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Volumn 6, Issue 5, 2012, Pages 578-587

Characterization of a modified amplification approach for improved STR recovery from severely degraded skeletal elements

Author keywords

Degraded skeletal remains; Missing persons; Short tandem repeats

Indexed keywords

KETOCONAZOLE;

EID: 84863775077     PISSN: 18724973     EISSN: 18780326     Source Type: Journal    
DOI: 10.1016/j.fsigen.2012.01.010     Document Type: Article
Times cited : (25)

References (43)
  • 1
    • 0026071738 scopus 로고
    • Population variation of human mtDNA control region sequences detected by enzymatic amplification and sequence-specific oligonucleotide probes
    • M. Stoneking, D. Hedgecock, R.G. Higuchi, L. Vigilant, H.A. Erlich, Population variation of human mtDNA control region sequences detected by enzymatic amplification and sequence-specific oligonucleotide probes, Am. J. Hum. Genet. 48 (1991) 370-382. (Pubitemid 21891601)
    • (1991) American Journal of Human Genetics , vol.48 , Issue.2 , pp. 370-382
    • Stoneking, M.1    Hedgecock, D.2    Higuchi, R.G.3    Vigilant, L.4    Erlich, H.A.5
  • 3
    • 0002260414 scopus 로고    scopus 로고
    • Mitochondrial DNA sequence analysis - Validation and use for forensic casework
    • M.M. Holland, T.J. Parsons, Mitochondrial DNA sequence analysis - validation and use for forensic casework, Forensic Sci. Rev. 11 (1999).
    • (1999) Forensic Sci. Rev. , vol.11
    • Holland, M.M.1    Parsons, T.J.2
  • 5
    • 84858444387 scopus 로고    scopus 로고
    • Automatable full demineralization DNA extraction procedure from degraded skeletal remaina
    • doi:10.1016/j.fsigen.2011.08.004
    • S. Amory, R. Huel, A. Bilić, O. Loreille, T.J. Parsons, Automatable full demineralization DNA extraction procedure from degraded skeletal remaina, Forensic Sci. Int. Genet. (2011), doi:10.1016/j.fsigen.2011. 08.004.
    • (2011) Forensic Sci. Int. Genet.
    • Amory, S.1    Huel, R.2    Bilić, A.3    Loreille, O.4    Parsons, T.J.5
  • 6
    • 34548579114 scopus 로고    scopus 로고
    • Ancient DNA extraction from bones and teeth
    • N. Rohland, M. Hofreiter, Ancient DNA extraction from bones and teeth, Nat. Protoc. 2 (2007) 1756-1762.
    • (2007) Nat. Protoc. , vol.2 , pp. 1756-1762
    • Rohland, N.1    Hofreiter, M.2
  • 7
    • 74749099380 scopus 로고    scopus 로고
    • Technical note: Efficiency of total demineralization and ion-exchange column for DNA extraction from bone
    • S.B. Seo, A. Zhang, H.Y. Kim, J.A. Yi, H.Y. Lee, D.H. Shin, et al., Technical note: Efficiency of total demineralization and ion-exchange column for DNA extraction from bone, Am. J. Phys. Anthropol. 141 (2010) 158-162.
    • (2010) Am. J. Phys. Anthropol. , vol.141 , pp. 158-162
    • Seo, S.B.1    Zhang, A.2    Kim, H.Y.3    Yi, J.A.4    Lee, H.Y.5    Shin, D.H.6
  • 8
    • 0035061991 scopus 로고    scopus 로고
    • Less is more - Length reduction of STR amplicons using redesigned primers
    • DOI 10.1007/s004140000162
    • P. Wiegand, M. Kleiber, Less is more - length reduction of STR amplicons using redesigned primers, Int. J. Legal Med. 114 (2001) 285-287. (Pubitemid 32367166)
    • (2001) International Journal of Legal Medicine , vol.114 , Issue.4-5 , pp. 285-287
    • Wiegand, P.1    Kleiber, M.2
  • 9
    • 0036709313 scopus 로고    scopus 로고
    • A powerful, novel, multiplex typing system for six short tandem repeat loci and the allele frequency distributions in two Japanese regional populations
    • DOI 10.1002/1522-2683(200210)23:19<3332::AID-ELPS3332>3.0.CO;2-8
    • H. Ohtaki, T. Yamamoto, T. Yoshimoto, R. Uchihi, C. Ooshima, Y. Katsumata, et al., A powerful, novel, multiplex typing system for six short tandem repeat loci and the allele frequency distributions in two Japanese regional populations, Electrophoresis 23 (2002) 3332-3340. (Pubitemid 35230216)
    • (2002) Electrophoresis , vol.23 , Issue.19 , pp. 3332-3340
    • Ohtaki, H.1    Yamamoto, T.2    Yoshimoto, T.3    Uchihi, R.4    Ooshima, C.5    Katsumata, Y.6    Tokunaga, K.7
  • 10
    • 0043282586 scopus 로고    scopus 로고
    • The development of reduced size STR amplicons as tools for analysis of degraded DNA
    • J.M. Butler, Y. Shen, B.R. McCord, The development of reduced size STR amplicons as tools for analysis of degraded DNA, J. Forensic Sci. 48 (2003) 1054-1064. (Pubitemid 37107410)
    • (2003) Journal of Forensic Sciences , vol.48 , Issue.5 , pp. 1054-1064
    • Butler, J.M.1    Shen, Y.2    McCord, B.R.3
  • 11
    • 11844272718 scopus 로고    scopus 로고
    • Characterization of new miniSTR loci to aid analysis of degraded DNA
    • JFS2004216
    • M.D. Coble, J.M. Butler, Characterization of new miniSTR loci to aid analysis of degraded DNA, J. Forensic Sci. 50 (2005) 43-53. (Pubitemid 40094199)
    • (2005) Journal of Forensic Sciences , vol.50 , Issue.1 , pp. 43-53
    • Coble, M.D.1    Butler, J.M.2
  • 14
    • 47349122123 scopus 로고    scopus 로고
    • Development and validation of the AmpF1STR MiniFiler PCR amplification kit: A miniSTR multiplex for the analysis of degraded and/or PCR inhibited DNA
    • DOI 10.1111/j.1556-4029.2008.00760.x
    • J.J. Mulero, C.W. Chang, R.E. Lagace, D.Y. Wang, J.L. Bas, T.P. McMahon, et al., Development and validation of the AmpFlSTR MiniFiler PCR Amplification Kit: a MiniSTR multiplex for the analysis of degraded and/or PCR inhibited DNA, J. Forensic Sci. 53 (2008) 838-852. (Pubitemid 352000127)
    • (2008) Journal of Forensic Sciences , vol.53 , Issue.4 , pp. 838-852
    • Mulero, J.J.1    Chang, C.W.2    Lagace, R.E.3    Wang, D.Y.4    Bas, J.L.5    McMahon, T.P.6    Hennessy, L.K.7
  • 15
    • 84863777719 scopus 로고    scopus 로고
    • Applied, Biosystems, Improved recovery of interpretable results from challenging samples using the Identifiler1 Plus Kit - An overview of test site data
    • Applied, Biosystems, Improved recovery of interpretable results from challenging samples using the Identifiler1 Plus Kit - an overview of test site data, Forensic News (2009).
    • (2009) Forensic News
  • 16
    • 77956923471 scopus 로고    scopus 로고
    • World War One Italian and Austrian soldier identification project: DNA results of the first case
    • A. Piccinini, S. Coco, W. Parson, C. Cattaneo, D. Gaudio, R. Barbazza, et al., World War One Italian and Austrian soldier identification project: DNA results of the first case, Forensic Sci. Int. Genet. 4 (2010) 329-333.
    • (2010) Forensic Sci. Int. Genet. , vol.4 , pp. 329-333
    • Piccinini, A.1    Coco, S.2    Parson, W.3    Cattaneo, C.4    Gaudio, D.5    Barbazza, R.6
  • 19
    • 62849097815 scopus 로고    scopus 로고
    • Mystery solved: The identification of the two missing Romanov children using DNA analysis
    • M.D. Coble, O.M. Loreille, M.J. Wadhams, S.M. Edson, K. Maynard, C.E. Meyer, et al., Mystery solved: the identification of the two missing Romanov children using DNA analysis, PLoS One 4 (2009) e4838.
    • (2009) PLoS One , vol.4
    • Coble, M.D.1    Loreille, O.M.2    Wadhams, M.J.3    Edson, S.M.4    Maynard, K.5    Meyer, C.E.6
  • 22
    • 70149108266 scopus 로고    scopus 로고
    • Evaluation of modified Yfiler amplification strategy for compromised samples
    • K.A. Sturk,M.D. Coble, S.M. Barritt, J.A. Irwin, Evaluation of modified Yfiler amplification strategy for compromised samples, Croat. Med. J. 50 (2009) 228-238.
    • (2009) Croat. Med. J. , vol.50 , pp. 228-238
    • Sturk, K.A.1    Coble, M.D.2    Barritt, S.M.3    Irwin, J.A.4
  • 23
    • 77956902270 scopus 로고    scopus 로고
    • Simple and highly effective DNA extraction methods from old skeletal remains using silica columns
    • H.Y. Lee, M.J. Park, N.Y. Kim, J.E. Sim, W.I. Yang, K.J. Shin, Simple and highly effective DNA extraction methods from old skeletal remains using silica columns, Forensic Sci. Int. Genet. 4 (2010) 275-280.
    • (2010) Forensic Sci. Int. Genet. , vol.4 , pp. 275-280
    • Lee, H.Y.1    Park, M.J.2    Kim, N.Y.3    Sim, J.E.4    Yang, W.I.5    Shin, K.J.6
  • 24
    • 79953861177 scopus 로고    scopus 로고
    • Factors affecting the STR amplification success in poorly preserved bone samples
    • M.T. Putkonen, J.U. Palo, J.M. Cano, M. Hedman, A. Sajantila, Factors affecting the STR amplification success in poorly preserved bone samples, Investig. Genet. 1 (2010) 9.
    • (2010) Investig. Genet. , vol.1 , pp. 9
    • Putkonen, M.T.1    Palo, J.U.2    Cano, J.M.3    Hedman, M.4    Sajantila, A.5
  • 25
    • 0038349431 scopus 로고    scopus 로고
    • Development of a quality, high throughput DNA analysis procedure for skeletal samples to assist with the identification of victims from the World Trade Center attacks
    • M.M. Holland, C.A. Cave, C.A. Holland, T.W. Bille, Development of a Quality, High Throughput DNA Analysis Procedure for Skeletal Samples to Assist with the Identification of Victims from the World Trade Center Attacks, Success rates of nuclear short tandem repeat typing from different skeletal elements, Croat. Med. J. 44 (2003) 264-272. (Pubitemid 36828142)
    • (2003) Croatian Medical Journal , vol.44 , Issue.3 , pp. 264-272
    • Holland, M.M.1    Cave, C.A.2    Holland, C.A.3    Bille, T.W.4
  • 27
    • 0242711368 scopus 로고    scopus 로고
    • The thermal history of human fossils and the likelihood of successful DNA amplification
    • DOI 10.1016/S0047-2484(03)00106-4
    • C.I. Smith, A.T. Chamberlain, M.S. Riley, C. Stringer, M.J. Collins, The thermal history of human fossils and the likelihood of successful DNA amplification, J. Hum. Evol. 45 (2003) 203-217. (Pubitemid 37379382)
    • (2003) Journal of Human Evolution , vol.45 , Issue.3 , pp. 203-217
    • Smith, C.I.1    Chamberlain, A.T.2    Riley, M.S.3    Stringer, C.4    Collins, M.J.5
  • 29
    • 0034710344 scopus 로고    scopus 로고
    • An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA
    • DOI 10.1016/S0379-0738(00)00158-4, PII S0379073800001584
    • P. Gill, J. Whitaker, C. Flaxman, N. Brown, J. Buckleton, An investigation of the rigor of interpretation rules for STRs derived from less than 100 pg of DNA, Forensic Sci. Int. 112 (2000) 17-40. (Pubitemid 30406944)
    • (2000) Forensic Science International , vol.112 , Issue.1 , pp. 17-40
    • Gill, P.1    Whitaker, J.2    Flaxman, C.3    Brown, N.4    Buckleton, J.5
  • 30
    • 0035582255 scopus 로고    scopus 로고
    • A comparison of the characteristics of profiles produced with the AMPFlSTR SGM Plus multiplex system for both standard and low copy number (LCN) STR DNA analysis
    • DOI 10.1016/S0379-0738(01)00557-6, PII S0379073801005576
    • J.P.Whitaker, E.A. Cotton, P. Gill, A comparison of the characteristics of profiles produced with the AMPFlSTR SGM Plus multiplex system for both standard and low copy number (LCN) STR DNA analysis, Forensic Sci. Int. 123 (2001) 215-223. (Pubitemid 33122043)
    • (2001) Forensic Science International , vol.123 , Issue.2-3 , pp. 215-223
    • Whitaker, J.P.1    Cotton, E.A.2    Gill, P.3
  • 31
    • 70149105013 scopus 로고    scopus 로고
    • Validation of testing and interpretation protocols for low template DNA samples using AmpFlSTR Identifiler
    • T. Caragine, R. Mikulasovich, J. Tamariz, E. Bajda, J. Sebestyen, H. Baum, et al., Validation of testing and interpretation protocols for low template DNA samples using AmpFlSTR Identifiler, Croat. Med. J. 50 (2009) 250-267.
    • (2009) Croat. Med. J. , vol.50 , pp. 250-267
    • Caragine, T.1    Mikulasovich, R.2    Tamariz, J.3    Bajda, E.4    Sebestyen, J.5    Baum, H.6
  • 33
    • 6344284907 scopus 로고    scopus 로고
    • Naming the dead confronting the realities of rapid identification of degraded skeletal remains
    • S.M. Edson, J.P. Ross, M.D. Coble, T.J. Parsons, S.M. Barritt, Naming the dead confronting the realities of rapid identification of degraded skeletal remains, Forensic Sci. Rev. 16 (2004) 63-90.
    • (2004) Forensic Sci. Rev. , vol.16 , pp. 63-90
    • Edson, S.M.1    Ross, J.P.2    Coble, M.D.3    Parsons, T.J.4    Barritt, S.M.5
  • 34
    • 0032377357 scopus 로고    scopus 로고
    • Approximate is better than exact for interval estimation of binomial proportions
    • A. Agresti, B.A. Coull, Approximate is better than exact for interval estimation of binomial proportions, Am. Stat. 52 (1998) 119-126.
    • (1998) Am. Stat. , vol.52 , pp. 119-126
    • Agresti, A.1    Coull, B.A.2
  • 36
    • 84863778271 scopus 로고    scopus 로고
    • Biology of STR
    • Chapter 6: Elsevier Academic Press, Burlington, MA
    • J. Butler, Forensic DNA Typing; Chapter 6: Biology of STR, Elsevier Academic Press, Burlington, MA, 2005, p. 126.
    • (2005) Forensic DNA Typing , pp. 126
    • Butler, J.1
  • 37
    • 77956892828 scopus 로고    scopus 로고
    • Validation and development of interpretation guidelines for low copy number (LCN) DNA profiling in New Zealand using the AmpFlSTR SGM Plus multiplex
    • S. Petricevic, J. Whitaker, J. Buckleton, S. Vintiner, J. Patel, P. Simon, et al., Validation and development of interpretation guidelines for low copy number (LCN) DNA profiling in New Zealand using the AmpFlSTR SGM Plus multiplex, Forensic Sci. Int. Genet. 4 (2010) 305-310.
    • (2010) Forensic Sci. Int. Genet. , vol.4 , pp. 305-310
    • Petricevic, S.1    Whitaker, J.2    Buckleton, J.3    Vintiner, S.4    Patel, J.5    Simon, P.6
  • 39
    • 2642547993 scopus 로고    scopus 로고
    • False homozygosities at various loci revealed by discrepancies between commercial kits: Implications for genetic databases
    • DOI 10.1016/j.forsciint.2004.02.001, PII S0379073804000817
    • M. Delamoye, C. Duverneuil, K. Riva, M. Leterreux, S. Taieb, P. De Mazancourt, False homozygosities at various loci revealed by discrepancies between commercial kits: implications for genetic databases, Forensic Sci. Int. 143 (2004) 47-52. (Pubitemid 38726154)
    • (2004) Forensic Science International , vol.143 , Issue.1 , pp. 47-52
    • Delamoye, M.1    Duverneuil, C.2    Riva, K.3    Leterreux, M.4    Taieb, S.5    De Mazancourt, P.6
  • 41
    • 0034963987 scopus 로고    scopus 로고
    • DNA typing from skeletal remains: Evaluation of multiplex and megaplex STR systems on DNA isolated from bone and teeth samples
    • A. Alonso, S. Andelinovic, P. Martin, D. Sutlovic, I. Erceg, E. Huffine, et al., DNA typing from skeletal remains: evaluation of multiplex and megaplex STR systems on DNA isolated from bone and teeth samples, Croat. Med. J. 42 (2001) 260-266.
    • (2001) Croat. Med. J. , vol.42 , pp. 260-266
    • Alonso, A.1    Andelinovic, S.2    Martin, P.3    Sutlovic, D.4    Erceg, I.5    Huffine, E.6
  • 42
    • 0034682945 scopus 로고    scopus 로고
    • Ancient DNA: Do it right or not at all
    • A. Cooper, H.N. Poinar, Ancient DNA: do it right or not at all, Science 289 (2000) 1139.
    • (2000) Science , vol.289 , pp. 1139
    • Cooper, A.1    Poinar, H.N.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.