Isolation and characterization of 3-nitrophenol-degrading bacteria associated with rhizosphere of Spirodela polyrrhiza

Environmental Science and Pollution Research

Volumn 19, Issue 5, 2012, Pages 1852-1858

  Kristanti, Risky Ayu ^a   Kanbe, Masahiro ^a   Hadibarata, Tony ^b   Toyama, Tadashi ^a   Tanaka, Yasuhiro ^a   Mori, Kazuhiro ^a  

^a UNIVERSITY OF YAMANASHI   (Japan)

^b UNIVERSITI TEKNOLOGI MALAYSIA   (Malaysia)

Author keywords

Accelerated removal; Aquatic plant; Giant duckweed; Nitroaromatic; Rhizoremediation; River water

Indexed keywords

3 NITROPHENOL; 3-NITROPHENOL; FRESH WATER; NITROPHENOL; RNA 16S;

ADSORPTION; AQUATIC PLANT; BACTERIUM; BIODEGRADATION; BIOLOGICAL UPTAKE; BIOREMEDIATION; DEVELOPMENTAL BIOLOGY; GENETIC ANALYSIS; HABITAT TYPE; PHENOL; PHYLOGENETICS; REMEDIATION; RHIZOSPHERE; RIVER WATER; SURFACE WATER; WEED;

ARACEAE; ARTICLE; BIOREMEDIATION; CUPRIAVIDUS; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PSEUDOMONAS; RHIZOSPHERE; RIVER;

ARACEAE; BIODEGRADATION, ENVIRONMENTAL; CUPRIAVIDUS; FRESH WATER; MOLECULAR SEQUENCE DATA; NITROPHENOLS; PHYLOGENY; PSEUDOMONAS; RHIZOSPHERE; RIVERS; RNA, RIBOSOMAL, 16S;

BACTERIA (MICROORGANISMS); CUPRIAVIDUS; LEMNA; PSEUDOMONAS; SPIRODELA POLYRRHIZA;

EID: 84863227060     PISSN: 09441344     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11356-012-0836-x     Document Type: Article

References (24)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Bio 215: 403-410.
2. Badri DV, Weir TL, Lelie DVD, Vivanco JM (2009) Rhizosphere chemical dialogues: plant-microbe interactions. Curr Op Biotech 20(6): 642-650.
3. Chaudhry Q, Blom-Zandstra M, Gupta S, Joner EJ (2005) Utilising the synergy between plants and rhizosphere microorganisms to enhance breakdown of organic pollutants in the environment. Environ Sci Pollut Res 12: 34-48.
4. Duker AA, Hale M (2007) Environmental research at the leading edge. Nova Science Publisher, Inc, New York.
5. Eapen S, Singh S, D'Souza SF (2007) Phytoremediation of metals and radionuclides. In: Singh SN, Tripathi RD (eds) Environmental bioremediation technologies. Springer, Berlin.
6. Jouanneau Y, Willison JC, Meyer C, Krivobok S, Chevron N, Besombes J-L, Blake G (2005) Stimulation of pyrene mineralization in freshwater sediments by bacterial and plant bioaugmentation. Environ Sci Technol 39: 5729-5735.
7. Meulenberg R, Pepi M, de Bont JAM (1996) Degradation of 3-nitrophenol by Pseudomonas putida B2 occurs via 1, 2, 4-benzenetriol. Biodegradation 7: 303-311.
8. Mori K, Toyama T, Sei K (2005) Surfactant degrading activities in the rhizosphere of giant duckweed (Spirodela polyrrhiza). Jpn J Wat Treat Biol 41: 129-140.
9. Mueller KE, Shann JR (2007) Effects of tree root-derived substrates and inorganic nutrients on pyrene mineralization in rhizosphere and bulk soil. J Environ Qual 36: 120-127.
10. Navratilova J, Tvrzova L, Durnova E, Sproer C, Sedlacek I, Neca J, Nemec M (2005) Characterization of Rhodococcus wratislaviensis strain J3 that degrades 4-nitrocatechol and other nitroaromatic compounds. Antonie van Leeuwenhoek 87(2): 149-535.
11. Ogihara H, Kawarai T, Furukawa S, Miyao S, Yamasaki M (2009) Microfloral and chemical changes of salted pickles (Suguki) during its manufacturing process. Jpn J Food Microbiol 26(2): 98-106.
12. Schenzle A, Lenke H, Fischer P, Williams P, Knackmuss HJ (1997) Catabolism of 3-NP by Ralstonia eutropha JMP134. Appl Environ Microbiol 63: 1421-1427.
13. Shaw LJ, Burns RG (2003) Biodegradation of organic pollutants in the rhizosphere. Adv Appl Microbiol 53: 1-60.
14. Shukla KS, Singh NK, Sharma S (2010) Bioremediation: developments, current practices and perspectives. Gen Eng Biotech J GEBJ-3.
15. Spain JC (1995) Biodegradation of nitro-aromatic compounds. Ann Rev Microbiol 49: 523-555.
16. Toyama T, Yu N, Kumada H, Sei K, Ike M, Fujita M (2006) Accelerated aromatic compounds degradation in aquatic environment by use of interaction between Spirodela polyrrhiza and bacteria in its rhizosphere. J Biosci Bioeng 101: 346-353.
17. Toyama T, Sato Y, Inoue D, Sei K, Chang Y-C, Kikuchi S, Ike M (2009a) Biodegradation of bisphenol A and bisphenol F in the rhizosphere sediment of Phragmites australis. J Biosci Bioeng 108: 147-150.
18. Toyama T, Sei K, Yu N, Kumada H, Inoue D, Hoang H, Soda S, Chang Y-C, Kikuchi S, Fujita M, Ike M (2009b) Enrichment of bacteria possessing catechol dioxygenase genes in the rhizosphere of Spirodela polyrrhiza: a mechanism of accelerated biodegradation of phenol. Wat Res 43: 3765-3776.
19. Toyama T, Furukawa T, Maeda N, Inoue D, Sei K, Mori K, Kikuchi S, Ike M (2011) Accelerated biodegradation of pyrene and benzo[a]pyrene in the Phragmites australis rhizosphere by bacteria-root exudate interactions. Wat Res 45: 1629-1638.
20. USEPA (1980) Ambient water quality criteria for nitrophenol. EPA 44 C-6-8 C-063.
21. WHO (2000) Concise international chemical assessment document 20, mononitrophenols.
22. Yamaga F, Washio K, Morikawa M (2010) Sustainable biodegradation of phenol by Acinetobacter calcoaceticus P23 isolated from the rhizosphere of duckweed Lemna aoukikusa. Environ Sci Technol 44: 6470-6474.
23. Yi H, Crowley DE (2007) Biostimulation of PAH degradation with plants containing high concentrations of linoleic acid. Environ Technol 41: 4382-4388.
24. Zhao JS, Ward OP (2000) Cometabolic biotransformation of nitrobenzene by 3-nitrophenol degrading Pseudomonas putida 2NP8. Can J Microbiol 46(7): 643-652.