B.; Natan, M. J. Anal. Chem. 1995, 67, 735-743
39. Thygesen, L. G.; Rinnan, Å.; Barsberg, S.; Møller, J. K. S. Chemom. Intell. Lab. Syst. 2004, 71, 97-106
40. Rinnan, Å.; Andersen, C. M. Chemom. Intell. Lab. Syst. 2005, 76, 91-99
41. Kiers, H. A. L. Psychometrika 1997, 62, 251-266
42. Andersson, C. A.; Bro, R. Chemom. Intell. Lab. Syst. 2000, 52, 1-4
43. Marras, S. A. E.; Kramer, F. R.; Tyagi, S. Nucleic Acids Res. 2002, 30, e122-e122
44. Bro, R.; Kiers, H. A. L. J. Chemom. 2003, 17, 274-286