Investigation of four porcine candidate genes (H-FABP, MYOD1, UCP3 and MASTR) for meat quality traits in Large White pigs

Molecular Biology Reports

Volumn 39, Issue 6, 2012, Pages 6599-6605

  Han, Xuelei ^a   Jiang, Tengfei ^a   Yang, Huawei ^a   Zhang, Qingde ^a   Wang, Weimin ^a   Fan, Bin ^a   Liu, Bang ^a  

^a HUAZHONG AGRICULTURAL UNIVERSITY   (China)

Author keywords

H FABP; IMF; MASTR; Multiple marker analysis; MYOD1; UCP3

Indexed keywords

UNCOUPLING PROTEIN 3;

5' UNTRANSLATED REGION; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; EXON; FOOD QUALITY; GENE; GENE FREQUENCY; GENE IDENTIFICATION; GENETIC ASSOCIATION; GENETIC MARKER; GENETIC TRAIT; GENOTYPE; HEART FATTY ACID BINDING PROTEIN GENE; LIPID COMPOSITION; MEAT; MEF2 ACTIVATING MOTIF AND SAP DOMAIN CONTAINING TRANSCRIPTIONAL REGULATOR GENE; MYOGENIC DIFFERENTIATION 1 GENE; NONHUMAN; QUANTITATIVE TRAIT; SINGLE NUCLEOTIDE POLYMORPHISM; SWINE; UNCOUPLING PROTEIN 3 GENE;

5' UNTRANSLATED REGIONS; ANIMALS; FATTY ACID-BINDING PROTEINS; FOOD TECHNOLOGY; GENE FREQUENCY; GENETIC ASSOCIATION STUDIES; GENETIC MARKERS; GENOTYPE; ION CHANNELS; LINEAR MODELS; MEAT; MITOCHONDRIAL PROTEINS; MYOD PROTEIN; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA; SUS SCROFA; TRANS-ACTIVATORS;

PIERIS BRASSICAE; SUIDAE; SUS;

EID: 84864283765     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-012-1490-6     Document Type: Article

References (45)

1. De Vries AG, Van der Wal PG, Long T, Eikelenboom G, Merks JWM (1994) Genetic parameters of pork quality and production traits in Yorkshire populations. Livest Prod Sci 40:277-289
2. Gao SZ, Zhao SM (2009) Physiology, affecting factors and strategies for control of pig meat intramuscular fat. Recent Pat Food Nutr Agric 1:59-74
3. Ciobanu D, Bastiaansen J, Malek M, Helm J, Woollard J, Plastow G, Rothschild M (2001) Evidence for new alleles in the protein kinase adenosine monophosphate-activated gamma(3)-subunit gene associated with low glycogen content in pig skeletal muscle and improved meat quality. Genetics 159:1151-1162 (Pubitemid 34033457)
4. Ciobanu DC, Bastiaansen JW, Lonergan SM, Thomsen H, Dekkers JC, Plastow GS, Rothschild MF (2004) New alleles in cal-pastatin gene are associated with meat quality traits in pigs. J Anim Sci 82:2829-2839 (Pubitemid 39290075)
5. Fujii J, Otsu K, Zorzato F, de Leon S, Khanna VK, Weiler JE, O'Brien PJ, MacLennan DH (1991) Identification of a mutation in porcine ryanodine receptor associated with malignant hyper-thermia. Science 253:448-451 (Pubitemid 21917175)
6. Kim KS, Larsen N, Short T, Plastow G, Rothschild MF (2000) A missense variant of the porcine melanocortin-4 receptor (MC4R) gene is associated with fatness, growth, and feed intake traits. Mamm Genome 11:131-135 (Pubitemid 30054415)
7. Li X, Kim SW, Choi JS, Lee YM, Lee CK, Choi BH, Kim TH, Choi YI, Kim JJ, Kim KS (2010) Investigation of porcine FABP3 and LEPR gene polymorphisms and mRNA expression for variation in intramuscular fat content. Mol Biol Rep 37:3931-3939
8. Srikanchai T, Murani E, Wimmers K, Ponsuksili S (2010) Four loci differentially expressed in muscle tissue depending on waterholding capacity are associated with meat quality in commercial pig herds. Mol Biol Rep 37:595-601
9. Binas B, Danneberg H, McWhir J, Mullins L, Clark AJ (1999) Requirement for the heart-type fatty acid binding protein in cardiac fatty acid utilization. FASEB J 13:805-812 (Pubitemid 29220693)
10. Schaap FG, Binas B, Danneberg H, van der Vusse GJ, Glatz JF (1999) Impaired long-chain fatty acid utilization by cardiac myocytes isolated from mice lacking the heart-type fatty acid binding protein gene. Circ Res 85:329-337 (Pubitemid 29398865)
11. Chmurzynska A (2006) The multigene family of fatty acid-binding proteins (FABPs): function, structure and polymorphism. J Appl Genet 47:39-48 (Pubitemid 43232158)
12. Gerbens F, Verburg FJ, Van Moerkerk HT, Engel B, Buist W, Veerkamp JH, te Pas MF (2001) Associations of heart and adi-pocyte fatty acid-binding protein gene expression with intramuscular fat content in pigs. J Anim Sci 79:347-354 (Pubitemid 33614469)
13. Gerbens F, de Koning DJ, Harders FL, Meuwissen TH, Janss LL, Groenen MA, Veerkamp JH, Van Arendonk JA, te Pas MF (2000) The effect of adipocyte and heart fatty acid-binding pro tein genes on intramuscular fat and backfat content in Meishan crossbred pigs. J Anim Sci 78:552-559
14. Berkes CA, Tapscott SJ (2005) MyoD and the transcriptional control of myogenesis. Semin Cell Dev Biol 16:585-595 (Pubitemid 41247882)
15. Cepica S, Yerle M, Stratil A, Schroffel J, Redl B (1999) Regional localization of porcine MYOD1, MYF5, LEP, UCP3 and LCN1 genes. Anim Genet 30:476-478
16. Soumillion A, Rettenberger G, Vergouwe MN, Erkens JH, Lenstra JA, te Pas MF (1997) Assignment of the porcine loci for MYOD1 to chromosome 2 and MYF5 to chromosome 5. Anim Genet 28:37-38 (Pubitemid 27152933)
17. Cieślak D, Kapelański W, Blicharski T, Pierzchała M (2000) Restriction fragment length polymorphisms in myogenin and myf3 genes and their influence on lean meat content in pigs. J Anim Breed Genet 117:43-55
18. Cieślak D, Kuryl J, Kapelański W, Pierzchała M, Grajewska S, Bocian M (2002) A relationship between genotypes at MYOG, MYF3, and MYF5 loci and carcass meat and fat deposition traits in pigs. Anim Sci Pap Rep 20:77-92
19. Otabe S, Clement K, Dina C, Pelloux V, Guy-Grand B, Froguel P, Vasseur F (2000) A genetic variation in the 5′ flanking region of the UCP3 gene is associated with body mass index in humans in interaction with physical activity. Diabetologia 43:245-249 (Pubitemid 30126832)
20. Werner P, Neuenschwander S, Stranzinger G (1999) Characterization of the porcine uncoupling proteins 2 and 3 (UCP2 & UCP3) and their localization to chromosome 9 p by somatic cell hybrids. Anim Genet 30:221-224 (Pubitemid 29350933)
21. Damon M, Louveau I, Lefaucheur L, Lebret B, Vincent A, Leroy P, Sanchez MP, Herpin P, Gondret F (2006) Number of intramuscular adipocytes and fatty acid binding protein-4 content are significant indicators of intramuscular fat level in crossbred Large White x Duroc pigs. J Anim Sci 84:1083-1092 (Pubitemid 44405611)
22. Mostyn A, Litten JC, Perkins KS, Alves-Guerra MC, Pecqueur C, Miroux B, Symonds ME, Clarke L (2004) Influence ofgenotype on the differential ontogeny of uncoupling protein 2 and 3 in subcutaneous adipose tissue and muscle in neonatal pigs. J Endocrinol 183:121-131 (Pubitemid 40124649)
23. Li H, Brahi OH, Zhao X, Xu N (2011) Association of pig UCP3 gene mutations and back fat thickness in the sixth and seventh rib. Mol Biol Rep Epub ahead of print
24. Hopwood ND, Pluck A, Gurdon JB (1991) Xenopus Myf-5 marks early muscle cells and can activate muscle genes ectopically in early embryos. Development 111:551-560 (Pubitemid 21920437)
25. Meadows SM, Warkman AS, Salanga MC, Small EM, Krieg PA (2008) The myocardin-related transcription factor, MASTR, cooperates with MyoD to activate skeletal muscle gene expression. Proc Natl Acad Sci USA 105:1545-1550 (Pubitemid 351346551)
26. Chambers AE, Logan M, Kotecha S, Towers N, Sparrow D, Mohun TJ (1994) The RSRF/MEF2 protein SL1 regulates cardiac muscle-specific transcription of a myosin light-chain gene in Xenopus embryos. Genes Dev 8:1324-1334 (Pubitemid 24181323)
27. Li S, Wang DZ, Wang Z, Richardson JA, Olson EN (2003) The serum response factor coactivator myocardin is required for vascular smooth muscle development. Proc Natl Acad Sci USA 100:9366-9370 (Pubitemid 37033934)
28. Creemers EE, Sutherland LB, Oh J, Barbosa AC, Olson EN (2006) Coactivation of MEF2 by the SAP domain proteins myocardin and MASTR. Mol Cell 23:83-96 (Pubitemid 43963447)
29. Jiang Z, Michal JJ, Chen J, Daniels TF, Kunej T, Garcia MD, Gaskins CT, Busboom JR, Alexander LJ, Wright RW Jr, Macneil MD (2009) Discovery of novel genetic networks associated with 19 economically important traits in beef cattle. Int J Biol Sci 5:528-542
30. Spener FUC, Börchers T, Grosse R (1990) Characteristics of fatty acid-binding proteins and their relation to mammary-derived growth inhibitor. Mol Cell Biochem 98:57-68 (Pubitemid 20309216)
31. Arnyasi M, Grindflek E, Javor A, Lien S (2006) Investigation of two candidate genes for meat quality traits in a quantitative trait locus region on SSC6: the porcine short heterodimer partner and heart fatty acid binding protein genes. J Anim Breed Genet 123:198-203
32. Grindflek E, Szyda J, Liu Z, Lien S (2001) Detection of quantitative trait loci for meat quality in a commercial slaughter pig cross. Mamm Genome 12:299-304 (Pubitemid 32242890)
33. Gerbens F, Jansen A, van Erp AJ, Harders F, Meuwissen TH, Rettenberger G, Veerkamp JH, te Pas MF (1998) The adipocyte fatty acid-binding protein locus: characterization and association with intramuscular fat content in pigs. Mamm Genome 9:1022-1026 (Pubitemid 29030907)
34. Gerbens F, van Erp AJ, Harders FL, Verburg FJ, Meuwissen TH, Veerkamp JH, te Pas MF (1999) Effect of genetic variants of the heart fatty acid-binding protein gene on intramuscular fat and performance traits in pigs. J Anim Sci 77:846-852 (Pubitemid 129558799)
35. Cho KH, Kim MJ, Jeon GJ, Chung HY (2011) Association of genetic variants for FABP3 gene with back fat thickness and intramuscular fat content in pig. Mol Biol Rep 38:2161-2166
36. Glatz JF, Schaap FG, Binas B, Bonen A, Van Der Vusse GJ, Luiken JJ (2003) Cytoplasmic fatty acid-binding protein facilitates fatty acid utilization by skeletal muscle. Acta Physiol Scand 178:367-371 (Pubitemid 36960427)
37. Gardan D, Louveau I, Gondret F (2007) Adipocyte-and heart-type fatty acid binding proteins are both expressed in subcutaneous and intramuscular porcine (Sus scrofa) adipocytes. Comp Biochem Physiol B Biochem Mol Biol 148:14-19 (Pubitemid 47089048)
38. Chen CH, Lin EC, Cheng WT, Sun HS, Mersmann HJ, Ding ST (2006) Abundantly expressed genes in pig adipose tissue: an expressed sequence tag approach. J Anim Sci 84:2673-2683 (Pubitemid 44505428)
39. de Koning DJ, Rattink AP, Harlizius B, van Arendonk JA, Brascamp EW, Groenen MA (2000) Genome-wide scan for body composition in pigs reveals important role of imprinting. Proc Natl Acad Sci USA 97:7947-7950 (Pubitemid 30460753)
40. Malek M, Dekkers JC, Lee HK, Baas TJ, Rothschild MF (2001) A molecular genome scan analysis to identify chromosomal regions influencing economic traits in the pig. I. growth and body composition. Mamm Genome 12:630-636 (Pubitemid 32675531)
41. Malek M, Dekkers JC, Lee HK, Baas TJ, Prusa K, Huff-Lonergan E, Rothschild MF (2001) A molecular genome scan analysis to identify chromosomal regions influencing economic traits in the pig. II. meat and muscle composition. Mamm Genome 12:637-645 (Pubitemid 32675532)
42. Lee SNJ, Gunasekaran S, van Laack RLJM, Kim BC, Kauffman RG (2000) Use of electrical conductivity to predict water-holding capacity in post-rigor pork. Meat Sci 55:385-389
43. Ponsuksili S, Murani E, Phatsara C, Schwerin M, Schellander K, Wimmers K (2009) Porcine muscle sensory attributes associate with major changes in gene networks involving CAPZB, ANKRD1, and CTBP2. Funct Integr Genomics 9:455-471
44. Choe JH, Choi YM, Lee SH, Shin HG, Ryu YC, Hong KC, Kim BC (2008) The relation between glycogen, lactate content and muscle fiber type composition, and their influence on postmortem glycolytic rate and pork quality. Meat Sci 80:355-362
45. Henckel P, Karlsson A, Oksbjerg N, Petersen JS (2000) Control of post mortem pH decrease in pig muscles: experimental design and testing of animal models. Meat Sci 55:131-138