Analysis of Bacterial Community in the Ginseng Soil Using Denaturing Gradient Gel Electrophoresis (DGGE)

Indian Journal of Microbiology

Volumn 52, Issue 2, 2012, Pages 286-288

  Vendan, Regupathy Thamizh ^a   Lee, Sun Hee ^b   Yu, Young Joon ^b   Rhee, Young Ha ^b  

^a TAMIL NADU AGRICULTURAL UNIVERSITY   (India)

^b Chungnam National University   (South Korea)

Author keywords

Bacterial community; DGGE; Korean ginseng soil

Indexed keywords

ACTINOBACTERIA; ACTINOMYCETALES; ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); PANAX GINSENG; RHIZOBIALES;

EID: 84863188862     PISSN: 00468991     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12088-011-0193-3     Document Type: Article

References (6)

1. Ercolini D (2004) PCR-DGGE fingerprinting: novel strategies for detection of microbes in food. J Microbiol Methods 56: 297-314.
2. Yu WJ, Lee BJ, Nam SY, Yang DC, Yun YW (2003) Modulating effects of Korean ginseng saponins on ovarian function immature rats. Biol Pharm Bull 26: 2574-2580.
3. Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59: 695-700.
4. Griffiths BS, Ritz K, Ebblewhite N, Dobson G (1999) Soil microbial community structure: effects of substrate loading rates. Soil Biol Biochem 31: 145-153.
5. EPdeB Ferreira, Dusi AN, Xavier GR, Rumjanek NG (2008) Rhizosphere bacterial communities of potato cultivars evaluated through PCR-DGGE profiles. Pesq agropec bras Brasília 43: 605-612.
6. Kim MS, Ahn JH, Jung MK, Yu JH, Joo DH, Kim MC, Shin HC, Kim TS, Ryu TH, Kweon SJ, Kim TS, Kim DH, Ka JO (2005) Molecular and cultivation-based characterization of bacterial community structure in rice field soil. J Microbiol Biotechnol 15: 1087-1093.