Hierarchical functional modularity in the resting-state human brain

Human Brain Mapping

Volumn 30, Issue 7, 2009, Pages 2220-2231

  Ferrarini, Luca ^a   Veer, Ilya M ^a,b   Baerends, Evelinda ^a   Van Tol, Marie José ^a,b   Renken, Remco J ^b,c   Van Der Wee, Nic J A ^a,b   Veltman, Dirk J ^a,b,c,d   Aleman, André ^a   Zitman, Frans G ^a   Penninx, Brenda W J H ^a,b   Van Buchem, Mark A ^a   Reiber, Johan H C ^a   Rombouts, Serge A R B ^a,b   Milles, Julien ^a  

^a LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

^b NESDA Research Consortium   (Netherlands)

^c UNIVERSITY MEDICAL CENTER GRONINGEN   (Netherlands)

^d VU UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

Complex network; Modularity; Resting state functional MRI; Small world

Indexed keywords

ADULT; ARTICLE; BRAIN FUNCTION; BRAIN FUNCTIONAL CONNECTIVITY MAPPING; BRAIN MAPPING; BRAIN REGION; FEMALE; FUNCTIONAL MAGNETIC RESONANCE IMAGING; HUMAN; HUMAN EXPERIMENT; MALE; NORMAL HUMAN; PRIORITY JOURNAL; QUALITATIVE ANALYSIS; REST;

ADULT; BRAIN; BRAIN MAPPING; CLUSTER ANALYSIS; FEMALE; HUMANS; MAGNETIC RESONANCE IMAGING; MALE; MIDDLE AGED; NEURAL PATHWAYS; YOUNG ADULT;

EID: 67649641813     PISSN: 10659471     EISSN: None     Source Type: Journal    
DOI: 10.1002/hbm.20663     Document Type: Article

References (46)

1. Achard S, Salvador R, Whitcher B, Suckling J, Bullmore E (2006): A resiliant, low-frequency, small-world human brain functional network with highly connected association cortical hubs. J Neurosci 26:63-72. (Pubitemid 43090914)
2. Adamic L, Huberman B (2000): Power-law distribution of the world wide web. Science 287:2115.
3. Albert R, Jeong H, Barabási A (2000): Error and attack tolerance of complex networks. Nature 406:378-381. (Pubitemid 30625551)
4. Barabási A (2005): Taming complexity. Nature 1:68-70.
5. Barabási A, Albert R (1999): Emergence of scaling in random networks. Science 286:509-512.
6. Bullinaria J (2007): Understanding the emergence of modularityin neural systems. Cogn Sci 31:673-695.
7. Damoiseaux J, Rombouts S, Barkhof F, Scheltens P, Stam C, Smith S, Beckmann C (2006): Consistent resting-state networks across healthy subjects. Proc Natl Acad Sci USA 103:13848-13853. (Pubitemid 44413996)
8. Danon L, Díaz-Guilera A, Duch J, Arenas A (2005): Comparing community structure identification. J Stat Mech P09008. Doi:10.1088/1742-5468/ 2005/09/P09008. (Pubitemid 41415263)
9. DeLuca M, Beckmann C, Stefano ND, Matthews P, Smith S (2006): fMRI resting state networks define distinct modes of long-distance interactions in the human brain. Neuroimage 29:1359-1367. (Pubitemid 43184199)
10. DeMartino F, Gentile F, Esposito F, Balsi M, DiSalle F, Goebel R, Formisano E (2007): Classification of fMRI independent component using ic-fingerprints and support vector machine classifiers. Neuroimage 34:177-194. (Pubitemid 44765254)
11. Drachman D (2005): Do we have brain to spare? Neurology 64:2004-2005.
12. Eguíluz V, Chialvo D, Cecchi G, Baliki M, Apkarian A (2005): Scale-free brain functional networks. Phys Rev Lett 94:018102.
13. Eisen M, Spellman P, Brown P, Botstein D (1998): Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA 95:14863-14868. (Pubitemid 29003722)
14. Hallinan J (2003): Self-organization leads to hierarchical modularity in an internet community. In: Knowledge-Based Intelligent Information and Engineering Systems, 7th International Conference, KES 2003, Oxford, UK, September 3-5, 2003, Proceedings, Part I. pp 914-920.
15. Haynes J, Rees G (2005): Predicting the orientation of invisible stimuli from activity in human primary visual cortex. Nat Neurosci 8:686-691. (Pubitemid 40594212)
16. Haynes J, Rees G (2006): Decoding mental states from brain activity in humans. Nat Rev Neurosci 7:523-534. (Pubitemid 43989773)
17. He Y, Chen Z, Evans A (2008): Structural insights into aberrant topological patterns of large-scale cortical networks in alzheimer's disease. J Neurosci 28:4756-4766.
18. Honey C, Kötter R, Breakspear M, Sporns O (2007): Network structure of cerebral cortex shapes functional connectivity on multiple time scales. Proc Natl Acad Sci USA 104:10240-10245. (Pubitemid 47175293)
19. Jenkinson M, Smith S (2001): A global optimisation method for robust affine registration of brain images. Med Image Anal 5:143-156. (Pubitemid 35282800)
20. Jenkinson M, Bannister P, Brady J, Smith S (2002): Improved optimisation for the robust and accurate linear registration and motion correction of brain images. Neuroimage 17:825-841. (Pubitemid 35317016)
21. Kaas J (2000): Why is brain size so important: Design problems and solutions as neocortex gets bigger or smaller. Brain Mind 1:7-23. (Pubitemid 32780819)
22. Newman M (2003): The structure and function of complex networks. SIAM Rev 45:167-256.
23. Newman M (2006): Modularity and community structure in networks. Proc Natl Acad Sci USA 103:8577-8582. (Pubitemid 43878062)
24. Newman M, Girvan M (2004): Finding and evaluating community structure in networks. Phys Rev 69:026113.
25. Palla G, Derényi I, Farkas I, Vicsek T (2005): Uncovering the overlapping community structure of complex networks in nature and society. Nature 435:814-818. (Pubitemid 40839731)
26. Penninx B, Beekman A, Smit J, Zitman F, Nolen W, Spinhoven P, Cuijpers P, de Jong P, van Marwijk H, Assendelft W, van der Meer K, Verhaak P, Wensing M, de Graaf R, Hoogendijk W, Ormel J, van Dyck R (2008): The Netherlands study of depression and anxiety (nesda): Rationales, objectives, and methods. Int J Meth Psychiatr Res 17:121-140.
27. Radicchi F, Castellano C, Cecconi F, Loreto V, Parisi D (2004): Defining and identifying communities in networks. Proc Natl Acad Sci 101:2658-2663. (Pubitemid 38327665)
28. Ravasz E, Somera A, Mongru D, Oltvai Z, Barabási A (2002): Hierarchical organization of modularity in metabolic networks. Science 297:1551-1555. (Pubitemid 34971002)
29. Reijneveld J, Ponten S, Berendse H, Stam C (2007): The application of graph theoretical analysis to complex networks in the brain. Clin Neurophysiol 118:2317-2331. (Pubitemid 47539271)
30. Rubinov M, Knock S, Stam C, Micheloyannis S, Harris A, Williams L, Breakspear M: Small-world properties of nonlinear brain activity in schizophrenia. Hum Brain Mapp (in press).
31. Salvador R, Suckling J, Coleman M, Pickard J, Menon D, Bullmore E (2005): Neurophysiological architecture of functional magnetic resonance images of human brain. Cereb Cortex 15:1332-1342. (Pubitemid 41191541)
32. Salvador R, Martínez A, Pomarol-Clotet E, Sarró S, Suckling J, Bullmore E (2007): Frequency based mutual information measures between clusters of brain regions in functional magnetic resonance imaging. Neuroimage 35:83-88. (Pubitemid 46264352)
33. Salvador R, Martínez A, Pomarol-Clotet E, Gomar J, Vila F, Sarró S, Capdevila A, Bullmore E (2008): A simple view of the brain through a frequency-specific functional connectivity measure. Neuroimage 39:279-289. (Pubitemid 350110534)
34. Smit D, Stam C, Posthuma D, Boomsma D, de Geus E (2007): Heritability of small-world networks in the brain: A graph theoretical analysis of resting-state EEG functional connectivity. Hum Brain Mapp (in press).
35. Smith S (2002): Fast robust automated brain extraction. Hum Brain Mapp 17:143-155. (Pubitemid 35253488)
36. Smith S, Jenkinson M, Woolrich M, Beckmann C, Behrens T, Johansen-Berg H, Bannister P, DeLuca M, Drobnjak I, Flitney D, Niazy R, Saunders J, Vickers J, Zhang Y, DeStefano N, Brady J, Matthews P (2004): Advances in functional and structural MR image analysis and implementation as FSL. Neuroimage 23(Suppl 1):208-219. (Pubitemid 39421720)
37. Smith S, Beckmann C, Ramnani N, Woolrich M, Bannister P, Jenkinson M, Matthews P, McGonigle D (2005): Variability in fMRI: A re-examination of intersession differences. Hum Brain Mapp 242:248-257. (Pubitemid 40327850)
38. Soffer S, Vázquez A (2005): Network clustering coefficient without degree-correlation biases. Phys Rev Lett 71:057101.
39. Sporns O, Honey C (2006): Small world inside big brains. Proc Natl Acad Sci 103:19219-19220. (Pubitemid 46026014)
40. Sporns O, Kötter R (2004): Motifs in brain networks. PLoS Biol 2:1910-1918. (Pubitemid 40280488)
41. Sporns O, Tononi G, Kötter R (2005): The human connectome: A structural description of the human brain. PLoS Comput Biol 1:245-251.
42. Sporns O, Honey C, Kötter R (2007): Identification and classification of hubs in brain networks. PLoS ONE 10:1-14. (Pubitemid 351560119)
43. Stam C, Jones B, Nolte G, Breakspear M, Scheltens P (2007): Small-world networks and functional connectivity in Alzheimer's disease. Cereb Cortex 17:92-99. (Pubitemid 44973898)
44. Stam C, Reijnveld J (2007): Graph theoretical analysis of complex networks in the brain. Nonlinear Biomed Phys 1:3.
45. Supekar K, Menon V, Rubin D, Musen M, Greicius M (2008): Network analysis of intrinsic functional brain connectivity in Alzheimer's disease. PLoS Comput Biol 4:e1000100. (Pubitemid 351914786)
46. Tzourio-Mazoyer N, Landeau B, Papathnassious D, Crivello F, Etard O, Delcroix N, Mazoyer B, Joliot M (2002): Automated anatomical labeling of activation in SPM using macroscopic anatomical parecellation of the MNI MRI single-subject brain. Neuroimage 15:273-289. (Pubitemid 34852226)