메뉴 건너뛰기




Volumn 193, Issue 10, 2011, Pages 2575-2586

Transcription antitermination by a phosphorylated response regulator and cobalamin-dependent termination at a B12 riboswitch contribute to ethanolamine utilization in Enterococcus faecalis

Author keywords

[No Author keywords available]

Indexed keywords

BETA GALACTOSIDASE; COBALAMIN; COMPLEMENTARY DNA; ETHANOLAMINE; RHO FACTOR;

EID: 79956080756     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00217-11     Document Type: Article
Times cited : (16)

References (45)
  • 1
    • 23144463910 scopus 로고    scopus 로고
    • RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements
    • Abreu-Goodger, C., and E. Merino. 2005. RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements. Nucleic Acids Res. 33:W690-W692.
    • (2005) Nucleic Acids Res , vol.33
    • Abreu-Goodger, C.1    Merino, E.2
  • 2
    • 0002229692 scopus 로고
    • Biogenic amines in lactic acid-fermented vegetables
    • Anderson, R. 1988. Biogenic amines in lactic acid-fermented vegetables. Lebenson. Wiss. Technol. 21:68-69.
    • (1988) Lebenson. Wiss. Technol. , vol.21 , pp. 68-69
    • Anderson, R.1
  • 3
    • 0035954304 scopus 로고    scopus 로고
    • Novel small RNA-encoding genes in the intergenic regions of Escherichia coli
    • Argaman, L., et al. 2001. Novel small RNA-encoding genes in the intergenic regions of Escherichia coli. Curr. Biol. 11:941-950.
    • (2001) Curr. Biol. , vol.11 , pp. 941-950
    • Argaman, L.1
  • 4
    • 57349085197 scopus 로고    scopus 로고
    • In vitro approaches to analysis of transcription termination
    • Artsimovitch, I., and T. M. Henkin. 2009. In vitro approaches to analysis of transcription termination. Methods 47:37-43.
    • (2009) Methods , vol.47 , pp. 37-43
    • Artsimovitch, I.1    Henkin, T.M.2
  • 5
    • 46349083026 scopus 로고    scopus 로고
    • The distributions, mechanisms, and structures of metabolite-binding riboswitches
    • Barrick, J. E., and R. R. Breaker. 2007. The distributions, mechanisms, and structures of metabolite-binding riboswitches. Genome Biol. 8:R239.
    • (2007) Genome Biol , vol.8
    • Barrick, J.E.1    Breaker, R.R.2
  • 6
    • 77958096962 scopus 로고    scopus 로고
    • Enterohaemorrhagic Escherichia coli gains a competitive advantage by using ethanolamine as a nitrogen source in the bovine intestinal content
    • Bertin, Y., et al. 2011. Enterohaemorrhagic Escherichia coli gains a competitive advantage by using ethanolamine as a nitrogen source in the bovine intestinal content. Environ. Microbiol. 13:365-377.
    • (2011) Environ. Microbiol. , vol.13 , pp. 365-377
    • Bertin, Y.1
  • 7
    • 0037046271 scopus 로고    scopus 로고
    • Carbon catabolite repression in bacteria: choice of the carbon source and autoregulatory limitation of sugar utilization
    • Bruckner, R., and F. Titgemeyer. 2002. Carbon catabolite repression in bacteria: choice of the carbon source and autoregulatory limitation of sugar utilization. FEMS Microbiol. Lett. 209:141-148.
    • (2002) FEMS Microbiol. Lett. , vol.209 , pp. 141-148
    • Bruckner, R.1    Titgemeyer, F.2
  • 8
    • 0032561133 scopus 로고    scopus 로고
    • NasR, a novel RNA-binding protein, mediates nitrate-responsive transcription antitermination of the Klebsiella oxytoca M5al nasF operon leader in vitro
    • Chai, W., and V. Stewart. 1998. NasR, a novel RNA-binding protein, mediates nitrate-responsive transcription antitermination of the Klebsiella oxytoca M5al nasF operon leader in vitro. J. Mol. Biol. 283:339-351.
    • (1998) J. Mol. Biol. , vol.283 , pp. 339-351
    • Chai, W.1    Stewart, V.2
  • 9
    • 0026241219 scopus 로고
    • Mechanism of formation of chloropropanols present in protein hydrolysates
    • Collier, P. D., D. D. O. Cromiue, and A. P. Davies. 1991. Mechanism of formation of chloropropanols present in protein hydrolysates. J. Am. Oil Chem. Soc. 68:785-790.
    • (1991) J. Am. Oil Chem. Soc. , vol.68 , pp. 785-790
    • Collier, P.D.1    Cromiue, D.D.O.2    Davies, A.P.3
  • 10
    • 0025149087 scopus 로고
    • High efficiency introduction of plasmid DNA into glycine treated Enterococcus faecalis by electroporation
    • Cruz-Rodz, A. L., and M. S. Gilmore. 1990. High efficiency introduction of plasmid DNA into glycine treated Enterococcus faecalis by electroporation. Mol. Gen. Genet. 224:152-154.
    • (1990) Mol. Gen. Genet. , vol.224 , pp. 152-154
    • Cruz-Rodz, A.L.1    Gilmore, M.S.2
  • 11
    • 55749109226 scopus 로고    scopus 로고
    • Ethanolamine activates a sensor histidine kinase regulating its utilization in Enterococcus faecalis
    • Del Papa, M. F., and M. Perego. 2008. Ethanolamine activates a sensor histidine kinase regulating its utilization in Enterococcus faecalis. J. Bacteriol. 190:7147-7156.
    • (2008) J. Bacteriol. , vol.190 , pp. 7147-7156
    • Del Papa, M.F.1    Perego, M.2
  • 12
    • 3242772754 scopus 로고    scopus 로고
    • The role of the intestinal tract as a reservoir and source for transmission of nosocomial pathogens
    • Donskey, C. J. 2004. The role of the intestinal tract as a reservoir and source for transmission of nosocomial pathogens. Clin. Infect. Dis. 39:219-226.
    • (2004) Clin. Infect. Dis. , vol.39 , pp. 219-226
    • Donskey, C.J.1
  • 13
    • 0022000733 scopus 로고
    • Sequence analysis of the spo0B locus reveals a polycistronic transcription unit
    • Ferrari, F. A., K. A. Trach, and J. A. Hoch. 1985. Sequence analysis of the spo0B locus reveals a polycistronic transcription unit. J. Bacteriol. 161:556-562.
    • (1985) J. Bacteriol. , vol.161 , pp. 556-562
    • Ferrari, F.A.1    Trach, K.A.2    Hoch, J.A.3
  • 14
    • 0035026466 scopus 로고    scopus 로고
    • The molecular puzzle of two-component signaling cascades
    • Foussard, M., et al. 2001. The molecular puzzle of two-component signaling cascades. Microbes Infect. 3:417-424.
    • (2001) Microbes Infect , vol.3 , pp. 417-424
    • Foussard, M.1
  • 15
    • 63149194170 scopus 로고    scopus 로고
    • Multiple posttranscriptional regulatory mechanisms partner to control ethanolamine utilization in Enterococcus faecalis
    • Fox, K. A., et al. 2009. Multiple posttranscriptional regulatory mechanisms partner to control ethanolamine utilization in Enterococcus faecalis. Proc. Natl. Acad. Sci. U. S. A. 106:4435-4440.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 4435-4440
    • Fox, K.A.1
  • 16
    • 77949547790 scopus 로고    scopus 로고
    • Ethanolamine utilization in bacterial pathogens: roles and regulation
    • Garsin, D. A. 2010. Ethanolamine utilization in bacterial pathogens: roles and regulation. Nat. Rev. Microbiol. 8:290-295.
    • (2010) Nat. Rev. Microbiol. , vol.8 , pp. 290-295
    • Garsin, D.A.1
  • 17
    • 0036837964 scopus 로고    scopus 로고
    • Two-component signal transduction in Enterococcus faecalis
    • Hancock, L. E., and M. Perego. 2002. Two-component signal transduction in Enterococcus faecalis. J. Bacteriol. 184:5819-5825.
    • (2002) J. Bacteriol. , vol.184 , pp. 5819-5825
    • Hancock, L.E.1    Perego, M.2
  • 18
    • 4344682069 scopus 로고    scopus 로고
    • The Enterococcus faecalis fsr twocomponent system controls biofilm development through production of gelatinase
    • Hancock, L. E., and M. Perego. 2004. The Enterococcus faecalis fsr twocomponent system controls biofilm development through production of gelatinase. J. Bacteriol. 186:5629-5639.
    • (2004) J. Bacteriol. , vol.186 , pp. 5629-5639
    • Hancock, L.E.1    Perego, M.2
  • 19
    • 54949148412 scopus 로고    scopus 로고
    • NHSN annual update: antimicrobial-resistant pathogens associated with healthcare-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007
    • Hidron, A. I., et al. 2008. NHSN annual update: antimicrobial-resistant pathogens associated with healthcare-associated infections: annual summary of data reported to the National Healthcare Safety Network at the Centers for Disease Control and Prevention, 2006-2007. Infect. Control Hosp. Epidemiol. 29:996-1011.
    • (2008) Infect. Control Hosp. Epidemiol. , vol.29 , pp. 996-1011
    • Hidron, A.I.1
  • 20
    • 0031861002 scopus 로고    scopus 로고
    • Multiple-drug resistant enterococci: the nature of the problem and an agenda for the future
    • Huycke, M. M., D. F. Sahm, and M. S. Gilmore. 1998. Multiple-drug resistant enterococci: the nature of the problem and an agenda for the future. Emerg. Infect. Dis. 4:239-249.
    • (1998) Emerg. Infect. Dis. , vol.4 , pp. 239-249
    • Huycke, M.M.1    Sahm, D.F.2    Gilmore, M.S.3
  • 21
    • 0036198739 scopus 로고    scopus 로고
    • Carbon catabolite repression by the catabolite control protein CcpA in Staphylococcus xylosus
    • Jankovic, I., and R. Bruckner. 2002. Carbon catabolite repression by the catabolite control protein CcpA in Staphylococcus xylosus. J. Mol. Microbiol. Biotechnol. 4:309-314.
    • (2002) J. Mol. Microbiol. Biotechnol. , vol.4 , pp. 309-314
    • Jankovic, I.1    Bruckner, R.2
  • 22
    • 0032851358 scopus 로고    scopus 로고
    • The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins
    • Kofoid, E., C. Rappleye, I. Stojiljkovic, and J. Roth. 1999. The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins. J. Bacteriol. 181:5317-5329.
    • (1999) J. Bacteriol. , vol.181 , pp. 5317-5329
    • Kofoid, E.1    Rappleye, C.2    Stojiljkovic, I.3    Roth, J.4
  • 23
    • 21844471754 scopus 로고    scopus 로고
    • Systematic association of genes to phenotypes by genome and literature mining
    • Korbel, J. O., et al. 2005. Systematic association of genes to phenotypes by genome and literature mining. PLoS. Biol. 3:e134.
    • (2005) PLoS. Biol. , vol.3
    • Korbel, J.O.1
  • 24
    • 33846993832 scopus 로고    scopus 로고
    • Development of a host-genotype-independent counterselectable marker and a high-frequency conjugative delivery system and their use in genetic analysis of Enterococcus faecalis
    • Kristich, C. J., J. R. Chandler, and G. M. Dunny. 2007. Development of a host-genotype-independent counterselectable marker and a high-frequency conjugative delivery system and their use in genetic analysis of Enterococcus faecalis. Plasmid 57:131-144.
    • (2007) Plasmid , vol.57 , pp. 131-144
    • Kristich, C.J.1    Chandler, J.R.2    Dunny, G.M.3
  • 25
    • 0038575114 scopus 로고    scopus 로고
    • Global regulation by CsrA in Salmonella typhimurium
    • Lawhon, S. D., et al. 2003. Global regulation by CsrA in Salmonella typhimurium. Mol. Microbiol. 48:1633-1645.
    • (2003) Mol. Microbiol. , vol.48 , pp. 1633-1645
    • Lawhon, S.D.1
  • 26
    • 0035444240 scopus 로고    scopus 로고
    • Prediction of rho-independent transcriptional terminators in Escherichia coli
    • Lesnik, E. A., et al. 2001. Prediction of rho-independent transcriptional terminators in Escherichia coli. Nucleic Acids Res. 29:3583-3594.
    • (2001) Nucleic Acids Res , vol.29 , pp. 3583-3594
    • Lesnik, E.A.1
  • 27
    • 0035873658 scopus 로고    scopus 로고
    • Clinical prevalence, antimicrobial susceptibility, and geographic resistance patterns of enterococci: results from the SENTRY Antimicrobial Surveillance Program, 1997-1999
    • Low, D. E., N. Keller, A. Barth, and R. N. Jones. 2001. Clinical prevalence, antimicrobial susceptibility, and geographic resistance patterns of enterococci: results from the SENTRY Antimicrobial Surveillance Program, 1997-1999. Clin. Infect. Dis. 32(Suppl. 2):S133-S145.
    • (2001) Clin. Infect. Dis. , vol.32 , Issue.SUPPL. 2
    • Low, D.E.1    Keller, N.2    Barth, A.3    Jones, R.N.4
  • 28
    • 0033591465 scopus 로고    scopus 로고
    • Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
    • Mathews, D. H., J. Sabina, M. Zuker, and D. H. Turner. 1999. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J. Mol. Biol. 288:911-940.
    • (1999) J. Mol. Biol. , vol.288 , pp. 911-940
    • Mathews, D.H.1    Sabina, J.2    Zuker, M.3    Turner, D.H.4
  • 29
    • 0003785155 scopus 로고
    • Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
    • Miller, J. H. 1972. Experiments in Molecular Genetics, p. 352-355. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
    • (1972) Experiments in Molecular Genetics , pp. 352-355
    • Miller, J.H.1
  • 30
    • 0027328958 scopus 로고
    • Generation of restriction map of Enterococcus faecalis OG1 and investigation of growth requirements and regions encoding biosynthetic function
    • Murray, B. E., et al. 1993. Generation of restriction map of Enterococcus faecalis OG1 and investigation of growth requirements and regions encoding biosynthetic function. J. Bacteriol. 175:5216-5223.
    • (1993) J. Bacteriol. , vol.175 , pp. 5216-5223
    • Murray, B.E.1
  • 31
    • 0037470983 scopus 로고    scopus 로고
    • Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis
    • Paulsen, I. T., et al. 2003. Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis. Science 299:2071-2074.
    • (2003) Science , vol.299 , pp. 2071-2074
    • Paulsen, I.T.1
  • 32
    • 0026657140 scopus 로고
    • Autogenous regulation of ethanolamine utilization by a transcriptional activator of the eut operon in Salmonella typhimurium
    • Roof, D. M., and J. R. Roth. 1992. Autogenous regulation of ethanolamine utilization by a transcriptional activator of the eut operon in Salmonella typhimurium. J. Bacteriol. 174:6634-6643.
    • (1992) J. Bacteriol. , vol.174 , pp. 6634-6643
    • Roof, D.M.1    Roth, J.R.2
  • 33
    • 0024443657 scopus 로고
    • In vitro susceptibility studies of vancomycin-resistant Enterococcus faecalis
    • Sahm, D. F., et al. 1989. In vitro susceptibility studies of vancomycin-resistant Enterococcus faecalis. Antimicrob. Agents Chemother. 33:1588-1591.
    • (1989) Antimicrob. Agents Chemother. , vol.33 , pp. 1588-1591
    • Sahm, D.F.1
  • 34
    • 0036160325 scopus 로고    scopus 로고
    • ANTAR: an RNA-binding domain in transcription antitermination regulatory proteins
    • Shu, C. J., and I. B. Zhulin. 2002. ANTAR: an RNA-binding domain in transcription antitermination regulatory proteins. Trends Biochem. Sci. 27: 3-5.
    • (2002) Trends Biochem. Sci. , vol.27 , pp. 3-5
    • Shu, C.J.1    Zhulin, I.B.2
  • 35
    • 0028944586 scopus 로고
    • Ethanolamine utilization in Salmonella typhimurium: nucleotide sequence, protein expression, and mutational analysis of the cchA cchB eutE eutJ eutG eutH gene cluster
    • Stojiljkovic, I., A. J. Baumler, and F. Heffron. 1995. Ethanolamine utilization in Salmonella typhimurium: nucleotide sequence, protein expression, and mutational analysis of the cchA cchB eutE eutJ eutG eutH gene cluster. J. Bacteriol. 177:1357-1366.
    • (1995) J. Bacteriol. , vol.177 , pp. 1357-1366
    • Stojiljkovic, I.1    Baumler, A.J.2    Heffron, F.3
  • 36
    • 33749986680 scopus 로고    scopus 로고
    • Tandem riboswitch architectures exhibit complex gene control functions
    • Sudarsan, N., et al. 2006. Tandem riboswitch architectures exhibit complex gene control functions. Science 314:300-304.
    • (2006) Science , vol.314 , pp. 300-304
    • Sudarsan, N.1
  • 37
    • 70350434311 scopus 로고    scopus 로고
    • Capsular polysaccharide production in Enterococcus faecalis and contribution of CpsF to capsule serospecificity
    • Thurlow, L. R., V. C. Thomas, and L. E. Hancock. 2009. Capsular polysaccharide production in Enterococcus faecalis and contribution of CpsF to capsule serospecificity. J. Bacteriol. 191:6203-6210.
    • (2009) J. Bacteriol. , vol.191 , pp. 6203-6210
    • Thurlow, L.R.1    Thomas, V.C.2    Hancock, L.E.3
  • 38
    • 67649268395 scopus 로고    scopus 로고
    • The Listeria transcriptional landscape from saprophytism to virulence
    • Toledo-Arana, A., et al. 2009. The Listeria transcriptional landscape from saprophytism to virulence. Nature 459:950-956.
    • (2009) Nature , vol.459 , pp. 950-956
    • Toledo-Arana, A.1
  • 39
    • 72249103848 scopus 로고    scopus 로고
    • Comparative genomics of ethanolamine utilization
    • Tsoy, O., D. Ravcheev, and A. Mushegian. 2009. Comparative genomics of ethanolamine utilization. J. Bacteriol. 191:7157-7164.
    • (2009) J. Bacteriol. , vol.191 , pp. 7157-7164
    • Tsoy, O.1    Ravcheev, D.2    Mushegian, A.3
  • 40
    • 0042834096 scopus 로고    scopus 로고
    • Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element
    • Vitreschak, A. G., D. A. Rodionov, A. A. Mironov, and M. S. Gelfand. 2003. Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element. RNA 9:1084-1097.
    • (2003) RNA , vol.9 , pp. 1084-1097
    • Vitreschak, A.G.1    Rodionov, D.A.2    Mironov, A.A.3    Gelfand, M.S.4
  • 41
    • 0029994193 scopus 로고    scopus 로고
    • Transcription antitermination regulation of the Pseudomonas aeruginosa amidase operon
    • Wilson, S. A., S. J. Wachira, R. A. Norman, L. H. Pearl, and R. E. Drew. 1996. Transcription antitermination regulation of the Pseudomonas aeruginosa amidase operon. EMBO J. 15:5907-5916.
    • (1996) EMBO J , vol.15 , pp. 5907-5916
    • Wilson, S.A.1    Wachira, S.J.2    Norman, R.A.3    Pearl, L.H.4    Drew, R.E.5
  • 42
    • 27144527479 scopus 로고    scopus 로고
    • Regulation of bacterial gene expression by riboswitches
    • Winkler, W. C., and R. R. Breaker. 2005. Regulation of bacterial gene expression by riboswitches. Annu. Rev. Microbiol. 59:487-517.
    • (2005) Annu. Rev. Microbiol. , vol.59 , pp. 487-517
    • Winkler, W.C.1    Breaker, R.R.2
  • 43
    • 3943093972 scopus 로고    scopus 로고
    • Nosocomial bloodstream infections in US hospitals: analysis of 24,179 cases from a prospective nationwide surveillance study
    • Wisplinghoff, H., et al. 2004. Nosocomial bloodstream infections in US hospitals: analysis of 24,179 cases from a prospective nationwide surveillance study. Clin. Infect. Dis. 39:309-317.
    • (2004) Clin. Infect. Dis. , vol.39 , pp. 309-317
    • Wisplinghoff, H.1
  • 44
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: nucleotide sequence of the m13mp18 and pUC10 vectors
    • Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequence of the m13mp18 and pUC10 vectors. Gene 33:103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 45
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31:3406-3415.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.