A new "miniSTR-multiplex" displaying reduced amplicon lengths for the analysis of degraded DNA

International Journal of Legal Medicine

Volumn 120, Issue 2, 2006, Pages 115-120

  Grubwieser, P ^a   Muhlmann R ^a   Berger, B ^a   Niederstatter H ^a   Pavlic, M ^a   Parson, W ^a  

^a INNSBRUCK MEDICAL UNIVERSITY   (Austria)

Author keywords

Casework; D16S539; D18S51; D2S1338; Degraded DNA; FGA; Forensic; STRs; TH01

Indexed keywords

AMELOGENIN; PRIMER DNA;

AMPLICON; ARTICLE; CONTROLLED STUDY; DNA DEGRADATION; DNA DETERMINATION; GENE LOCUS; GENOTYPE; HUMAN; MULTIPLEX POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SHORT TANDEM REPEAT;

AMELOGENIN; DEOXYRIBONUCLEASE I; DNA DEGRADATION, NECROTIC; DNA FINGERPRINTING; DNA PRIMERS; HUMANS; POLYMERASE CHAIN REACTION; TANDEM REPEAT SEQUENCES;

EID: 32944459995     PISSN: 09379827     EISSN: 14371596     Source Type: Journal    
DOI: 10.1007/s00414-005-0013-6     Document Type: Article

References (17)

1. Alvarez GA, Munoz I, Pestoni C, Lareu MV, Rodriguez-Calvo MS, Carracedo A (1996) Effect of environmental factors on PCR-DNA analysis from dental pulp. Int J Leg Med 109:125-129
2. Pfeiffer H, Huhne J, Seitz B, Brinkmann B (1999) Influence of soil storage and exposure period on DNA recovery from teeth. Int J Leg Med 112:142-144
3. Schneider PM, Bender K, Mayr WR et al (2004) STR analysis of artificially degraded DNA - results of a collaborative European exercise. Forensic Sci Int 139:123-134
4. Bender K, Farfan MJ, Schneider PM (2004) Preparation of degraded human DNA under controlled conditions. Forensic Sci Int 139:135-140
5. Butler JM, Shen Y, McCord BR (2003) The development of reduced size STR amplicons as tools for analysis of degraded DNA. J Forensic Sci 48:1054-1064
6. Grubwieser P, Mühlmann R, Parson W (2003) New sensitive amplification primers for the STR locus D2S1338 for degraded casework DNA. Int J Leg Med 117:185-188
7. Hellmann A, Rohleder U, Schmitter H, Wittig M (2001) STR typing of human te logen hairs - a new approach. Int J Leg Med 114:269-273
8. Ricci U, Klintschar M, Neuhuber F, Giovannucci Uzielli ML (1998) Study on the STR TPOX in an Italian and an Austrian population using two different primer pairs and three different electrophoretic methods. Int J Leg Med 111:212-214
9. Wiegand P, Kleiber M (2001) Less is more - length reduction of STR amplicons using redesigned primers. Int J Leg Med 114:285-287
10. Yoshida K, Sekiguchi K, Kasai K, Sato H, Seta S, Sensabaugh GF (1997) Evaluation of new primers for CSF1PO. Int J Leg Med 110:36-38
11. Oberacher H, Parson W, Mühlmann R, Huber CG (2001) Analysis of polymerase chain reaction products by on-line liquid chromatography-mass spectrometry for genotyping of polymorphic short tandem repeat loci. Anal Chem 73:5109-5115
12. Coble MD, Butler JM (2005) Characterization of new miniSTR loci to aid analysis of degraded DNA. J Forensic Sci 50:43-53
13. Schneider PM, Martin PD (2001) Criminal DNA databases: the European situation. Forensic Sci Int 119:232-238
14. Walsh PS, Metzger DA, Higuchi R (1991) Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. BioTechniques 10:506-513
15. Parson W, Parsons TJ, Scheithauer R, Holland MM (1998) Population data for 101 Austrian Caucasian mitochondrial DNA d-loop sequences: application of mtDNA sequence analysis to a forensic case. Int J Leg Med 111:124-132
16. Mannucci A, Sullivan KM, Ivanov PL, Gill P (1994) Forensic application of a rapid and quantitative DNA sex test by amplification of the X-Y homologous gene amelogenin. Int J Leg Med 106:190-193
17. Parson W, Steinlechner M (2001) Efficient DNA database laboratory strategy for high through-put STR typing of reference samples. Forensic Sci Int 122:1-6