-
1
-
-
0035421508
-
RBP1L1, a retinoblastoma-binding protein-related gene encoding an antigenic epitope abundantly expressed in human carcinomas and normal testis
-
Cao, J., Gao, T., Stanbridge, E. J., and Irie, R. (2001) RBP1L1, a retinoblastoma- binding protein-related gene encoding an antigenic epitope abundantly expressed in human carcinomas and normal testis. J. Natl. Cancer Inst. 93, 1159-1165 (Pubitemid 32780968)
-
(2001)
Journal of the National Cancer Institute
, vol.93
, Issue.15
, pp. 1159-1165
-
-
Cao, J.-N.1
Gao, T.-W.2
Stanbridge, E.J.3
Irie, R.4
-
2
-
-
0347723868
-
Breast Cancer Metastasis Suppressor 1 (BRMS1) Forms Complexes with Retinoblastoma-binding Protein 1 (RBP1) and the mSin3 Histone Deacetylase Complex and Represses Transcription
-
DOI 10.1074/jbc.M307969200
-
Meehan, W. J., Samant, R. S., Hopper, J. E., Carrozza, M. J., Shevde, L. A., Workman, J. L., Eckert, K. A., Verderame, M. F., and Welch, D. R. (2004) Breast cancer metastasis suppressor 1 (BRMS1) forms complexes with retinoblastoma-binding protein 1 (RBP1) and the mSin3 histone deacetylase complex and represses transcription. J. Biol. Chem. 279, 1562-1569 (Pubitemid 38082687)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.2
, pp. 1562-1569
-
-
Meehan, W.J.1
Samant, R.S.2
Hopper, J.E.3
Carrozza, M.J.4
Shevde, L.A.5
Workman, J.L.6
Eckert, K.A.7
Verderame, M.F.8
Welch, D.R.9
-
3
-
-
51749123590
-
Identification of chromatin remodeling genes Arid4a and Arid4b as leukemia suppressor genes
-
Wu, M. Y., Eldin, K. W., and Beaudet, A. L. (2008) Identification of chromatin remodeling genes Arid4a and Arid4b as leukemia suppressor genes. J. Natl. Cancer Inst. 100, 1247-1259
-
(2008)
J. Natl. Cancer Inst.
, vol.100
, pp. 1247-1259
-
-
Wu, M.Y.1
Eldin, K.W.2
Beaudet, A.L.3
-
4
-
-
13744250058
-
DNA-binding properties of ARID family proteins
-
DOI 10.1093/nar/gki145
-
Patsialou, A., Wilsker, D., and Moran, E. (2005) DNA-binding properties of ARID family proteins. Nucleic Acids Res. 33, 66-80 (Pubitemid 40276929)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.1
, pp. 66-80
-
-
Patsialou, A.1
Wilsker, D.2
Moran, E.3
-
5
-
-
0033602457
-
RBP1 induces growth arrest by repression of E2F-dependent transcription
-
Lai, A., Marcellus, R. C., Corbeil, H. B., and Branton, P. E. (1999) RBP1 induces growth arrest by repression of E2F-dependent transcription. Oncogene 18, 2091-2100 (Pubitemid 29178577)
-
(1999)
Oncogene
, vol.18
, Issue.12
, pp. 2091-2100
-
-
Albert, L.1
Marcellus, R.C.2
Corbeil, H.B.3
Branton, P.E.4
-
6
-
-
0025808021
-
Cloning of cDNAs for cellular proteins that bind to the retinoblastoma gene product
-
Defeo-Jones, D., Huang, P. S., Jones, R. E., Haskell, K. M., Vuocolo, G. A., Hanobik, M. G., Huber, H. E., and Oliff, A. (1991) Cloning of cDNAs for cellular proteins that bind to the retinoblastoma gene product. Nature 352, 251-254 (Pubitemid 21912329)
-
(1991)
Nature
, vol.352
, Issue.6332
, pp. 251-254
-
-
Defeo-Jones, D.1
Huang, P.S.2
Jones, R.E.3
Haskell, K.M.4
Vuocolo, G.A.5
Hanobik, M.G.6
Huber, H.E.7
Oliff, A.8
-
7
-
-
0035076249
-
RBP1 recruits the mSIN3-histone deacetylase complex to the pocket of retinoblastoma tumor suppressor family proteins found in limited discrete regions of the nucleus at growth arrest
-
DOI 10.1128/MCB.21.8.2918-2932.2001
-
Lai, A., Kennedy, B. K., Barbie, D. A., Bertos, N. R., Yang, X. J., Theberge, M. C., Tsai, S. C., Seto, E., Zhang, Y., Kuzmichev, A., Lane, W. S., Reinberg, D., Harlow, E., and Branton, P. E. (2001) RBP1 recruits the mSIN3-histone deacetylase complex to the pocket of retinoblastoma tumor suppressor family proteins found in limited discrete regions of the nucleus at growth arrest. Mol. Cell Biol. 21, 2918-2932 (Pubitemid 32244934)
-
(2001)
Molecular and Cellular Biology
, vol.21
, Issue.8
, pp. 2918-2932
-
-
Lai, A.1
Kennedy, B.K.2
Barbie, D.A.3
Bertos, N.R.4
Xiang, J.Y.5
Theberge, M.-C.6
Shih-Chang, T.7
Seto, E.8
Zhang, Y.9
Kuzmichev, A.10
Lane, W.S.11
Reinberg, D.12
Harlow, E.13
Branton, P.E.14
-
8
-
-
0032849352
-
RBP1 recruits both histone deacetylase-dependent and -independent repression activities to retinoblastoma family proteins
-
Lai, A., Lee, J. M., Yang, W. M., DeCaprio, J. A., Kaelin, W. G., Jr., Seto, E., and Branton, P. E. (1999) RBP1 recruits both histone deacetylase-dependent and -independent repression activities to retinoblastoma family proteins. Mol. Cell Biol. 19, 6632-6641 (Pubitemid 29441847)
-
(1999)
Molecular and Cellular Biology
, vol.19
, Issue.10
, pp. 6632-6641
-
-
Lai, L.1
Lee, J.M.2
Yang, W.-M.3
Decaprio, J.A.4
Kaelin Jr., W.G.5
Seto, E.6
Branton, P.E.7
-
9
-
-
0038642016
-
Identification and characterization of three new components of the mSin3A corepressor complex
-
DOI 10.1128/MCB.23.10.3456-3467.2003
-
Fleischer, T. C., Yun, U. J., and Ayer, D. E. (2003) Identification and characterization of three new components of the mSin3A corepressor complex. Mol. Cell Biol. 23, 3456-3467 (Pubitemid 36539178)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.10
, pp. 3456-3467
-
-
Fleischer, T.C.1
Yun, U.J.2
Ayer, D.E.3
-
10
-
-
77249162697
-
Streamlined analysis schema for high throughput identification of endogenous protein complexes
-
Malovannaya, A., Li, Y., Bulynko, Y., Jung, S. Y., Wang, Y., Lanz, R. B., O'Malley, B. W., and Qin, J. (2010) Streamlined analysis schema for high throughput identification of endogenous protein complexes. Proc. Natl. Acad. Sci. U.S.A. 107, 2431-2436
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 2431-2436
-
-
Malovannaya, A.1
Li, Y.2
Bulynko, Y.3
Jung, S.Y.4
Wang, Y.5
Lanz, R.B.6
O'Malley, B.W.7
Qin, J.8
-
11
-
-
33751086773
-
Deficiency of Rbbp1/ Arid4a and Rbbp1l1/Arid4b alters epigenetic modifications and suppresses an imprinting defect in the Prader-Willi/Angelman syndrome domain
-
Wu, M. Y., Tsai, T. F., and Beaudet, A. L. (2006) Deficiency of Rbbp1/ Arid4a and Rbbp1l1/Arid4b alters epigenetic modifications and suppresses an imprinting defect in the Prader-Willi/Angelman syndrome domain. Genes Dev. 20, 2859-2870
-
(2006)
Genes Dev.
, vol.20
, pp. 2859-2870
-
-
Wu, M.Y.1
Tsai, T.F.2
Beaudet, A.L.3
-
12
-
-
0035839136
-
Translating the histone code
-
DOI 10.1126/science.1063127
-
Jenuwein, T., and Allis, C. D. (2001) Translating the histone code. Science 293, 1074-1080 (Pubitemid 32758077)
-
(2001)
Science
, vol.293
, Issue.5532
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
13
-
-
78549287139
-
Keeping it in the family: Diverse histone recognition by conserved structural folds
-
Yap, K. L., and Zhou, M. M. (2010) Keeping it in the family: Diverse histone recognition by conserved structural folds. Crit. Rev. Biochem. Mol. Biol. 45, 488-505
-
(2010)
Crit. Rev. Biochem. Mol. Biol.
, vol.45
, pp. 488-505
-
-
Yap, K.L.1
Zhou, M.M.2
-
14
-
-
0037310947
-
The Tudor domain 'Royal Family': Tudor, plant Agenet, Chromo, PWWP and MBT domains
-
DOI 10.1016/S0968-0004(03)00004-5
-
Maurer-Stroh, S., Dickens, N. J., Hughes-Davies, L., Kouzarides, T., Eisenhaber, F., and Ponting, C. P. (2003) The Tudor domain "Royal Family:"Tudor, plant Agenet, Chromo, PWWP, and MBT domains. Trends Biochem. Sci. 28, 69-74 (Pubitemid 36165134)
-
(2003)
Trends in Biochemical Sciences
, vol.28
, Issue.2
, pp. 69-74
-
-
Maurer-Stroh, S.1
Dickens, N.J.2
Hughes-Davies, L.3
Kouzarides, T.4
Eisenhaber, F.5
Ponting, C.P.6
-
15
-
-
1842426648
-
An efficient system for small protein expression and refolding
-
DOI 10.1016/j.bbrc.2004.03.068, PII S0006291X04005601
-
Cheng, Y., and Patel, D. J. (2004) An efficient system for small protein expression and refolding. Biochem. Biophys. Res. Commun. 317, 401-405 (Pubitemid 38452497)
-
(2004)
Biochemical and Biophysical Research Communications
, vol.317
, Issue.2
, pp. 401-405
-
-
Cheng, Y.1
Patel, D.J.2
-
16
-
-
0033794003
-
NMR spectroscopy: A multifaceted approach to macromolecular structure
-
Ferentz, A. E., and Wagner, G. (2000) NMR spectroscopy: A multifaceted approach to macromolecular structure. Q. Rev. Biophys. 33, 29-65
-
(2000)
Q. Rev. Biophys.
, vol.33
, pp. 29-65
-
-
Ferentz, A.E.1
Wagner, G.2
-
17
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6, 277-293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
19
-
-
0032584781
-
Recommendations for the presentation of NMR structures of proteins and nucleic acids
-
DOI 10.1006/jmbi.1998.1852
-
Markley, J. L., Bax, A., Arata, Y., Hilbers, C. W., Kaptein, R., Sykes, B. D., Wright, P. E., and Wüthrich, K. (1998) Recommendations for the presentation of NMR structures of proteins and nucleic acids. J. Mol. Biol. 280, 933-952 (Pubitemid 28345026)
-
(1998)
Journal of Molecular Biology
, vol.280
, Issue.5
, pp. 933-952
-
-
Markley, J.L.1
Bax, A.2
Arata, Y.3
Hilbers, C.W.4
Kaptein, R.5
Sykes, B.D.6
Wright, P.E.7
Wuthrich, K.8
-
20
-
-
77955423898
-
Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain
-
Kim, D., Blus, B. J., Chandra, V., Huang, P., Rastinejad, F., and Khorasanizadeh, S. (2010) Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain. Nat. Struct. Mol. Biol. 17, 1027-1029
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1027-1029
-
-
Kim, D.1
Blus, B.J.2
Chandra, V.3
Huang, P.4
Rastinejad, F.5
Khorasanizadeh, S.6
-
21
-
-
0031576336
-
Torsion angle dynamics for NMR structure calculation with the new program DYANA
-
Güntert, P., Mumenthaler, C., and Wüthrich, K. (1997) Torsion angle dynamics for NMR structure calculation with the new program DYANA. J. Mol. Biol. 273, 283-298
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 283-298
-
-
Güntert, P.1
Mumenthaler, C.2
Wüthrich, K.3
-
22
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Crystallography and NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54, 905-921
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
23
-
-
0035029325
-
SANE (Structure Assisted NOE Evaluation): An automated model-based approach for NOE assignment
-
DOI 10.1023/A:1011227824104
-
Duggan, B. M., Legge, G. B., Dyson, H. J., and Wright, P. E. (2001) SANE (Structure Assisted NOE Evaluation): An automated model-based approach for NOE assignment. J. Biomol. NMR 19, 321-329 (Pubitemid 32401471)
-
(2001)
Journal of Biomolecular NMR
, vol.19
, Issue.4
, pp. 321-329
-
-
Duggan, B.M.1
Legge, G.B.2
Dyson, H.J.3
Wright, P.E.4
-
25
-
-
0033003335
-
Protein backbone angle restraints from searching a database for chemical shift and sequence homology
-
DOI 10.1023/A:1008392405740
-
Cornilescu, G., Delaglio, F., and Bax, A. (1999) Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J. Biomol. NMR. 13, 289-302 (Pubitemid 29143535)
-
(1999)
Journal of Biomolecular NMR
, vol.13
, Issue.3
, pp. 289-302
-
-
Cornilescu, G.1
Delaglio, F.2
Bax, A.3
-
26
-
-
21044449889
-
RECOORD: A recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank
-
DOI 10.1002/prot.20408
-
Nederveen, A. J., Doreleijers, J. F., Vranken, W., Miller, Z., Spronk, C. A., Nabuurs, S. B., Güntert, P., Livny, M., Markley, J. L., Nilges, M., Ulrich, E. L., Kaptein, R., and Bonvin, A. M. (2005) RECOORD: A recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank. Proteins 59, 662-672 (Pubitemid 40695843)
-
(2005)
Proteins: Structure, Function and Genetics
, vol.59
, Issue.4
, pp. 662-672
-
-
Nederveen, A.J.1
Doreleijers, J.F.2
Vranken, W.3
Miller, Z.4
Spronk, C.A.E.M.5
Nabuurs, S.B.6
Guntert, P.7
Livny, M.8
Markley, J.L.9
Nilges, M.10
Ulrich, E.L.11
Kaptein, R.12
Bonvin, A.M.J.J.13
-
27
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
DOI 10.1016/0263-7855(96)00009-4
-
Koradi, R., Billeter, M., and Wuthrich, K. (1996) MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14, 51-55 (Pubitemid 26152976)
-
(1996)
Journal of Molecular Graphics
, vol.14
, Issue.1
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wuthrich, K.3
-
28
-
-
0030339738
-
AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
-
Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR. J. Biomol. NMR 8, 477-486 (Pubitemid 126706801)
-
(1996)
Journal of Biomolecular NMR
, vol.8
, Issue.4
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmann, J.A.C.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
29
-
-
77954288774
-
Dali server: Conservation mapping in 3D
-
Holm, L., and Rosenström, P. (2010) Dali server: Conservation mapping in 3D. Nucleic Acids Res. 38, W545-549
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Holm, L.1
Rosenström, P.2
-
30
-
-
79952944310
-
Structure and mechanisms of lysine methylation recognition by the chromodomain in gene transcription
-
Yap, K. L., and Zhou, M. M. (2011) Structure and mechanisms of lysine methylation recognition by the chromodomain in gene transcription. Biochemistry 50, 1966-1980
-
(2011)
Biochemistry
, vol.50
, pp. 1966-1980
-
-
Yap, K.L.1
Zhou, M.M.2
-
31
-
-
65249151919
-
Structure and function of histone methylation binding proteins
-
Adams-Cioaba, M. A., and Min, J. (2009) Structure and function of histone methylation binding proteins. Biochem. Cell Biol. 87, 93-105
-
(2009)
Biochem. Cell Biol.
, vol.87
, pp. 93-105
-
-
Adams-Cioaba, M.A.1
Min, J.2
-
32
-
-
61349131438
-
Molecular basis of the interaction of Saccharomyces cerevisiae Eaf3 chromodomain with methylated H3K36
-
Sun, B., Hong, J., Zhang, P., Dong, X., Shen, X., Lin, D., and Ding, J. (2008) Molecular basis of the interaction of Saccharomyces cerevisiae Eaf3 chromodomain with methylated H3K36. J. Biol. Chem. 283, 36504-36512
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 36504-36512
-
-
Sun, B.1
Hong, J.2
Zhang, P.3
Dong, X.4
Shen, X.5
Lin, D.6
Ding, J.7
-
33
-
-
55249111484
-
Structural basis for the recognition of methylated histone H3K36 by the Eaf3 subunit of histone deacetylase complex Rpd3S
-
Xu, C., Cui, G., Botuyan, M. V., and Mer, G. (2008) Structural basis for the recognition of methylated histone H3K36 by the Eaf3 subunit of histone deacetylase complex Rpd3S. Structure 16, 1740-1750
-
(2008)
Structure
, vol.16
, pp. 1740-1750
-
-
Xu, C.1
Cui, G.2
Botuyan, M.V.3
Mer, G.4
-
34
-
-
77951977878
-
Molecular basis of histone H3K36me3 recognition by the PWWP domain of Brpf1
-
Vezzoli, A., Bonadies, N., Allen, M. D., Freund, S. M., Santiveri, C. M., Kvinlaug, B. T., Huntly, B. J., Göttgens, B., and Bycroft, M. (2010) Molecular basis of histone H3K36me3 recognition by the PWWP domain of Brpf1. Nat. Struct. Mol. Biol. 17, 617-619
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 617-619
-
-
Vezzoli, A.1
Bonadies, N.2
Allen, M.D.3
Freund, S.M.4
Santiveri, C.M.5
Kvinlaug, B.T.6
Huntly, B.J.7
Göttgens, B.8
Bycroft, M.9
-
35
-
-
36448949026
-
Multivalent engagement of chromatin modifications by linked binding modules
-
DOI 10.1038/nrm2298, PII NRM2298
-
Ruthenburg, A. J., Li, H., Patel, D. J., and Allis, C. D. (2007) Multivalent engagement of chromatin modifications by linked binding modules. Nat. Rev. Mol. Cell Biol. 8, 983-994 (Pubitemid 350174643)
-
(2007)
Nature Reviews Molecular Cell Biology
, vol.8
, Issue.12
, pp. 983-994
-
-
Ruthenburg, A.J.1
Li, H.2
Patel, D.J.3
David, A.C.4
-
36
-
-
11244271837
-
Sin3: A flexible regulator of global gene expression and genome stability
-
DOI 10.1007/s00294-004-0541-5
-
Silverstein, R. A., and Ekwall, K. (2005) Sin3: A flexible regulator of global gene expression and genome stability. Curr. Genet. 47, 1-17 (Pubitemid 40069110)
-
(2005)
Current Genetics
, vol.47
, Issue.1
, pp. 1-17
-
-
Silverstein, R.A.1
Ekwall, K.2
-
37
-
-
13444307044
-
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
-
DOI 10.1107/S0907444904026460
-
Krissinel, E., and Henrick, K. (2004) Secondary structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr. D Biol. Crystallogr. 60, 2256-2268 (Pubitemid 41742778)
-
(2004)
Acta Crystallographica Section D: Biological Crystallography
, vol.60
, Issue.12 I
, pp. 2256-2268
-
-
Krissinel, E.1
Henrick, K.2
|