-
1
-
-
77954830442
-
Expression profiling of nuclear receptors in the NCI60 cancer cell panel reveals receptor-drug and receptor-gene interactions
-
Holbeck S, Chang J, Best AM, Bookout AL, Mangelsdorf DJ, et al. (2010) Expression profiling of nuclear receptors in the NCI60 cancer cell panel reveals receptor-drug and receptor-gene interactions. Mol Endocrinol 24: 1287-1296.
-
(2010)
Mol Endocrinol
, vol.24
, pp. 1287-1296
-
-
Holbeck, S.1
Chang, J.2
Best, A.M.3
Bookout, A.L.4
Mangelsdorf, D.J.5
-
2
-
-
33749011163
-
The NCI60 human tumour cell line anticancer drug screen
-
Shoemaker RH, (2006) The NCI60 human tumour cell line anticancer drug screen. Nat Rev Cancer 6: 813-823.
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 813-823
-
-
Shoemaker, R.H.1
-
3
-
-
77952202405
-
mRNA and microRNA expression profiles of the NCI-60 integrated with drug activities
-
Liu H, D'Andrade P, Fulmer-Smentek S, Lorenzi P, Kohn KW, et al. (2010) mRNA and microRNA expression profiles of the NCI-60 integrated with drug activities. Mol Cancer Ther 9: 1080-1091.
-
(2010)
Mol Cancer Ther
, vol.9
, pp. 1080-1091
-
-
Liu, H.1
D'Andrade, P.2
Fulmer-Smentek, S.3
Lorenzi, P.4
Kohn, K.W.5
-
4
-
-
0034088857
-
A gene expression database for the molecular pharmacology of cancer
-
Scherf U, Ross DT, Waltham M, Smith LH, Lee JK, et al. (2000) A gene expression database for the molecular pharmacology of cancer. Nat Genet 24: 236-244.
-
(2000)
Nat Genet
, vol.24
, pp. 236-244
-
-
Scherf, U.1
Ross, D.T.2
Waltham, M.3
Smith, L.H.4
Lee, J.K.5
-
5
-
-
34147115178
-
Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study
-
Shankavaram UT, Reinhold WC, Nishizuka S, Major S, Morita D, et al. (2007) Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study. Mol Cancer Ther 6: 820-832.
-
(2007)
Mol Cancer Ther
, vol.6
, pp. 820-832
-
-
Shankavaram, U.T.1
Reinhold, W.C.2
Nishizuka, S.3
Major, S.4
Morita, D.5
-
6
-
-
0031035181
-
An information-intensive approach to the molecular pharmacology of cancer
-
Weinstein JN, Myers TG, O'Connor PM, Friend SH, Fornace AJ Jr, et al. (1997) An information-intensive approach to the molecular pharmacology of cancer. Science 275: 343-349.
-
(1997)
Science
, vol.275
, pp. 343-349
-
-
Weinstein, J.N.1
Myers, T.G.2
O'Connor, P.M.3
Friend, S.H.4
Fornace Jr., A.J.5
-
7
-
-
0038175144
-
GoMiner: a resource for biological interpretation of genomic and proteomic data
-
Zeeberg BR, Feng W, Wang G, Wang MD, Fojo AT, et al. (2003) GoMiner: a resource for biological interpretation of genomic and proteomic data. Genome Biol 4: R28.
-
(2003)
Genome Biol
, vol.4
-
-
Zeeberg, B.R.1
Feng, W.2
Wang, G.3
Wang, M.D.4
Fojo, A.T.5
-
8
-
-
23044478689
-
High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)
-
Zeeberg BR, Qin H, Narasimhan S, Sunshine M, Cao H, et al. (2005) High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID). BMC Bioinformatics 6: 168.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 168
-
-
Zeeberg, B.R.1
Qin, H.2
Narasimhan, S.3
Sunshine, M.4
Cao, H.5
-
9
-
-
33644875286
-
The Gene Ontology (GO) project in 2006
-
(2006) The Gene Ontology (GO) project in 2006. Nucleic Acids Res 34: D322-326.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
-
10
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
-
11
-
-
21844478747
-
Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma
-
Garraway LA, Widlund HR, Rubin MA, Getz G, Berger AJ, et al. (2005) Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma. Nature 436: 117-122.
-
(2005)
Nature
, vol.436
, pp. 117-122
-
-
Garraway, L.A.1
Widlund, H.R.2
Rubin, M.A.3
Getz, G.4
Berger, A.J.5
-
12
-
-
58049198442
-
Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles
-
Prieto C, Risueno A, Fontanillo C, De las Rivas J, (2008) Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles. PLoS One 3: e3911.
-
(2008)
PLoS One
, vol.3
-
-
Prieto, C.1
Risueno, A.2
Fontanillo, C.3
de las Rivas, J.4
-
13
-
-
28944444652
-
Differential coexpression analysis using microarray data and its application to human cancer
-
Choi JK, Yu U, Yoo OJ, Kim S, (2005) Differential coexpression analysis using microarray data and its application to human cancer. Bioinformatics 21: 4348-4355.
-
(2005)
Bioinformatics
, vol.21
, pp. 4348-4355
-
-
Choi, J.K.1
Yu, U.2
Yoo, O.J.3
Kim, S.4
-
14
-
-
34548707940
-
AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets
-
Liu H, Zeeberg BR, Qu G, Koru AG, Ferrucci A, et al. (2007) AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets. Bioinformatics 23: 2385-2390.
-
(2007)
Bioinformatics
, vol.23
, pp. 2385-2390
-
-
Liu, H.1
Zeeberg, B.R.2
Qu, G.3
Koru, A.G.4
Ferrucci, A.5
-
15
-
-
48549091806
-
SpliceCenter: a suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies
-
Ryan MC, Zeeberg BR, Caplen NJ, Cleland JA, Kahn AB, et al. (2008) SpliceCenter: a suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies. BMC Bioinformatics 9: 313.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 313
-
-
Ryan, M.C.1
Zeeberg, B.R.2
Caplen, N.J.3
Cleland, J.A.4
Kahn, A.B.5
-
16
-
-
65549155929
-
Identifying set-wise differential co-expression in gene expression microarray data
-
Cho SB, Kim J, Kim JH, (2009) Identifying set-wise differential co-expression in gene expression microarray data. BMC Bioinformatics 10: 109.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 109
-
-
Cho, S.B.1
Kim, J.2
Kim, J.H.3
-
17
-
-
10244219943
-
A statistical method for identifying differential gene-gene co-expression patterns
-
Lai Y, Wu B, Chen L, Zhao H, (2004) A statistical method for identifying differential gene-gene co-expression patterns. Bioinformatics 20: 3146-3155.
-
(2004)
Bioinformatics
, vol.20
, pp. 3146-3155
-
-
Lai, Y.1
Wu, B.2
Chen, L.3
Zhao, H.4
-
18
-
-
84856226487
-
CHEK2 genomic and proteomic analyses reveal genetic inactivation or endogenous activation across the 60 cell lines of the US National Cancer Institute
-
Zoppoli G, Solier S, Reinhold WC, Liu H, Connelly JW Jr, et al. CHEK2 genomic and proteomic analyses reveal genetic inactivation or endogenous activation across the 60 cell lines of the US National Cancer Institute. Oncogene.
-
Oncogene
-
-
Zoppoli, G.1
Solier, S.2
Reinhold, W.C.3
Liu, H.4
Connelly Jr., J.W.5
-
19
-
-
77950287156
-
Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron
-
Reinhold WC, Mergny JL, Liu H, Ryan M, Pfister TD, et al. (2010) Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron. Cancer Res 70: 2191-2203.
-
(2010)
Cancer Res
, vol.70
, pp. 2191-2203
-
-
Reinhold, W.C.1
Mergny, J.L.2
Liu, H.3
Ryan, M.4
Pfister, T.D.5
-
21
-
-
67650687092
-
CellMiner: a relational database and query tool for the NCI-60 cancer cell lines
-
Shankavaram UT, Varma S, Kane D, Sunshine M, Chary KK, et al. (2009) CellMiner: a relational database and query tool for the NCI-60 cancer cell lines. BMC Genomics 10: 277.
-
(2009)
BMC Genomics
, vol.10
, pp. 277
-
-
Shankavaram, U.T.1
Varma, S.2
Kane, D.3
Sunshine, M.4
Chary, K.K.5
-
22
-
-
23844551199
-
Stochastic models inspired by hybridization theory for short oligonucleotide arrays
-
Wu Z, Irizarry RA, (2005) Stochastic models inspired by hybridization theory for short oligonucleotide arrays. J Comput Biol 12: 882-893.
-
(2005)
J Comput Biol
, vol.12
, pp. 882-893
-
-
Wu, Z.1
Irizarry, R.A.2
-
24
-
-
33644875050
-
The HUGO Gene Nomenclature Database, 2006 updates
-
Eyre TA, Ducluzeau F, Sneddon TP, Povey S, Bruford EA, et al. (2006) The HUGO Gene Nomenclature Database, 2006 updates. Nucleic Acids Res 34: D319-321.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Eyre, T.A.1
Ducluzeau, F.2
Sneddon, T.P.3
Povey, S.4
Bruford, E.A.5
|