Network assemblies in the functional brain

Current Opinion in Neurology

Volumn 25, Issue 4, 2012, Pages 384-391

  Sepulcre, Jorge ^a,b   Sabuncu, Mert R ^b,c   Johnson, Keith A ^a,d  

^a MASSACHUSETTS GENERAL HOSPITAL   (United States)

^b Athinioula A Martinos Center for Biomedical Imaging   (United States)

^c MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^d BRIGHAM AND WOMEN S HOSPITAL   (United States)

Author keywords

Brain connectome; Brain network; Functional connectivity; Graph theory; Neuroimaging

Indexed keywords

BOLD SIGNAL; BRAIN FUNCTION; BRAIN REGION; COGNITION; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; NEUROPSYCHOLOGY; NEUROSCIENCE; REVIEW; THEORETICAL STUDY; VISUAL CORTEX;

ANIMALS; BRAIN; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MODELS, NEUROLOGICAL; NERVE NET; NEURAL PATHWAYS; NEUROIMAGING;

EID: 84863720359     PISSN: 13507540     EISSN: 14736551     Source Type: Journal    
DOI: 10.1097/WCO.0b013e328355a8e8     Document Type: Review

References (64)

1. Beckmann CF, Smith SM. Probabilistic independent component analysis for functional magnetic resonance imaging. IEEE Trans Med Imaging 2004; 23:137-152.
2. Bellec P, Rosa-Neto P, Lyttelton OC, et al. Multilevel bootstrap analysis of stable clusters in resting-state fMRI. Neuroimage 2010; 51:1126-1139.
3. Yeo BT, Krienen FM, Sepulcre J, et al. The organization of the human cerebral cortex estimated by intrinsic functional connectivity. J Neurophysiol 2011; 106:1125-1165.
4. Bullmore ET, Bassett DS. Brain graphs: graphical models of the human brain connectome. Annu Rev Clin Psychol 2011; 7:113-140.
5. Sepulcre J, Liu H, Talukdar T, et al. The organization of local and distant functional connectivity in the human brain. PLoS Comput Biol 2010; 6:e1000808.
6. Sporns O, Chialvo DR, Kaiser M, et al. Organization, development and function of complex brain networks. Trends Cogn Sci 2004; 8:418-425. (Pubitemid 39179905)
7. Sporns O, Honey CJ. Small worlds inside big brains. Proc Natl Acad Sci USA 2006; 103:19219-19220. (Pubitemid 46026014)
8. Gusnard DA, Akbudak E, Shulman GL, et al. Medial prefrontal cortex and selfreferential mental activity: relation to a default mode of brain function. Proc Natl Acad Sci USA 2001; 98:4259-4264. (Pubitemid 32249932)
9. Raichle ME, MacLeod AM, Snyder AZ, et al. A default mode of brain function. Proc Natl Acad Sci USA 2001; 98:676-682. (Pubitemid 32105102)
10. Goldman-Rakic PS. Topography of cognition: parallel distributed networks in primate association cortex. Annu Rev Neurosci 1988; 11:137-156.
11. Jones EG, Powell TP. An anatomical study of converging sensory pathways within the cerebral cortex of the monkey. Brain 1970; 93:793-820.
12. Biswal B, Yetkin FZ, Haughton VM, et al. Functional connectivity in the motor cortex of resting human brain using echo-planar MRI. Magn Reson Med 1995; 34:537-541.
13. Biswal BB, Mennes M, Zuo XN, et al. Toward discovery science of human brain function. Proc Natl Acad Sci USA 2010; 107:4734-4739.
14. Fox MD, Raichle ME. Spontaneous fluctuations in brain activity observed with functional magnetic resonance imaging. Nat Rev Neurosci 2007; 8:700-711. (Pubitemid 47283145)
15. Behrens TE, Sporns O. Human connectomics. Curr Opin Neurobiol 2011; 22:1-10.
16. Bressler SL, Menon V. Large-scale brain networks in cognition: emerging methods and principles. Trends Cogn Sci 2010; 14:277-290.
17. Bullmore E, Sporns O. Complex brain networks: graph theoretical analysis of structural and functional systems. Nat Rev Neurosci 2009; 10:186-198.
18. Greicius M. Resting-state functional connectivity in neuropsychiatric disorders. Curr Opin Neurol 2008; 21:424-430.
19. Bassett DS, Bullmore ET. Human brain networks in health and disease. Curr Opin Neurol 2009; 22:340-347.
20. Catani M, ffytche DH. The rises and falls of disconnection syndromes. Brain 2005; 128 (Pt 10):2224-2239. (Pubitemid 41407963)
21. Felleman DJ, Van Essen DC. Distributed hierarchical processing in the primate cerebral cortex. Cereb Cortex 1991; 1:1-47.
22. Mesulam MM. Large-scale neurocognitive networks and distributed processing for attention, language, and memory. Ann Neurol 1990; 28:597-613.
23. Wig GS, Schlaggar BL, Petersen SE. Concepts and principles in the analysis of brain networks. Ann N Y Acad Sci 2011; 1224:126-146.
24. Sporns O, Honey CJ, Kotter R. Identification and classification of hubs in brain networks. PLoS ONE 2007; 2:e1049.
25. Stam CJ, Reijneveld JC. Graph theoretical analysis of complex networks in the brain. Nonlinear Biomed Phys 2007; 1:3.
26. Power JD, Barnes KA, Snyder AZ, et al. Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion. Neuroimage 2012; 59:2142-2154.
27. Rubinov M, Sporns O. Weight-conserving characterization of complex functional brain networks. Neuroimage 2011; 56:2068-2079.
28. Van Dijk KR, Hedden T, Venkataraman A, et al. Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization. J Neurophysiol 2010; 103:297-321.
29. Van Dijk KR, Sabuncu MR, Buckner RL. The influence of head motion on intrinsic functional connectivity MRI. Neuroimage 2012; 59:431-438.
30. Zalesky A, Fornito A, Bullmore E. On the use of correlation as a measure of network connectivity. Neuroimage 2012; 60:2096-2106.
31. Smith SM, Miller KL, Salimi-Khorshidi G, et al. Network modelling methods for FMRI. Neuroimage 2011; 54:875-891.
32. Buckner RL, Sepulcre J, Talukdar T, et al. Cortical hubs revealed by intrinsic functional connectivity: mapping, assessment of stability, and relation to Alzheimer's disease. J Neurosci 2009; 29:1860-1873.
33. Zuo XN, Ehmke R, Mennes M, et al. Network centrality in the human functional connectome. Cereb Cortex 2011. [Epub ahead of print]
34. Ferrarini L, Veer IM, Baerends E. Hierarchical functional modularity in the resting-state human brain. Hum Brain Mapp 2009; 30:2220-2231.
35. Distler C, Boussaoud D, Desimone R, et al. Cortical connections of inferior temporal area TEO in macaque monkeys. J Comp Neurol 1993; 334:125-150. (Pubitemid 23219239)
36. Maunsell JH, Van Essen DC. The connections of the middle temporal visual area (MT) and their relationship to a cortical hierarchy in the macaque monkey. J Neurosci 1983; 3:2563-2586. (Pubitemid 14187133)
37. Ungerleider LG, Haxby JV. 'What' and 'where' in the human brain. Curr Opin Neurobiol 1994; 4:157-165.
38. Mesulam MM. Representation, inference, and transcendent encoding in neurocognitive networks of the human brain. Ann Neurol 2008; 64:367-378.
39. Mesulam MM. From sensation to cognition. Brain 1998; 121:1013-1052.
40. Pandya DN, Kuypers HG. Cortico-cortical connections in the rhesus monkey. Brain Res 1969; 13:13-36.
41. Achard S, Salvador R, Whitcher B, et al. A resilient, low-frequency, smallworld human brain functional network with highly connected association cortical hubs. J Neurosci 2006; 26:63-72. (Pubitemid 43090914)
42. Salvador R, Suckling J, Coleman MR, et al. Neurophysiological architecture of functional magnetic resonance images of human brain. Cereb Cortex 2005; 15:1332-1342.
43. Eguíluz VM, Chialvo DR, Cecchi GA, et al. Scale-free brain functional networks. Phys Rev Lett 2005; 14:018102.
44. Bassett DS, Bullmore E, Verchinski BA, et al. Hierarchical organization of human cortical networks in health and schizophrenia. J Neurosci 2008; 28:9239-9248.
45. Meunier D, Lambiotte R, Fornito A, et al. Hierarchical modularity in human brain functional networks. Front Neuroinformatics 2009; 3:37.
46. Mars RB, Sallet J, Schuffelgen U, et al. Connectivity-based subdivisions of the human right 'temporoparietal junction area': evidence for different areas participating in different cortical networks. Cereb Cortex 2011. [Epub ahead of print]
47. Leech R, Kamourieh S, Beckmann CF, et al. Fractionating the default mode network: distinct contributions of the ventral and dorsal posterior cingulate cortex to cognitive control. J Neurosci 2011; 31:3217-3224.
48. Doucet G, Naveau M, Petit L, et al. Brain activity at rest: a multiscale hierarchical functional organization. J Neurophysiol 2011; 105:2753-2763.
49. Li R, Chen K, Fleisher AS, et al. Large-scale directional connections among multi resting-state neural networks in human brain: a functional MRI and Bayesian network modeling study. Neuroimage 2011; 56:1035-1042.
50. Power JD, Cohen AL, Nelson SM, et al. Functional network organization of the human brain. Neuron 2011; 72:665-678.
51. Menon V, Uddin LQ. Saliency, switching, attention and control: a network model of insula function. Brain Struct Funct 2010; 214:655-667.
52. Seeley WW, Menon V, Schatzberg AF, et al. Dissociable intrinsic connectivity networks for salience processing and executive control. J Neurosci 2007; 27:2349-2356. (Pubitemid 46340968)
53. Uddin LQ, Supekar KS, Ryali S, et al. Dynamic reconfiguration of structural and functional connectivity across core neurocognitive brain networks with development. J Neurosci 2011; 31:18578-18589.
54. Sepulcre J, Sabuncu MR, Yeo BT, et al. Stepwise connectivity of the modal cortex reveals the multimodal organization of the human brain. J Neurosci 2012 (in press).
55. Downar J, Crawley AP, Mikulis DJ, et al. A multimodal cortical network for the detection of changes in the sensory environment. Nat Neurosci 2000; 3:277-283. (Pubitemid 30140791)
56. Spreng RN, Stevens WD, Chamberlain JP, et al. Default network activity, coupled with the frontoparietal control network, supports goal-directed cognition. Neuroimage 2010; 53:303-317.
57. Gao W, Gilmore JH, Shen D, et al. The synchronization within and interaction between the default and dorsal attention networks in early infancy. Cereb Cortex 2012. [Epub ahead of print]
58. Baria AT, Baliki MN, Parrish T, et al. Anatomical and functional assemblies of brain BOLD oscillations. J Neurosci 2011; 31:7910-7919.
59. Kitzbichler MG, Smith ML, Christensen SR, et al. Broadband criticality of human brain network synchronization. PLoS Comput Biol 2009; 5:e1000314.
60. Liao W, Mantini D, Zhang Z, et al. Evaluating the effective connectivity of resting state networks using conditional Granger causality. Biol Cybern 2010; 102:57-69.
61. Feldt S, Bonifazi P, Cossart R. Dissecting functional connectivity of neuronal microcircuits: experimental and theoretical insights. Trends Neurosci 2011; 34:225-236.
62. Menon V. Large-scale brain networks and psychopathology: a unifying triple network model. Trends Cogn Sci 2011; 15:483-506.
63. Seeley WW, Crawford RK, Zhou J, et al. Neurodegenerative diseases target large-scale human brain networks. Neuron 2009; 62:42-52.
64. Mesulam M. The evolving landscape of human cortical connectivity: facts and inferences. Neuroimage 2011.