메뉴 건너뛰기




Volumn 7, Issue 3, 2012, Pages

Genotyping performance between saliva and blood-derived genomic DNAS on the DMET array: A comparison

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; BIOLOGICAL MARKER; DNA;

EID: 84863380688     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0033968     Document Type: Article
Times cited : (43)

References (21)
  • 1
    • 77951746794 scopus 로고    scopus 로고
    • DMET microarray technology for pharmacogenomics-based personalized medicine
    • Burmester JK, Sedova M, Shapero MH, Mansfield E, (2010) DMET microarray technology for pharmacogenomics-based personalized medicine. Methods Mol Biol 632: 99-124.
    • (2010) Methods Mol Biol , vol.632 , pp. 99-124
    • Burmester, J.K.1    Sedova, M.2    Shapero, M.H.3    Mansfield, E.4
  • 2
  • 3
    • 67650264006 scopus 로고    scopus 로고
    • The Affymetrix DMET platform and pharmacogenetics in drug development
    • Deeken J, (2009) The Affymetrix DMET platform and pharmacogenetics in drug development. Curr Opin Mol Ther 11: 260-268.
    • (2009) Curr Opin Mol Ther , vol.11 , pp. 260-268
    • Deeken, J.1
  • 5
    • 77952886405 scopus 로고    scopus 로고
    • A pharmacogenetic study of docetaxel and thalidomide in patients with castration-resistant prostate cancer using the DMET genotyping platform
    • Deeken JF, Cormier T, Price DK, Sissung TM, Steinberg SM, et al. (2010) A pharmacogenetic study of docetaxel and thalidomide in patients with castration-resistant prostate cancer using the DMET genotyping platform. Pharmacogenomics J 10: 191-199.
    • (2010) Pharmacogenomics J , vol.10 , pp. 191-199
    • Deeken, J.F.1    Cormier, T.2    Price, D.K.3    Sissung, T.M.4    Steinberg, S.M.5
  • 6
    • 35448999255 scopus 로고    scopus 로고
    • Collection of blood, saliva, and buccal cell samples in a pilot study on the Danish nurse cohort: comparison of the response rate and quality of genomic DNA
    • Hansen TV, Simonsen MK, Nielsen FC, Hundrup YA, (2007) Collection of blood, saliva, and buccal cell samples in a pilot study on the Danish nurse cohort: comparison of the response rate and quality of genomic DNA. Cancer Epidemiol Biomarkers Prev 16: 2072-2076.
    • (2007) Cancer Epidemiol Biomarkers Prev , vol.16 , pp. 2072-2076
    • Hansen, T.V.1    Simonsen, M.K.2    Nielsen, F.C.3    Hundrup, Y.A.4
  • 8
    • 62449286261 scopus 로고    scopus 로고
    • DNA microarray technology in the clinical environment: the AmpliChip CYP450 test for CYP2D6 and CYP2C19 genotyping
    • de Leon J, Susce MT, Johnson M, Hardin M, Maw L, et al. (2009) DNA microarray technology in the clinical environment: the AmpliChip CYP450 test for CYP2D6 and CYP2C19 genotyping. CNS Spectr 14: 19-34.
    • (2009) CNS Spectr , vol.14 , pp. 19-34
    • de Leon, J.1    Susce, M.T.2    Johnson, M.3    Hardin, M.4    Maw, L.5
  • 9
    • 33749368693 scopus 로고    scopus 로고
    • Quality and quantity of saliva DNA obtained from the self-administrated oragene method-a pilot study on the cohort of Swedish men
    • Rylander-Rudqvist T, Hakansson N, Tybring G, Wolk A, (2006) Quality and quantity of saliva DNA obtained from the self-administrated oragene method-a pilot study on the cohort of Swedish men. Cancer Epidemiol Biomarkers Prev 15: 1742-1745.
    • (2006) Cancer Epidemiol Biomarkers Prev , vol.15 , pp. 1742-1745
    • Rylander-Rudqvist, T.1    Hakansson, N.2    Tybring, G.3    Wolk, A.4
  • 10
    • 78650247382 scopus 로고    scopus 로고
    • Effect of saliva processing on bacterial DNA extraction
    • Polgarova K, Behuliak M, Celec P, (2010) Effect of saliva processing on bacterial DNA extraction. New Microbiol 33: 373-379.
    • (2010) New Microbiol , vol.33 , pp. 373-379
    • Polgarova, K.1    Behuliak, M.2    Celec, P.3
  • 13
    • 33646832209 scopus 로고    scopus 로고
    • Evaluation of saliva as a source of human DNA for population and association studies
    • Quinque D, Kittler R, Kayser M, Stoneking M, Nasidze I, (2006) Evaluation of saliva as a source of human DNA for population and association studies. Anal Biochem 353: 272-277.
    • (2006) Anal Biochem , vol.353 , pp. 272-277
    • Quinque, D.1    Kittler, R.2    Kayser, M.3    Stoneking, M.4    Nasidze, I.5
  • 14
    • 77949740924 scopus 로고    scopus 로고
    • Saliva-derived DNA performs well in large-scale, high-density single-nucleotide polymorphism microarray studies
    • Bahlo M, Stankovich J, Danoy P, Hickey PF, Taylor BV, et al. (2010) Saliva-derived DNA performs well in large-scale, high-density single-nucleotide polymorphism microarray studies. Cancer Epidemiol Biomarkers Prev 19: 794-798.
    • (2010) Cancer Epidemiol Biomarkers Prev , vol.19 , pp. 794-798
    • Bahlo, M.1    Stankovich, J.2    Danoy, P.3    Hickey, P.F.4    Taylor, B.V.5
  • 15
    • 54249110843 scopus 로고    scopus 로고
    • High fractions of exogenous DNA in human buccal samples reduce the quality of large-scale genotyping
    • Herraez DL, Stoneking M, (2008) High fractions of exogenous DNA in human buccal samples reduce the quality of large-scale genotyping. Anal Biochem 383: 329-331.
    • (2008) Anal Biochem , vol.383 , pp. 329-331
    • Herraez, D.L.1    Stoneking, M.2
  • 16
    • 57149147611 scopus 로고    scopus 로고
    • A comparison of the genotyping results using DNA obtained from blood and saliva
    • Philibert RA, Zadorozhnyaya O, Beach SR, Brody GH, (2008) A comparison of the genotyping results using DNA obtained from blood and saliva. Psychiatr Genet 18: 275-281.
    • (2008) Psychiatr Genet , vol.18 , pp. 275-281
    • Philibert, R.A.1    Zadorozhnyaya, O.2    Beach, S.R.3    Brody, G.H.4
  • 17
    • 34347380733 scopus 로고    scopus 로고
    • Multiplex assay for comprehensive genotyping of genes involved in drug metabolism, excretion, and transport
    • Daly TM, Dumaual CM, Miao X, Farmen MW, Njau RK, et al. (2007) Multiplex assay for comprehensive genotyping of genes involved in drug metabolism, excretion, and transport. Clin Chem 53: 1222-1230.
    • (2007) Clin Chem , vol.53 , pp. 1222-1230
    • Daly, T.M.1    Dumaual, C.M.2    Miao, X.3    Farmen, M.W.4    Njau, R.K.5
  • 18
    • 80052093409 scopus 로고    scopus 로고
    • Saliva is a reliable and practical source of germline DNA for genome-wide studies in chronic lymphocytic leukemia
    • Rasi S, Bruscaggin A, Rinaldi A, Cresta S, Fangazio M, et al. (2011) Saliva is a reliable and practical source of germline DNA for genome-wide studies in chronic lymphocytic leukemia. Leuk Res 35: 1419-1422.
    • (2011) Leuk Res , vol.35 , pp. 1419-1422
    • Rasi, S.1    Bruscaggin, A.2    Rinaldi, A.3    Cresta, S.4    Fangazio, M.5
  • 19
    • 80655141268 scopus 로고    scopus 로고
    • Single nucleotide polymorphisms of ABCC5 and ABCG1 transporter genes correlate to irinotecan-associated gastrointestinal toxicity in colorectal cancer patients: A DMET microarray profiling study
    • Di Martino MT, Arbitrio M, Leone E, Guzzi PH, Saveria Rotundo M, et al. (2011) Single nucleotide polymorphisms of ABCC5 and ABCG1 transporter genes correlate to irinotecan-associated gastrointestinal toxicity in colorectal cancer patients: A DMET microarray profiling study. Cancer Biol Ther 12.
    • (2011) Cancer Biol Ther , vol.12
    • Di Martino, M.T.1    Arbitrio, M.2    Leone, E.3    Guzzi, P.H.4    Saveria Rotundo, M.5
  • 20
    • 79960838263 scopus 로고    scopus 로고
    • A peroxisome proliferator-activated receptor gamma (PPARG) polymorphism is associated with zoledronic acid-related osteonecrosis of the jaw in multiple myeloma patients: analysis by DMET microarray profiling
    • Di Martino MT, Arbitrio M, Guzzi PH, Leone E, Baudi F, et al. (2011) A peroxisome proliferator-activated receptor gamma (PPARG) polymorphism is associated with zoledronic acid-related osteonecrosis of the jaw in multiple myeloma patients: analysis by DMET microarray profiling. Br J Haematol 154: 529-533.
    • (2011) Br J Haematol , vol.154 , pp. 529-533
    • Di Martino, M.T.1    Arbitrio, M.2    Guzzi, P.H.3    Leone, E.4    Baudi, F.5
  • 21
    • 33947603700 scopus 로고    scopus 로고
    • Comprehensive assessment of metabolic enzyme and transporter genes using the Affymetrix Targeted Genotyping System
    • Dumaual C, Miao X, Daly TM, Bruckner C, Njau R, et al. (2007) Comprehensive assessment of metabolic enzyme and transporter genes using the Affymetrix Targeted Genotyping System. Pharmacogenomics 8: 293-305.
    • (2007) Pharmacogenomics , vol.8 , pp. 293-305
    • Dumaual, C.1    Miao, X.2    Daly, T.M.3    Bruckner, C.4    Njau, R.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.