메뉴 건너뛰기




Volumn 13, Issue 6, 2012, Pages 452-464

Genomic organization and sequence dynamics of the AvrPiz-t locus in Magnaporthe oryzae

Author keywords

Dynamics; Magnaporthe oryzae; Recombination; Synteny; Transposon complex

Indexed keywords

ARTICLE; GENE LOCUS; GENE ORDER; GENE SEQUENCE; GENETIC VARIABILITY; GENOME; MAGNAPORTHE ORYZAE; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RICE; SEQUENCE ANALYSIS; SYNTENY; TRANSPOSON;

EID: 84863444149     PISSN: 16731581     EISSN: 18621783     Source Type: Journal    
DOI: 10.1631/jzus.B1100338     Document Type: Article
Times cited : (8)

References (34)
  • 1
    • 4544263341 scopus 로고    scopus 로고
    • A putative polyketide synthase/peptide synthetase from Magnaporthe grisea signals pathogen attack to resistant rice
    • DOI 10.1105/tpc.104.022715
    • Böhnert, H. U., Fudal, I., Dioh, W., Tharreau, D., Notteghem, J. L., Lebrun, M. H., 2004. A putative polyketide synthase/peptide synthetase from Magnaporthe grisea signals pathogen attack to resistant rice. Plant Cell, 16(9):2499-2513. [doi:10.1105/tpc.104.022715] (Pubitemid 39247087)
    • (2004) Plant Cell , vol.16 , Issue.9 , pp. 2499-2513
    • Bohnert, H.U.1    Fudal, I.2    Dioh, W.3    Tharreau, D.4    Notteghem, J.-L.5    Lebrun, M.-H.6
  • 2
    • 33846809331 scopus 로고    scopus 로고
    • Molecular mapping of two cultivar-specific avirulence genes in the rice blast fungus Magnaporthe grisea
    • DOI 10.1007/s00438-006-0179-8
    • Chen, Q. H., Wang, Y. C., Li, A. N., Zhang, Z. G., Zheng, X. B., 2007. Molecular mapping of two cultivar-specific avirulence genes in the rice blast fungus Magnaporthe grisea. Mol. Genet. Genomics, 277(2):139-148. [doi:10. 1007/s00438-006-0179-8] (Pubitemid 46208347)
    • (2007) Molecular Genetics and Genomics , vol.277 , Issue.2 , pp. 139-148
    • Chen, Q.H.1    Wang, Y.C.2    Li, A.N.3    Zhang, Z.G.4    Zheng, X.B.5
  • 3
    • 44649085135 scopus 로고    scopus 로고
    • Magnaporthe grisea avirulence gene ACE1 belongs to an infection-specific gene cluster involved in secondary metabolism
    • DOI 10.1111/j.1469-8137.2008.02459.x
    • Collemare, J., Pianfetti, M., Houlle, A. E., Morin, D., Camborde, L., Gagey, M. J., Barbisan, C., Fudal, I., Lebrun, M. H., Böhnert, H. U., 2008. Magnaporthe grisea avirulence gene ACE1 belongs to an infection-specific gene cluster involved in secondary metabolism. New Phytol., 179(1):196-208. [doi:10.1111/j.1469-8137.2008. 02459.x] (Pubitemid 351783180)
    • (2008) New Phytologist , vol.179 , Issue.1 , pp. 196-208
    • Collemare, J.1    Pianfetti, M.2    Houlle, A.-E.3    Morin, D.4    Camborde, L.5    Gagey, M.-J.6    Barbisan, C.7    Fudal, I.8    Lebrun, M.-H.9    Bohnert, H.U.10
  • 4
    • 0141468761 scopus 로고    scopus 로고
    • Transposable elements in filamentous fungi
    • DOI 10.1146/annurev.micro.57.030502.091029
    • Daboussi, M. J., Capy, P., 2003. Transposable elements in filamentous fungi. Annu. Rev. Microbiol., 57(1):275-299. [doi:10.1146/annurev. micro.57.030502.091029] (Pubitemid 37392944)
    • (2003) Annual Review of Microbiology , vol.57 , pp. 275-299
    • Daboussi, M.-J.1    Capy, P.2
  • 5
    • 78449261719 scopus 로고    scopus 로고
    • Diversification and evolution of the avirulence gene AVR-Pita1 in field isolates of Magnaporthe oryzae
    • doi:10.1016/j.fgb. 2010.08.003
    • Dai, Y., Jia, Y., Correll, J., Wang, X., Wang, Y., 2010. Diversification and evolution of the avirulence gene AVR-Pita1 in field isolates of Magnaporthe oryzae. Fungal Genet. Biol., 47(12):973-980. [doi:10.1016/j.fgb. 2010.08.003]
    • (2010) Fungal Genet. Biol. , vol.47 , Issue.12 , pp. 973-980
    • Dai, Y.1    Jia, Y.2    Correll, J.3    Wang, X.4    Wang, Y.5
  • 7
    • 0034141960 scopus 로고    scopus 로고
    • Mapping of avirulence genes in the rice blast fungus, Magnaporthe grisea, with RFLP and RAPD markers
    • Dioh, W., Tharreau, D., Notteghem, J. L., Orbach, M., Lebrun, M. H., 2000. Mapping of avirulence genes in the rice blast fungus, Magnaporthe grisea, with RFLP and RAPD markers. Mol. Plant Microbe Interact., 13(2):217-227. [doi:10.1094/MPMI.2000.13.2.217] (Pubitemid 30061605)
    • (2000) Molecular Plant-Microbe Interactions , vol.13 , Issue.2 , pp. 217-227
    • Dioh, W.1    Tharreau, D.2    Notteghem, J.L.3    Orbach, M.4    Lebrun, M.-H.5
  • 8
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing, B., Green, P., 1998. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res., 8(3):186-194. [doi:10.1101/gr.8.3.186] (Pubitemid 28177230)
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 9
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., Hillier, L., Wendl, M. C., Green, P., 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res., 8(3):175-185. [doi:10.1101/gr.8.3.175] (Pubitemid 28177229)
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 10
    • 0036007221 scopus 로고    scopus 로고
    • Analysis of the structure of the AVR1-CO39 avirulence locus in virulent rice-infecting isolates of Magnaporthe grisea
    • Farman, M. L., Eto, Y., Nakao, T., Tosa, Y., Nakayashiki, H., Mayama, S., Leong, S. A., 2002. Analysis of the structure of the AVR1-CO39 avirulence locus in virulent riceinfecting isolates of Magnaporthe grisea. Mol. Plant Microbe Interact., 15(1):6-16. [doi:10.1094/MPMI.2002. 15.1.6] (Pubitemid 34096261)
    • (2002) Molecular Plant-Microbe Interactions , vol.15 , Issue.1 , pp. 6-16
    • Farman, M.L.1    Eto, Y.2    Nakao, T.3    Tosa, Y.4    Nakayashiki, H.5    Mayama, S.6    Leong, S.A.7
  • 12
    • 23944491177 scopus 로고    scopus 로고
    • Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea
    • DOI 10.1016/j.fgb.2005.05.001, PII S108718450500071X
    • Fudal, I., Böhnert, H. U., Tharreau, D., Lebrun, M. H., 2005. Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea. Fungal Genet. Biol., 42(9):761-772. [doi:10.1016/j.fgb.2005.05.001] (Pubitemid 41188174)
    • (2005) Fungal Genetics and Biology , vol.42 , Issue.9 , pp. 761-772
    • Fudal, I.1    Bohnert, H.U.2    Tharreau, D.3    Lebrun, M.-H.4
  • 13
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon, D., Abajian, C., Green, P., 1998. Consed: a graphical tool for sequence finishing. Genome Res., 8(3):195-202. [doi:10.1101/gr.8.3.195] (Pubitemid 28177231)
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 14
    • 0028791673 scopus 로고
    • Mg-SINE: A short interspersed nuclear element from the rice blast fungus, Magnaporthe grisea
    • doi:10.1073/pnas.92.24.11125
    • Kachroo, P., Leong, S. A., Chattoo, B. B., 1995. Mg-SINE: a short interspersed nuclear element from the rice blast fungus, Magnaporthe grisea. PNAS, 92(24):11125-11129. [doi:10.1073/pnas.92.24.11125]
    • (1995) PNAS , vol.92 , Issue.24 , pp. 11125-11129
    • Kachroo, P.1    Leong, S.A.2    Chattoo, B.B.3
  • 15
    • 0029411311 scopus 로고
    • The PWL host specificity gene family in the blast fungus Magnaporthe grisea
    • Kang, S., Sweigard, J. A., Valent, B., 1995. The PWL host specificity gene family in the blast fungus Magnaporthe grisea. Mol. Plant Microbe Interact., 8(6):939-948. [doi:10.1094/MPMI-8-0939] (Pubitemid 3023321)
    • (1995) Molecular Plant-Microbe Interactions , vol.8 , Issue.6 , pp. 939-948
    • Kang Seogchan1    Sweigard, J.A.2    Valent, B.3
  • 16
    • 0035059327 scopus 로고    scopus 로고
    • Gain of virulence caused by insertion of a Pot3 transposon in a Magnaporthe grisea avirulence gene
    • Kang, S., Lebrun, M. H., Farrall, L., Valent, B., 2001. Gain of virulence caused by insertion of a Pot3 transposon in a Magnaporthe grisea avirulence gene. Mol. Plant Microbe Interact., 14(5):671-674. [doi:10.1094/MPMI.2001.14. 5.671] (Pubitemid 32333386)
    • (2001) Molecular Plant-Microbe Interactions , vol.14 , Issue.5 , pp. 671-674
    • Kang, S.1    Lebrun, M.H.2    Farrall, L.3    Valent, B.4
  • 17
    • 43549120525 scopus 로고    scopus 로고
    • Genome organization and evolution of the AVR-pita avirulence gene family in the Magnaporthe grisea species complex
    • DOI 10.1094/MPMI-21-5-0658
    • Khang, C. H., Park, S. Y., Lee, Y. H., Valent, B., Kang, S., 2008. Genome organization and evolution of the AVR-Pita avirulence gene family in the Magnaporthe grisea species complex. Mol. Plant Microbe Interact., 21(5):658-670. [doi:10.1094/MPMI-21-5-0658] (Pubitemid 351679744)
    • (2008) Molecular Plant-Microbe Interactions , vol.21 , Issue.5 , pp. 658-670
    • Chang, H.K.1    Park, S.-Y.2    Lee, Y.-H.3    Valent, B.4    Kang, S.5
  • 18
    • 0005624071 scopus 로고
    • Interaction of genes controlling avirulence/virulence of Magnaporthe grisea on rice cultivar Katy
    • doi:10.1094/Phyto-83-375
    • Lau, G. W., Chao, C. T., Ellingboe, A. H., 1993. Interaction of genes controlling avirulence/virulence of Magnaporthe grisea on rice cultivar Katy. Phytopathology, 83(4):375-382. [doi:10.1094/Phyto-83-375]
    • (1993) Phytopathology , vol.83 , Issue.4 , pp. 375-382
    • Lau, G.W.1    Chao, C.T.2    Ellingboe, A.H.3
  • 19
    • 77953038129 scopus 로고    scopus 로고
    • The ins and outs of host recognition of magnaporthe oryzae
    • Gufstason, J. P., Taylor, J., Stacey, G. Eds., New York
    • Leong, S. A., 2008. The Ins and Outs of Host Recognition of Magnaporthe oryzae. In: Gufstason, J. P., Taylor, J., Stacey, G. (Eds.), The Genomics of Disease. Springer Science+Business Media, New York, p. 119-216.
    • (2008) The Genomics of Disease. Springer Science+Business Media , pp. 119-216
    • Leong, S.A.1
  • 20
    • 64749116348 scopus 로고    scopus 로고
    • The Magnaporthe oryzae avirulence gene AvrPiz-t encodes a predicted secreted protein that triggers the immunity in rice mediated by the blast resistance gene Piz-t
    • doi:10.1094/MPMI-22-4-0411
    • Li, W., Wang, B., Wu, J., Lu, G., Hu, Y., Zhang, X., Zhang, Z., Zhao, Q., Feng, Q., Zhang, H., et al., 2009. The Magnaporthe oryzae avirulence gene AvrPiz-t encodes a predicted secreted protein that triggers the immunity in rice mediated by the blast resistance gene Piz-t. Mol. Plant Microbe Interact., 22(4):411-420. [doi:10.1094/MPMI-22-4-0411]
    • (2009) Mol. Plant Microbe Interact. , vol.22 , Issue.4 , pp. 411-420
    • Li, W.1    Wang, B.2    Wu, J.3    Lu, G.4    Hu, Y.5    Zhang, X.6    Zhang, Z.7    Zhao, Q.8    Feng, Q.9    Zhang, H.10
  • 21
    • 77953072156 scopus 로고    scopus 로고
    • Recent progress and understanding of the molecular mechanisms of the rice-Magnaporthe oryzae interaction
    • doi:10. 1111/j.1364-3703.2009.00607.x
    • Liu, J., Wang, X., Mitchell, T., Hu, Y., Liu, X., Dai, L., Wang, G. L., 2010. Recent progress and understanding of the molecular mechanisms of the rice-Magnaporthe oryzae interaction. Mol. Plant Pathol., 11(3):419-427. [doi:10. 1111/j.1364-3703.2009.00607.x]
    • (2010) Mol. Plant Pathol. , vol.11 , Issue.3 , pp. 419-427
    • Liu, J.1    Wang, X.2    Mitchell, T.3    Hu, Y.4    Liu, X.5    Dai, L.6    Wang, G.L.7
  • 22
    • 68249097196 scopus 로고    scopus 로고
    • Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication
    • doi:10.1371/journal.pgen. 1000549
    • Ma, L. J., Ibrahim, A. S., Skory, C., Grabherr, M. G., Burger, G., Butler, M., Elias, M., Idnurm, A., Lang, B. F., Sone, T., et al., 2009. Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication. PLoS Genet., 5(7):e1000549. [doi:10.1371/journal.pgen. 1000549]
    • (2009) PLoS Genet. , vol.5 , Issue.7
    • Ma, L.J.1    Ibrahim, A.S.2    Skory, C.3    Grabherr, M.G.4    Burger, G.5    Butler, M.6    Elias, M.7    Idnurm, A.8    Lang, B.F.9    Sone, T.10
  • 23
    • 64949131932 scopus 로고    scopus 로고
    • Molecular cloning and characterization of the AVR-Pia locus from a Japanese field isolate of Magnaporthe oryzae
    • doi:10.1111/j.1364-3703.2009.00534.x
    • Miki, S., Matsui, K., Kito, H., Otsuka, K., Ashizawa, T., Yasuda, N., Fukiya, S., Sato, J., Hirayae, K., Fujita, Y., et al., 2009. Molecular cloning and characterization of the AVR-Pia locus from a Japanese field isolate of Magnaporthe oryzae. Mol. Plant Pathol., 10(3):361-374. [doi:10.1111/j.1364-3703. 2009.00534.x]
    • (2009) Mol. Plant Pathol. , vol.10 , Issue.3 , pp. 361-374
    • Miki, S.1    Matsui, K.2    Kito, H.3    Otsuka, K.4    Ashizawa, T.5    Yasuda, N.6    Fukiya, S.7    Sato, J.8    Hirayae, K.9    Fujita, Y.10
  • 24
    • 0034525256 scopus 로고    scopus 로고
    • A telomeric avirulence gene determines efficacy for the rice blast resistance gene Pi-ta
    • DOI 10.1105/tpc.12.11.2019
    • Orbach, M. J., Farrall, L., Sweigard, J. A., Chumley, F. G., Valent, B., 2000. A telomeric avirulence gene determines efficacy for the rice blast resistance gene Pi-ta. Plant Cell, 12(11):2019-2032. [doi:10.1105/tpc.12.11. 2019] (Pubitemid 32053392)
    • (2000) Plant Cell , vol.12 , Issue.11 , pp. 2019-2032
    • Orbach, M.J.1    Farrall, L.2    Sweigard, J.A.3    Chumley, F.G.4    Valent, B.5
  • 25
    • 0021695885 scopus 로고
    • Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics
    • doi:10.1073/pnas.81.24.8014
    • Saghai-Maroof, M. A., Soliman, K. M., Jorgensen, R. A., Allard, R. W., 1984. Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. PNAS, 81(24):8014-8018. [doi:10.1073/pnas.81.24.8014]
    • (1984) PNAS , vol.81 , Issue.24 , pp. 8014-8018
    • Saghai-Maroof, M.A.1    Soliman, K.M.2    Jorgensen, R.A.3    Allard, R.W.4
  • 27
    • 2942591971 scopus 로고    scopus 로고
    • BAC end sequences and a physical map reveal transposable element content and clustering patterns in the genome of Magnaporthe grisea
    • DOI 10.1016/j.fgb.2004.02.003, PII S1087184504000374
    • Thon, M. R., Martin, S. L., Goff, S., Wing, R. A., Dean, R. A., 2004. BAC end sequences and a physical map reveal transposable element content and clustering patterns in the genome of Magnaporthe grisea. Fungal Genet. Biol., 41(7):657-666. [doi:10.1016/j.fgb.2004.02.003] (Pubitemid 38750246)
    • (2004) Fungal Genetics and Biology , vol.41 , Issue.7 , pp. 657-666
    • Thon, M.R.1    Martin, S.L.2    Goff, S.3    Wing, R.A.4    Dean, R.A.5
  • 28
    • 33745033975 scopus 로고    scopus 로고
    • The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae
    • DOI 10.1186/gb-2006-7-2-r16
    • Thon, M. R., Pan, H., Diener, S., Papalas, J., Taro, A., Mitchell, T. K., Dean, R. A., 2006. The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae. Genome Biol., 7(2):R16. [doi:10.1186/gb-2006-7-2-r16] (Pubitemid 43871854)
    • (2006) Genome Biology , vol.7 , Issue.2
    • Thon, M.R.1    Pan, H.2    Diener, S.3    Papalas, J.4    Taro, A.5    Mitchell, T.K.6    Dean, R.A.7
  • 29
    • 0036669928 scopus 로고    scopus 로고
    • Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley
    • DOI 10.1105/tpc.002238
    • Wei, F., Wing, R. A., Wise, R. P., 2002. Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley. Plant Cell, 14(8):1903-1917. [doi:10.1105/tpc.002238] (Pubitemid 35008255)
    • (2002) Plant Cell , vol.14 , Issue.8 , pp. 1903-1917
    • Wei, F.1    Wing, R.A.2    Wise, R.P.3
  • 30
    • 14844355218 scopus 로고    scopus 로고
    • High-resolution genome-wide mapping of transposon integration in mammals
    • DOI 10.1128/MCB.25.6.2085-2094.2005
    • Yant, S. R., Wu, X., Huang, Y., Garrison, B., Burgess, S. M., Kay, M. A., 2005. High-resolution genome-wide mapping of transposon integration in mammals. Mol. Cell. Biol., 25(6):2085-2094. [doi:10.1128/MCB.25.6.2085-2094.2005] (Pubitemid 40354609)
    • (2005) Molecular and Cellular Biology , vol.25 , Issue.6 , pp. 2085-2094
    • Yant, S.R.1    Wu, X.2    Huang, Y.3    Garrison, B.4    Burgess, S.M.5    Kay, M.A.6
  • 31
    • 33846799358 scopus 로고    scopus 로고
    • Partial mapping of avirulence genes AVR-Pii and AVR-Pia in the rice blast fungus Magnaporthe oryzae
    • Yasuda, N., Noguchi, M. T., Fujita, Y., 2006. Partial mapping of avirulence genes AVR-Pii and AVR-Pia in the rice blast fungus Magnaporthe oryzae. Can. J. Plant Pathol., 28(3):494-498. [doi:10.1080/07060660609507325] (Pubitemid 46202796)
    • (2006) Canadian Journal of Plant Pathology , vol.28 , Issue.3 , pp. 494-498
    • Yasuda, N.1    Tsujimoto Noguchi, M.2    Fujita, Y.3
  • 32
    • 67651085221 scopus 로고    scopus 로고
    • Association genetics reveals three novel avirulence genes from the rice blast fungal pathogen Magnaporthe oryzae
    • doi:10.1105/tpc.109.066324
    • Yoshida, K., Saitoh, H., Fujisawa, S., Kanzaki, H., Matsumura, H., Tosa, Y., Chuma, I., Takano, Y., Win, J., Kamoun, S., et al., 2009. Association genetics reveals three novel avirulence genes from the rice blast fungal pathogen Magnaporthe oryzae. Plant Cell, 21(5):1573-1591. [doi:10.1105/tpc.109. 066324]
    • (2009) Plant Cell , vol.21 , Issue.5 , pp. 1573-1591
    • Yoshida, K.1    Saitoh, H.2    Fujisawa, S.3    Kanzaki, H.4    Matsumura, H.5    Tosa, Y.6    Chuma, I.7    Takano, Y.8    Win, J.9    Kamoun, S.10
  • 33
    • 33750213264 scopus 로고    scopus 로고
    • The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea
    • DOI 10.1094/MPMI-19-1216
    • Zhou, B., Qu, S., Liu, G., Dolan, M., Sakai, H., Lu, G., Bellizzi, M., Wang, G. L., 2006. The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea. Mol. Plant Microbe Interact., 19(11):1216-1228. [doi:10.1094/MPMI-19-1216] (Pubitemid 44607333)
    • (2006) Molecular Plant-Microbe Interactions , vol.19 , Issue.11 , pp. 1216-1228
    • Zhou, B.1    Qu, S.2    Liu, G.3    Dolan, M.4    Sakai, H.5    Lu, G.6    Bellizzi, M.7    Wang, G.-L.8
  • 34
    • 34548260896 scopus 로고    scopus 로고
    • Instability of the Magnaporthe oryzae avirulence gene AVR-Pita alters virulence
    • DOI 10.1016/j.fgb.2007.02.003, PII S1087184507000291
    • Zhou, E., Jia, Y., Singh, P., Correll, J. C., Lee, F. N., 2007. Instability of the Magnaporthe oryzae avirulence gene AVR-Pita alters virulence. Fungal Genet. Biol., 44(10):1024-1034. [doi:10.1016/j.fgb.2007.02.003] (Pubitemid 47321236)
    • (2007) Fungal Genetics and Biology , vol.44 , Issue.10 , pp. 1024-1034
    • Zhou, E.1    Jia, Y.2    Singh, P.3    Correll, J.C.4    Lee, F.N.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.