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Volumn 72, Issue 14, 2012, Pages 3499-3511

CellMiner: A web-based suite of genomic and pharmacologic tools to explore transcript and drug patterns in the NCI-60 cell line set

Author keywords

[No Author keywords available]

Indexed keywords

AFATINIB; CHROMOMYCIN; DOXORUBICIN; ERLOTINIB; GEFITINIB; LAPATINIB; MICRORNA; MICRORNA 17 92; ROMIDEPSIN; UNCLASSIFIED DRUG;

EID: 84863910171     PISSN: 00085472     EISSN: 15387445     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-12-1370     Document Type: Article
Times cited : (672)

References (46)
  • 1
    • 77952117909 scopus 로고    scopus 로고
    • Analysis of Food and Drug Administration-approved anticancer agents in the NCI60 panel of human tumor cell lines
    • Holbeck SL, Collins JM, Doroshow JH. Analysis of Food and Drug Administration-approved anticancer agents in the NCI60 panel of human tumor cell lines. Mol Cancer Ther 2010;9:1451-60.
    • (2010) Mol Cancer Ther , vol.9 , pp. 1451-1460
    • Holbeck, S.L.1    Collins, J.M.2    Doroshow, J.H.3
  • 2
    • 33749011163 scopus 로고    scopus 로고
    • The NCI60 human tumour cell line anticancer drug screen
    • DOI 10.1038/nrc1951, PII NRC1951
    • Shoemaker R. The NCI60 human tumour cell line anticancer drug screen. Nat Rev Cancer 2006;6:813-23. (Pubitemid 44450469)
    • (2006) Nature Reviews Cancer , vol.6 , Issue.10 , pp. 813-823
    • Shoemaker, R.H.1
  • 12
    • 67651176020 scopus 로고    scopus 로고
    • Topoisomerase I levels in the NCI-60 cancer cell line panel determined by validated ELISA and microarray analysis and correlation with indenoisoquinoline sensitivity
    • Pfister TD, Reinhold WC, Agama K, Gupta S, Khin SA, Kinders RJ, et al. Topoisomerase I levels in the NCI-60 cancer cell line panel determined by validated ELISA and microarray analysis and correlation with indenoisoquinoline sensitivity. Mol Cancer Ther 2009;8:1878-84.
    • (2009) Mol Cancer Ther , vol.8 , pp. 1878-1884
    • Pfister, T.D.1    Reinhold, W.C.2    Agama, K.3    Gupta, S.4    Khin, S.A.5    Kinders, R.J.6
  • 13
    • 77950287156 scopus 로고    scopus 로고
    • Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron
    • Reinhold WC, Mergny JL, Liu H, Ryan M, Pfister TD, Kinders R, et al. Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron. Cancer Res 2010;70:2191-203.
    • (2010) Cancer Res , vol.70 , pp. 2191-2203
    • Reinhold, W.C.1    Mergny, J.L.2    Liu, H.3    Ryan, M.4    Pfister, T.D.5    Kinders, R.6
  • 14
    • 78650448417 scopus 로고    scopus 로고
    • Genome-wide mRNA and microRNA profiling of the NCI 60 cell-line screen and comparison of FdUMP[10] with fluorouracil, floxuridine, and topoisomerase 1 poisons
    • Gmeiner WH, Reinhold WC, Pommier Y. Genome-wide mRNA and microRNA profiling of the NCI 60 cell-line screen and comparison of FdUMP[10] with fluorouracil, floxuridine, and topoisomerase 1 poisons. Mol Cancer Ther 2010;9:3105-14.
    • (2010) Mol Cancer Ther , vol.9 , pp. 3105-3114
    • Gmeiner, W.H.1    Reinhold, W.C.2    Pommier, Y.3
  • 15
    • 80055094601 scopus 로고    scopus 로고
    • Coordinated regulation of mitochondrial topoisomerase IB with mitochondrial nuclear encoded genes and MYC
    • Zoppoli G, Douarre C, Dalla Rosa I, Liu H, Reinhold W, Pommier Y. Coordinated regulation of mitochondrial topoisomerase IB with mitochondrial nuclear encoded genes and MYC. Nucleic Acids Res 2011;39:6620-32.
    • (2011) Nucleic Acids Res , vol.39 , pp. 6620-6632
    • Zoppoli, G.1    Douarre, C.2    Dalla Rosa, I.3    Liu, H.4    Reinhold, W.5    Pommier, Y.6
  • 16
    • 84856226487 scopus 로고    scopus 로고
    • CHEK2 genomic and proteomic analyses reveal genetic inactivation or endogenous activation across the 60 cell lines of the US National Cancer Institute
    • Zoppoli G, Solier S, Reinhold WC, Liu H, Connelly JW Jr, Monks A, et al. CHEK2 genomic and proteomic analyses reveal genetic inactivation or endogenous activation across the 60 cell lines of the US National Cancer Institute. Oncogene 2012;31:403-18.
    • (2012) Oncogene , vol.31 , pp. 403-418
    • Zoppoli, G.1    Solier, S.2    Reinhold, W.C.3    Liu, H.4    Connelly Jr., J.W.5    Monks, A.6
  • 17
    • 80053905112 scopus 로고    scopus 로고
    • Identification of a predominant co-regulation among kinetochore genes, prospective regulatory elements, and association with genomic instability
    • Reinhold WC, Erliandri I, Liu H, Zoppoli G, Pommier Y, Larionov V. Identification of a predominant co-regulation among kinetochore genes, prospective regulatory elements, and association with genomic instability. PLoS One 2011;6:e25991.
    • (2011) PLoS One , vol.6
    • Reinhold, W.C.1    Erliandri, I.2    Liu, H.3    Zoppoli, G.4    Pommier, Y.5    Larionov, V.6
  • 18
    • 84856204554 scopus 로고    scopus 로고
    • Functional categories associated with clusters of genes that are co-expressed across the NCI-60 cancer cell lines
    • Zeeberg BR, Reinhold W, Snajder R, Thallinger GG, Weinstein JN, Kohn KW, et al. Functional categories associated with clusters of genes that are co-expressed across the NCI-60 cancer cell lines. PLoS One 2012;7:e30317.
    • (2012) PLoS One , vol.7
    • Zeeberg, B.R.1    Reinhold, W.2    Snajder, R.3    Thallinger, G.G.4    Weinstein, J.N.5    Kohn, K.W.6
  • 20
    • 23844551199 scopus 로고    scopus 로고
    • Stochastic models inspired by hybridization theory for short oligonucleotide arrays
    • DOI 10.1089/cmb.2005.12.882
    • Wu Z, Irizarry RA. Stochastic models inspired by hybridization theory for short oligonucleotide arrays. J Comput Biol 2005;12:882-93. (Pubitemid 41170488)
    • (2005) Journal of Computational Biology , vol.12 , Issue.6 , pp. 882-893
    • Wu, Z.1    Irizarry, R.A.2
  • 26
    • 84860504667 scopus 로고    scopus 로고
    • Gene expression profiles of the NCI-60 human tumor cell lines define molecular interaction networks governing cell-matrix attachments in migrating cells
    • Kohn KW, Zeeberg BR, Reinhold WC, Sunshine M, Luna A, Pommier Y. Gene expression profiles of the NCI-60 human tumor cell lines define molecular interaction networks governing cell-matrix attachments in migrating cells. PLoS One 2012;7:e35716.
    • (2012) PLoS One , vol.7
    • Kohn, K.W.1    Zeeberg, B.R.2    Reinhold, W.C.3    Sunshine, M.4    Luna, A.5    Pommier, Y.6
  • 28
    • 77953743748 scopus 로고    scopus 로고
    • ZEB1 represses E-cadherin and induces an EMT by recruiting the SWI/SNF chromatin-remodeling protein BRG1
    • Sanchez-Tillo E, Lazaro A, Torrent R, Cuatrecasas M, Vaquero EC, Castells A, et al. ZEB1 represses E-cadherin and induces an EMT by recruiting the SWI/SNF chromatin-remodeling protein BRG1. Oncogene 2010;29:3490-500.
    • (2010) Oncogene , vol.29 , pp. 3490-3500
    • Sanchez-Tillo, E.1    Lazaro, A.2    Torrent, R.3    Cuatrecasas, M.4    Vaquero, E.C.5    Castells, A.6
  • 29
    • 78649987980 scopus 로고    scopus 로고
    • Repression of E-cadherin by SNAIL, ZEB1, and TWIST in invasive ductal carcinomas of the breast: A cooperative effort?
    • Montserrat N, Gallardo A, Escuin D, Catasus L, Prat J, Gutierrez-Avigno FJ, et al. Repression of E-cadherin by SNAIL, ZEB1, and TWIST in invasive ductal carcinomas of the breast: a cooperative effort? Hum Pathol 2011;42:103-10.
    • (2011) Hum Pathol , vol.42 , pp. 103-110
    • Montserrat, N.1    Gallardo, A.2    Escuin, D.3    Catasus, L.4    Prat, J.5    Gutierrez-Avigno, F.J.6
  • 31
    • 0037326569 scopus 로고    scopus 로고
    • The transcription factor Slug represses E-cadherin expression and induces epithelial to mesenchymal transitions: A comparison with Snail and E47 repressors
    • DOI 10.1242/jcs.00224
    • Bolos V, Peinado H, Perez-Moreno M, Fraga M, Esteller M, Cano A. The transcription factor Slug represses E-cadherin expression and induces epithelial to mesenchymal transitions: a comparison with Snail and E47 repressors. J Cell Sci 2003;116:499-511. (Pubitemid 36231290)
    • (2003) Journal of Cell Science , vol.116 , Issue.3 , pp. 499-511
    • Bolos, V.1    Peinado, H.2    Perez-Moreno, M.A.3    Fraga, M.F.4    Esteller, M.5    Cano, A.6
  • 32
    • 84862909357 scopus 로고    scopus 로고
    • MiR-200 family regulates TGF-{beta}1-induced renal tubular epithelial to mesenchymal transition through Smad pathway by targeting ZEB1 and ZEB2 expression
    • Xiong M, Jiang L, Zhou Y, Qiu W, Fang L, Tan R, et al. MiR-200 family regulates TGF-{beta}1-induced renal tubular epithelial to mesenchymal transition through Smad pathway by targeting ZEB1 and ZEB2 expression. Am J Physiol Renal Physiol 2012;302:F369-79.
    • (2012) Am J Physiol Renal Physiol , vol.302
    • Xiong, M.1    Jiang, L.2    Zhou, Y.3    Qiu, W.4    Fang, L.5    Tan, R.6
  • 33
    • 77951248184 scopus 로고    scopus 로고
    • E-cadherin transcriptional down-regulation by epigenetic and microRNA-200 family alterations is related to mesenchymal and drug-resistant phenotypes in human breast cancer cells
    • Tryndyak VP, Beland FA, Pogribny IP. E-cadherin transcriptional down-regulation by epigenetic and microRNA-200 family alterations is related to mesenchymal and drug-resistant phenotypes in human breast cancer cells. Int J Cancer 2010;126:2575-83.
    • (2010) Int J Cancer , vol.126 , pp. 2575-2583
    • Tryndyak, V.P.1    Beland, F.A.2    Pogribny, I.P.3
  • 34
    • 84857079737 scopus 로고    scopus 로고
    • The microcosmos of cancer
    • Lujambio A, Lowe SW. The microcosmos of cancer. Nature 2012;482:347-55.
    • (2012) Nature , vol.482 , pp. 347-355
    • Lujambio, A.1    Lowe, S.W.2
  • 35
    • 73549124785 scopus 로고    scopus 로고
    • Tumorigenicity of the miR-17-92 cluster distilled
    • van Haaften G, Agami R. Tumorigenicity of the miR-17-92 cluster distilled. Genes Dev 2010;24:1-4.
    • (2010) Genes Dev , vol.24 , pp. 1-4
    • Van Haaften, G.1    Agami, R.2
  • 37
    • 0020058690 scopus 로고
    • Induced resistance in leukaemia L1210 to adriamycin and its cross-resistance to vincristine and bouvardin
    • Chitnis MP, Joshi SS, Gude RP, Menon RS. Induced resistance in leukaemia L1210 to adriamycin and its cross-resistance to vincristine and bouvardin. Chemotherapy 1982;28:209-12. (Pubitemid 12127452)
    • (1982) Chemotherapy , vol.28 , Issue.3 , pp. 209-212
    • Chitnis, M.P.1    Joshi, S.S.2    Gude, R.P.3    Menon, R.S.4
  • 40
    • 84856241159 scopus 로고    scopus 로고
    • Invasion front-specific expression and prognostic significance of microRNA in colorectal liver metastases
    • Kahlert C, Klupp F, Brand K, Lasitschka F, Diederichs S, Kirchberg J, et al. Invasion front-specific expression and prognostic significance of microRNA in colorectal liver metastases. Cancer Sci 2011;102:1799-807.
    • (2011) Cancer Sci , vol.102 , pp. 1799-1807
    • Kahlert, C.1    Klupp, F.2    Brand, K.3    Lasitschka, F.4    Diederichs, S.5    Kirchberg, J.6
  • 43
    • 78751480476 scopus 로고    scopus 로고
    • MEK1/2 inhibitors AS703026 and AZD6244 may be potential therapies for KRAS mutated colorectal cancer that is resistant to EGFR monoclonal antibody therapy
    • Yoon J, Koo KH, Choi KY. MEK1/2 inhibitors AS703026 and AZD6244 may be potential therapies for KRAS mutated colorectal cancer that is resistant to EGFR monoclonal antibody therapy. Cancer Res 2011;71:445-53.
    • (2011) Cancer Res , vol.71 , pp. 445-453
    • Yoon, J.1    Koo, K.H.2    Choi, K.Y.3
  • 44
    • 84863355087 scopus 로고    scopus 로고
    • Phase I study of sunitinib plus modified FOLFOX6 in Japanese patients with treatment-naive colorectal cancer
    • Yoshino T, Yamazaki K, Hamaguchi T, Shimada Y, Kato K, Yasui H, et al. Phase I study of sunitinib plus modified FOLFOX6 in Japanese patients with treatment-naive colorectal cancer. Anticancer Res 2012;32:973-9.
    • (2012) Anticancer Res , vol.32 , pp. 973-979
    • Yoshino, T.1    Yamazaki, K.2    Hamaguchi, T.3    Shimada, Y.4    Kato, K.5    Yasui, H.6
  • 46
    • 33746347333 scopus 로고    scopus 로고
    • Tyrphostins and other tyrosine kinase inhibitors
    • DOI 10.1146/annurev.biochem.75.103004.142657
    • Levitzki A, Mishani E. Tyrphostins and other tyrosine kinase inhibitors. Annu Rev Biochem 2006;75:93-109. (Pubitemid 44118027)
    • (2006) Annual Review of Biochemistry , vol.75 , pp. 93-109
    • Levitzki, A.1    Mishani, E.2


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