메뉴 건너뛰기




Volumn 87, Issue 2, 2012, Pages 137-143

Application of real-time PCR-based SNP detection for mapping of Net2, a causal D-genome gene for hybrid necrosis in interspecific crosses between tetraploidwheat and Aegilops tauschii

Author keywords

Allopolyploidization; Chromosomal synteny; High resolution melting analysis; Single nucleotide polymorphism; Synthetic hexaploid wheat

Indexed keywords

COMPLEMENTARY DNA;

EID: 84864041424     PISSN: 13417568     EISSN: 18805779     Source Type: Journal    
DOI: 10.1266/ggs.87.137     Document Type: Article
Times cited : (15)

References (35)
  • 3
    • 80755143074 scopus 로고    scopus 로고
    • High resolution melting analysis for the detection of EMS induced mutations in wheat SbeIIagenes
    • Botticella, E., Sestili, F., Hernandez-Lopez, A., Philips, A., and Lafiandra, D. (2011) High resolution melting analysis for the detection of EMS induced mutations in wheat SbeIIagenes. BMC Plant Biol. 11, 156.
    • (2011) BMC Plant Biol. , vol.11 , pp. 156
    • Botticella, E.1    Sestili, F.2    Hernandez-Lopez, A.3    Philips, A.4    Lafiandra, D.5
  • 6
    • 73449109860 scopus 로고    scopus 로고
    • Simultaneous mutation detection of three homoeologous genes in wheat by High Resolution Melting analysis and Mutation Surveyor
    • Dong, C., Vincent, K., and Sharp, S. (2009) Simultaneous mutation detection of three homoeologous genes in wheat by High Resolution Melting analysis and Mutation Surveyor. BMC Plant Biol. 9, 143.
    • (2009) BMC Plant Biol. , vol.9 , pp. 143
    • Dong, C.1    Vincent, K.2    Sharp, S.3
  • 7
    • 34347386048 scopus 로고    scopus 로고
    • PCR-based landmark unique gene (PLUG) markers effectively assign homoeologous wheat genes to A, B and D genomes
    • Ishikawa, G., Yonemaru, J., Saito, M., and Nakamura, T. (2007) PCR-based landmark unique gene (PLUG) markers effectively assign homoeologous wheat genes to A, B and D genomes. BMC Genomics 8, 135.
    • (2007) BMC Genomics , vol.8 , pp. 135
    • Ishikawa, G.1    Yonemaru, J.2    Saito, M.3    Nakamura, T.4
  • 8
    • 79959669453 scopus 로고    scopus 로고
    • Distinct genetic regulation of flowering time and grain-filling period based on empirical study of D-genome diversity in synthetic hexaploid wheat lines
    • Kajimura, T., Murai, K., and Takumi, S. (2011) Distinct genetic regulation of flowering time and grain-filling period based on empirical study of D-genome diversity in synthetic hexaploid wheat lines. Breed. Sci. 61, 130-141.
    • (2011) Breed. Sci. , vol.61 , pp. 130-141
    • Kajimura, T.1    Murai, K.2    Takumi, S.3
  • 9
    • 0000732266 scopus 로고
    • The estimation of map distance from recombination values
    • Kosambi, D. D. (1944) The estimation of map distance from recombination values. Ann. Eugen. 12, 172-175.
    • (1944) Ann. Eugen. , vol.12 , pp. 172-175
    • Kosambi, D.D.1
  • 10
    • 84860651881 scopus 로고    scopus 로고
    • Characterization of three VERNALIZATION INSENSITIVE3-like (VIL) homologs in wild wheat, Aegilops tauschii Coss
    • in press
    • Koyama, K., Hatano, H., Nakamura, J., and Takumi, S. (2012) Characterization of three VERNALIZATION INSENSITIVE3-like (VIL) homologs in wild wheat, Aegilops tauschii Coss. Hereditas 149, in press.
    • (2012) Hereditas , vol.149
    • Koyama, K.1    Hatano, H.2    Nakamura, J.3    Takumi, S.4
  • 11
    • 0023426747 scopus 로고
    • MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations
    • Lander, E. S., Green, P., and Abrahamson, J. (1987) MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1, 174-181.
    • (1987) Genomics , vol.1 , pp. 174-181
    • Lander, E.S.1    Green, P.2    Abrahamson, J.3
  • 13
    • 79956129888 scopus 로고    scopus 로고
    • Evolution of polyploid Triticum wheats under cultivation: The role of domestication, natural hybridization and allopolyploid speciation in their diversification
    • Matsuoka, Y. (2011) Evolution of polyploid Triticum wheats under cultivation: the role of domestication, natural hybridization and allopolyploid speciation in their diversification. Plant Cell Physiol. 52, 750-764.
    • (2011) Plant Cell Physiol. , vol.52 , pp. 750-764
    • Matsuoka, Y.1
  • 14
    • 11144300317 scopus 로고    scopus 로고
    • Durum wheat as a candidate for the unknown female progenitor of bread wheat: An empirical study with a highly fertile F1 hybrid with Aegilops tauschii Coss
    • Matsuoka, Y., and Nasuda, S. (2004) Durum wheat as a candidate for the unknown female progenitor of bread wheat: an empirical study with a highly fertile F1 hybrid with Aegilops tauschii Coss. Theor. Appl. Genet. 109, 1710-1717.
    • (2004) Theor. Appl. Genet. , vol.109 , pp. 1710-1717
    • Matsuoka, Y.1    Nasuda, S.2
  • 15
    • 34547733575 scopus 로고    scopus 로고
    • Natural variation for fertile triploid F1 hybrid formation in allohexaploid wheat speciation
    • Matsuoka, Y., Takumi, S., and Kawahara, T. (2007) Natural variation for fertile triploid F1 hybrid formation in allohexaploid wheat speciation. Theor. Appl. Genet. 115, 509-518.
    • (2007) Theor. Appl. Genet. , vol.115 , pp. 509-518
    • Matsuoka, Y.1    Takumi, S.2    Kawahara, T.3
  • 16
    • 52349115706 scopus 로고    scopus 로고
    • Flowering time diversification and dispersal in central Eurasian wild wheat Aegilops tauschii Coss.: Genealogical and ecological framework
    • Matsuoka, Y., Takumi, S., and Kawahara, T. (2008) Flowering time diversification and dispersal in central Eurasian wild wheat Aegilops tauschii Coss.: genealogical and ecological framework. PLoS ONE 3, e3138.
    • (2008) PLoS ONE , vol.3
    • Matsuoka, Y.1    Takumi, S.2    Kawahara, T.3
  • 17
    • 79957676864 scopus 로고    scopus 로고
    • Unlocking the barley genome by chromosomal and comparative genomics
    • Mayer, K. F. X., Martis, M., Hedley, P. E., Simková, H., et al. (2011) Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell 23, 1249-1263.
    • (2011) Plant Cell , vol.23 , pp. 1249-1263
    • Mayer, K.F.X.1    Martis, M.2    Hedley, P.E.3    Simková, H.4
  • 18
    • 77956199715 scopus 로고    scopus 로고
    • Hypersensitive response-like reaction is associated with hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii Coss
    • Mizuno, N., Hosogi, N., Park, P., and Takumi, S. (2010a) Hypersensitive response-like reaction is associated with hybrid necrosis in interspecific crosses between tetraploid wheat and Aegilops tauschii Coss. PLoS ONE 5, e11326.
    • (2010) PLoS ONE , vol.5
    • Mizuno, N.1    Hosogi, N.2    Park, P.3    Takumi, S.4
  • 19
    • 77953646841 scopus 로고    scopus 로고
    • Population structure of wild wheat D-genome progenitor Aegilops tauschii Coss.: Implications for intraspecific lineage diversification and evolution of common wheat
    • Mizuno, N., Yamasaki, M., Matsuoka, Y., Kawahara, T., and Takumi, S. (2010b) Population structure of wild wheat D-genome progenitor Aegilops tauschii Coss.: implications for intraspecific lineage diversification and evolution of common wheat. Mol. Ecol. 19, 999-1013.
    • (2010) Mol. Ecol. , vol.19 , pp. 999-1013
    • Mizuno, N.1    Yamasaki, M.2    Matsuoka, Y.3    Kawahara, T.4    Takumi, S.5
  • 20
    • 80053562293 scopus 로고    scopus 로고
    • Autoimmune response and repression of mitotic cell division occur in inter-specific crosses between tetraploid wheat and Aegilops tauschii Coss. that show low temperature-induced hybrid necrosis
    • Mizuno, N., Shitsukawa, N., Hosogi, N., Park, P., and Takumi, S. (2011) Autoimmune response and repression of mitotic cell division occur in inter-specific crosses between tetraploid wheat and Aegilops tauschii Coss. that show low temperature-induced hybrid necrosis. Plant J. 68, 114-128.
    • (2011) Plant J. , vol.68 , pp. 114-128
    • Mizuno, N.1    Shitsukawa, N.2    Hosogi, N.3    Park, P.4    Takumi, S.5
  • 21
    • 33747610716 scopus 로고    scopus 로고
    • Tissue expression map of a large number of expressed sequence tags and its application to in silico screening of stress response genes in common wheat
    • Mochida, K., Kawaura, K., Shimosaka, E., Kawakami, N., Shin-I, T., Kohara, Y., Yamazaki, Y., and Ogihara, Y. (2006) Tissue expression map of a large number of expressed sequence tags and its application to in silico screening of stress response genes in common wheat. Mol. Genet. Genomics 276, 304-312.
    • (2006) Mol. Genet. Genomics , vol.276 , pp. 304-312
    • Mochida, K.1    Kawaura, K.2    Shimosaka, E.3    Kawakami, N.4    Shin, I.T.5    Kohara, Y.6    Yamazaki, Y.7    Ogihara, Y.8
  • 22
    • 67650100882 scopus 로고    scopus 로고
    • TriFLDB: A database of clustered full-length coding sequences from Triticeae with applications to comparative grass genomics
    • Mochida, K., Yoshida, T., Sakurai, T., Ogihara, Y., and Shinozaki, K. (2009) TriFLDB: a database of clustered full-length coding sequences from Triticeae with applications to comparative grass genomics. Plant Physiol. 150, 1135-1146.
    • (2009) Plant Physiol. , vol.150 , pp. 1135-1146
    • Mochida, K.1    Yoshida, T.2    Sakurai, T.3    Ogihara, Y.4    Shinozaki, K.5
  • 24
    • 84996368031 scopus 로고
    • Hybrid lethality in crosses between Emmer wheats and Aegilops squarrosa, II. Synthesized 6x wheats employed as test varieties
    • Nishikawa, K. (1960) Hybrid lethality in crosses between Emmer wheats and Aegilops squarrosa, II. Synthesized 6x wheats employed as test varieties. Jpn. J. Genet. 37, 227-236.
    • (1960) Jpn. J. Genet. , vol.37 , pp. 227-236
    • Nishikawa, K.1
  • 25
    • 77955091912 scopus 로고
    • Hybrid lethality in crosses between Emmer wheats and Aegilops squarrosa, III. Gene analysis of type-2 necrosis
    • Nishikawa, K. (1962) Hybrid lethality in crosses between Emmer wheats and Aegilops squarrosa, III. Gene analysis of type-2 necrosis. Seiken Ziho 14, 45-50.
    • (1962) Seiken Ziho , vol.14 , pp. 45-50
    • Nishikawa, K.1
  • 27
    • 68349151220 scopus 로고    scopus 로고
    • A high-density transcript linkage map of barley derived from a single population
    • Sato, K., Nankaku, N., and Takeda, K. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103, 110-117.
    • (2009) Heredity , vol.103 , pp. 110-117
    • Sato, K.1    Nankaku, N.2    Takeda, K.3
  • 28
    • 8744230085 scopus 로고    scopus 로고
    • A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.)
    • Somers, D. J., Isaac, P., and Edwards, K. (2004) A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.). Theor. Appl. Genet. 109, 1105-1114.
    • (2004) Theor. Appl. Genet. , vol.109 , pp. 1105-1114
    • Somers, D.J.1    Isaac, P.2    Edwards, K.3
  • 30
    • 67649637062 scopus 로고    scopus 로고
    • Expression of morphological and flowering time variation through allopolyploidization: An empirical study with 27 wheat synthetics and their parental Aegilops tauschii accessions
    • Takumi, S., Naka, Y., Morihiro, H., and Matsuoka, Y. (2009a) Expression of morphological and flowering time variation through allopolyploidization: an empirical study with 27 wheat synthetics and their parental Aegilops tauschii accessions. Plant Breed. 128, 585-590.
    • (2009) Plant Breed. , vol.128 , pp. 585-590
    • Takumi, S.1    Naka, Y.2    Morihiro, H.3    Matsuoka, Y.4
  • 31
    • 72549119903 scopus 로고    scopus 로고
    • Natural variation of morphological traits in wild wheat progenitor Aegilops tauschii
    • Takumi, S., Nishioka, E., Morihiro, H., Kawahara, T., and Matsuoka, Y. (2009b) Natural variation of morphological traits in wild wheat progenitor Aegilops tauschii Coss. Breed. Sci. 59, 579-588.
    • (2009) Coss. Breed. Sci. , vol.59 , pp. 579-588
    • Takumi, S.1    Nishioka, E.2    Morihiro, H.3    Kawahara, T.4    Matsuoka, Y.5
  • 32
    • 33645413218 scopus 로고    scopus 로고
    • SSR-based linkage map with new markers using an intraspecific population of common wheat
    • Torada, A., Koike, M., Mochida, K., and Ogihara, Y. (2006) SSR-based linkage map with new markers using an intraspecific population of common wheat. Theor. Appl. Genet. 112, 1042-1051.
    • (2006) Theor. Appl. Genet. , vol.112 , pp. 1042-1051
    • Torada, A.1    Koike, M.2    Mochida, K.3    Ogihara, Y.4
  • 34
    • 0038359432 scopus 로고    scopus 로고
    • High-resolution genotyping by amplicon melting analysis using LCGreen
    • Wittwer, C. T., Reed, G. H., Gindry, C. N., Vandersteen, J. G., and Pryor, R. J. (2003) High-resolution genotyping by amplicon melting analysis using LCGreen. Clin. Chem. 49, 853-860.
    • (2003) Clin. Chem. , vol.49 , pp. 853-860
    • Wittwer, C.T.1    Reed, G.H.2    Gindry, C.N.3    Vandersteen, J.G.4    Pryor, R.J.5
  • 35
    • 78951478131 scopus 로고    scopus 로고
    • Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without reference genome sequence
    • You, F. M., Huo, N., Deal, K. R., Gu, Y. Q., Luo, M.-C., McGuire, P. E., Dvorak, J., and Anderson, O. D. (2011) Annotation-based genome-wide SNP discovery in the large and complex Aegilops tauschii genome using next-generation sequencing without reference genome sequence. BMC Genomics 12, 59.
    • (2011) BMC Genomics , vol.12 , pp. 59
    • You, F.M.1    Huo, N.2    Deal, K.R.3    Gu, Y.Q.4    Luo, M.-C.5    McGuire, P.E.6    Dvorak, J.7    Anderson, O.D.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.