-
1
-
-
34447528966
-
RNA-based regulation of genes of tryptophan synthesis and degradation, in bacteria
-
Yanofsky C, (2007) RNA-based regulation of genes of tryptophan synthesis and degradation, in bacteria. RNA 13: 1141-1154.
-
(2007)
RNA
, vol.13
, pp. 1141-1154
-
-
Yanofsky, C.1
-
2
-
-
79960395328
-
Bacterial transcription terminators: the RNA 3′-end chronicles
-
Peters JM, Vangeloff AD, Landick R, (2011) Bacterial transcription terminators: the RNA 3′-end chronicles. J Mol Biol 412: 793-813.
-
(2011)
J Mol Biol
, vol.412
, pp. 793-813
-
-
Peters, J.M.1
Vangeloff, A.D.2
Landick, R.3
-
3
-
-
0035984639
-
Regulation by transcription attenuation in bacteria: how RNA provides instructions for transcription termination/antitermination decisions
-
Henkin TM, Yanofsky C, (2002) Regulation by transcription attenuation in bacteria: how RNA provides instructions for transcription termination/antitermination decisions. Bio Essays 24: 700-707.
-
(2002)
Bio Essays
, vol.24
, pp. 700-707
-
-
Henkin, T.M.1
Yanofsky, C.2
-
4
-
-
67650713931
-
The structural and functional diversity of metabolite-binding riboswitches
-
Roth A, Breaker RR, (2009) The structural and functional diversity of metabolite-binding riboswitches. Annu Rev Biochem 78: 305-334.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 305-334
-
-
Roth, A.1
Breaker, R.R.2
-
5
-
-
63849299263
-
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism
-
Gutiérrez-Preciado A, Henkin TM, Grundy FJ, Yanofsky C, Merino E, (2009) Biochemical features and functional implications of the RNA-based T-box regulatory mechanism. Microbiol Mol Biol Rev 73: 36-61.
-
(2009)
Microbiol Mol Biol Rev
, vol.73
, pp. 36-61
-
-
Gutiérrez-Preciado, A.1
Henkin, T.M.2
Grundy, F.J.3
Yanofsky, C.4
Merino, E.5
-
6
-
-
84864064270
-
The mechanism for RNA recognition by ANTAR regulators of gene expression
-
doi:10.1371/journal.pgen.1002666
-
Ramesh A, DebRoy S, Goodson JR, Fox KA, Faz H, et al. (2012) The mechanism for RNA recognition by ANTAR regulators of gene expression. PLoS Genet 8: e1002666 doi:10.1371/journal.pgen.1002666.
-
(2012)
PLoS Genet
, vol.8
-
-
Ramesh, A.1
DebRoy, S.2
Goodson, J.R.3
Fox, K.A.4
Faz, H.5
-
7
-
-
0024507985
-
Positive control of Pseudomonas aeruginosa amidase synthesis is mediated by a transcription anti-termination mechanism
-
Drew R, Lowe N, (1989) Positive control of Pseudomonas aeruginosa amidase synthesis is mediated by a transcription anti-termination mechanism. J Gen Microbiol 135: 817-823.
-
(1989)
J Gen Microbiol
, vol.135
, pp. 817-823
-
-
Drew, R.1
Lowe, N.2
-
8
-
-
0029994193
-
Transcription antitermination regulation of the Pseudomonas aeruginosa amidase operon
-
Wilson SA, Wachira SJM, Norman RA, Pearl LH, Drew RE, (1996) Transcription antitermination regulation of the Pseudomonas aeruginosa amidase operon. EMBO J 15: 5907-5916.
-
(1996)
EMBO J
, vol.15
, pp. 5907-5916
-
-
Wilson, S.A.1
Wachira, S.J.M.2
Norman, R.A.3
Pearl, L.H.4
Drew, R.E.5
-
9
-
-
0028122390
-
Identification and structure of the nasR gene encoding a nitrate- and nitrite-responsive positive regulator of nasFEDCBA (nitrate assimilation) operon expression in Klebsiella pneumoniae M5al
-
Goldman BS, Lin JT, Stewart V, (1994) Identification and structure of the nasR gene encoding a nitrate- and nitrite-responsive positive regulator of nasFEDCBA (nitrate assimilation) operon expression in Klebsiella pneumoniae M5al. J Bacteriol 176: 5077-5085.
-
(1994)
J Bacteriol
, vol.176
, pp. 5077-5085
-
-
Goldman, B.S.1
Lin, J.T.2
Stewart, V.3
-
10
-
-
0030004961
-
Nitrate and nitrite-mediated transcription antitermination control of nasF (nitrate assimilation) operon expression in Klebsiella pneumoniae M5al
-
Lin JT, Stewart V, (1996) Nitrate and nitrite-mediated transcription antitermination control of nasF (nitrate assimilation) operon expression in Klebsiella pneumoniae M5al. J Mol Biol 256: 423-435.
-
(1996)
J Mol Biol
, vol.256
, pp. 423-435
-
-
Lin, J.T.1
Stewart, V.2
-
11
-
-
0036160325
-
ANTAR: an RNA-binding domain in transcription antitermination regulatory proteins
-
Shu CJ, Zhulin IB, (2002) ANTAR: an RNA-binding domain in transcription antitermination regulatory proteins. Trends Biochem Sci 27: 3-5.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 3-5
-
-
Shu, C.J.1
Zhulin, I.B.2
-
12
-
-
0034730522
-
Steric hindrance regulation of the Pseudomonas aeruginosa amidase operon
-
Norman RA, Poh CL, Pearl LH, O'Hara BP, Drew RE, (2000) Steric hindrance regulation of the Pseudomonas aeruginosa amidase operon. J Biol Chem 275: 30660-30667.
-
(2000)
J Biol Chem
, vol.275
, pp. 30660-30667
-
-
Norman, R.A.1
Poh, C.L.2
Pearl, L.H.3
O'Hara, B.P.4
Drew, R.E.5
-
13
-
-
0033214785
-
Crystal structure and induction mechanism of AmiC-AmiR: a ligand-regulated transcription antitermination complex
-
O'Hara BP, Norman RA, Wan PT, Roe SM, Barrett TE, et al. (1999) Crystal structure and induction mechanism of AmiC-AmiR: a ligand-regulated transcription antitermination complex. EMBO J 18: 5175-5186.
-
(1999)
EMBO J
, vol.18
, pp. 5175-5186
-
-
O'Hara, B.P.1
Norman, R.A.2
Wan, P.T.3
Roe, S.M.4
Barrett, T.E.5
-
14
-
-
0032561133
-
NasR, a novel RNA-binding protein, mediates nitrate-responsive transcription antitermination of the Klebsiella oxytoca M5al nasF operon leader in vitro
-
Chai W, Stewart V, (1998) NasR, a novel RNA-binding protein, mediates nitrate-responsive transcription antitermination of the Klebsiella oxytoca M5al nasF operon leader in vitro. J Mol Biol 283: 339-351.
-
(1998)
J Mol Biol
, vol.283
, pp. 339-351
-
-
Chai, W.1
Stewart, V.2
-
15
-
-
0037333759
-
The NIT domain: a predicted nitrate-responsive module in bacterial sensory receptors
-
Shu CJ, Ulrich LE, Zhulin IB, (2003) The NIT domain: a predicted nitrate-responsive module in bacterial sensory receptors. Trends Biochem Sci 28: 121-124.
-
(2003)
Trends Biochem Sci
, vol.28
, pp. 121-124
-
-
Shu, C.J.1
Ulrich, L.E.2
Zhulin, I.B.3
-
16
-
-
0033578787
-
RNA sequence requirements for NasR-mediated, nitrate-responsive transcription antitermination of the Klebsiella oxytoca M5al nasF operon leader
-
Chai W, Stewart V, (1999) RNA sequence requirements for NasR-mediated, nitrate-responsive transcription antitermination of the Klebsiella oxytoca M5al nasF operon leader. J Mol Biol 292: 203-216.
-
(1999)
J Mol Biol
, vol.292
, pp. 203-216
-
-
Chai, W.1
Stewart, V.2
-
17
-
-
77949880884
-
Receiver domain structure and function in response regulator proteins
-
Bourret RB, (2010) Receiver domain structure and function in response regulator proteins. Curr Opin Microbiol 13: 142-149.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 142-149
-
-
Bourret, R.B.1
-
18
-
-
55749109226
-
Ethanolamine activates a sensor histidine kinase regulating its utilization in Enterococcus faecalis
-
Del Papa MF, Perego M, (2008) Ethanolamine activates a sensor histidine kinase regulating its utilization in Enterococcus faecalis. J Bacteriol 190: 7147-7156.
-
(2008)
J Bacteriol
, vol.190
, pp. 7147-7156
-
-
Del Papa, M.F.1
Perego, M.2
-
19
-
-
63149194170
-
Multiple posttranscriptional regulatory mechanisms partner to control ethanolamine utilization in Enterococcus faecalis
-
Fox KA, Ramesh A, Stearns JE, Bourgogne A, Reyes-Jara A, et al. (2009) Multiple posttranscriptional regulatory mechanisms partner to control ethanolamine utilization in Enterococcus faecalis. Proc Natl Acad Sci USA 106: 4435-4440.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 4435-4440
-
-
Fox, K.A.1
Ramesh, A.2
Stearns, J.E.3
Bourgogne, A.4
Reyes-Jara, A.5
-
20
-
-
79956080756
-
Transcription antitermination by a phosphorylated response regulator and cobalamin-dependent termination at a B12 riboswitch contribute to ethanolamine utilization in Enterococcus faecalis
-
Baker KA, Perego M, (2011) Transcription antitermination by a phosphorylated response regulator and cobalamin-dependent termination at a B12 riboswitch contribute to ethanolamine utilization in Enterococcus faecalis. J Bacteriol 193: 2575-2586.
-
(2011)
J Bacteriol
, vol.193
, pp. 2575-2586
-
-
Baker, K.A.1
Perego, M.2
-
21
-
-
0035695915
-
Structural insights into the regulation of bacterial signalling proteins containing PRDs
-
van Tilbeurgh H, Declerck N, (2001) Structural insights into the regulation of bacterial signalling proteins containing PRDs. Curr Opin Struct Biol 11: 685-693.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 685-693
-
-
van Tilbeurgh, H.1
Declerck, N.2
-
22
-
-
0025052636
-
Transcriptional antitermination in the bgl operon of E. coli is modulated by a specific RNA binding protein
-
Houman F, Diaz-Torres MR, Wright A, (1990) Transcriptional antitermination in the bgl operon of E. coli is modulated by a specific RNA binding protein. Cell 62: 1153-1163.
-
(1990)
Cell
, vol.62
, pp. 1153-1163
-
-
Houman, F.1
Diaz-Torres, M.R.2
Wright, A.3
-
23
-
-
0030832399
-
Crystal structure of a new RNA-binding domain from the antiterminator protein SacY of Bacillus subtilis
-
van Tilbeurgh H, Manival X, Aymerich S, Lhoste JM, Dumas C, et al. (1997) Crystal structure of a new RNA-binding domain from the antiterminator protein SacY of Bacillus subtilis. EMBO J 16: 5030-5036.
-
(1997)
EMBO J
, vol.16
, pp. 5030-5036
-
-
van Tilbeurgh, H.1
Manival, X.2
Aymerich, S.3
Lhoste, J.M.4
Dumas, C.5
-
24
-
-
17644378441
-
Activation of the LicT transcriptional antiterminator involves a domain swing/lock mechanism provoking massive structural changes
-
Graille M, Zhou CZ, Receveur-Bréchot V, Collinet B, Declerck N, et al. (2005) Activation of the LicT transcriptional antiterminator involves a domain swing/lock mechanism provoking massive structural changes. J Biol Chem 280: 14780-14789.
-
(2005)
J Biol Chem
, vol.280
, pp. 14780-14789
-
-
Graille, M.1
Zhou, C.Z.2
Receveur-Bréchot, V.3
Collinet, B.4
Declerck, N.5
-
25
-
-
0037090685
-
Solution structure of the LicT-RNA antitermination complex: CAT clamping RAT
-
Yang Y, Declerck N, Manival X, Aymerich S, Kochoyan M, (2002) Solution structure of the LicT-RNA antitermination complex: CAT clamping RAT. EMBO J 21: 1987-1997.
-
(2002)
EMBO J
, vol.21
, pp. 1987-1997
-
-
Yang, Y.1
Declerck, N.2
Manival, X.3
Aymerich, S.4
Kochoyan, M.5
-
26
-
-
4444249928
-
The crystal and solution structure of a putative transcriptional antiterminator from Mycobacterium tuberculosis
-
Morth JP, Feng V, Perry LJ, Svergun DI, Tucker PA, (2004) The crystal and solution structure of a putative transcriptional antiterminator from Mycobacterium tuberculosis. Structure 12: 1595-1605.
-
(2004)
Structure
, vol.12
, pp. 1595-1605
-
-
Morth, J.P.1
Feng, V.2
Perry, L.J.3
Svergun, D.I.4
Tucker, P.A.5
-
27
-
-
84864096708
-
Structure of the NasR transcription antiterminator reveals a one-component system with a NIT nitrate-receptor coupled to an ANTAR RNA-binding effector
-
In press
-
Boudes M, Lazar N, Durand D, Gaidenko TA, Stewart V, et al. (2012) Structure of the NasR transcription antiterminator reveals a one-component system with a NIT nitrate-receptor coupled to an ANTAR RNA-binding effector. Mol Microbiol In press.
-
(2012)
Mol Microbiol
-
-
Boudes, M.1
Lazar, N.2
Durand, D.3
Gaidenko, T.A.4
Stewart, V.5
-
28
-
-
67650424330
-
6S RNA binding to Esigma(70) requires a positively charged surface of sigma(70) region 4.2
-
Klocko AD, Wassarman KM, (2009) 6S RNA binding to Esigma(70) requires a positively charged surface of sigma(70) region 4.2. Mol Microbiol 73: 152-164.
-
(2009)
Mol Microbiol
, vol.73
, pp. 152-164
-
-
Klocko, A.D.1
Wassarman, K.M.2
-
29
-
-
0035896023
-
Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle
-
Batey RT, Sagar MB, Doudna JA, (2001) Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle. J Mol Biol 307: 229-246.
-
(2001)
J Mol Biol
, vol.307
, pp. 229-246
-
-
Batey, R.T.1
Sagar, M.B.2
Doudna, J.A.3
|